Os09g0489500
| Gene Name |
Os09g0489500 |
|---|---|
| Description |
Similar to Transcription factor HBP-1b(C38) (Fragment) |
| Version |
NM_001070069.1 GI:115479880 GeneID:4347436 |
| Length |
9095 bp |
| Definition |
Oryza sativa Japonica Group Os09g0489500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:19522191..19531285 |
| Sequence Coding Region |
19522511..19522705,19524749..19524988,19526453..19526839,19526963..19527040,19527252..19527311 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:19522191..19531285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:19522191..19531285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatgagcgggagcgagagccagcaggagagggagcatcgtcagcagcaggagatgaacatctcctttgggatgatgatgaaccatggccaccatcactacggacagcatcagcagcagcaccatcatcatccgcctccgtcatcgtcttcctcttcctccatgcatgccgctgccgcaagcttcatcaaggaggcatctgcaggagcttatgatcatctgggggagctggaccaggccttgttcatgtacctggatcatggcagccatgcggcgtcgcaccaagaacaaaggcagaccctcaacatcttcccttcccagcccatgcatgtggagccatcacccaagggagagattagtttagtgctgtccccagcagctgtgggaaccaagatggcgaggtcacctgatcatcaccaccaccatcagcagcaagcagcagcagccatggaggagttggcgacagggagcaggagacaggatcaccaccacctgcagcaccaacctttcgctgctgagcctgcagggatcaacagggatgtgaagccggtgacagccaagaaggatcacaggaggggtgtatctactggtgaacgcgacccaaagacgctgaggaggctagcccagaacagggaggcagcaaggaaaagcaggctaaggaagaaggcttacatccagcagctggagtccagcaggatcaggcttgctcagctcgaacaggaactgcacaccgcgagagcccagggggtgttcttccccggcagcggcgggctgatcggcgagggaggcagcgggaagggggtcctgctgggcgggatcgatggcgtcggcggcggcggcggcggggggctgagctcggaggcggcgatgttcgacgtggagtacgggaggtggcaggaggagcaccaccggctgatgtacgagctgcgggcggcgctgcagcagcagctgccggagggggagctgcaggtgtacgtggagagctgcctggcgcaccacgacgaggtcgccgccatcaaggacggcgccatcaggggcgacgtcttccacctcatctccggcgtctggatgagcccagccgagcgctgcttcctctggctcggcggcttccgcccctccgaggtcatcaagatgctggtggcgcacgtggagccgctgacggagcagcagatcgtgggggtgtacgggctgcagcagtcggcgctggagacggaggaggcgctgacgcagggcctcgacgcgctctaccagtcgctctccgacaccgtcgtctccgacgccctcagctgcccttccaacgtcgccaactacatgggccagatggccgtcgccatcaacaagctctccaccctcgagggcttcgtccgccaggctgagaacctgaggcagcagacgctgcaccggctgcagcaggtgctgacgacgaggcagatggcgcggtcgctgctcgccgtctccgactacttccaccgcctccgcaccctcagctccctctgggtcacccgccccaggcacccgcctcacgaccaccagccgccgccgcactccgccgccccccacacctga</cdnaseq> |
| Protein Sequence |
<aaseq>MMSGSESQQEREHRQQQEMNISFGMMMNHGHHHYGQHQQQHHHH PPPSSSSSSSMHAAAASFIKEASAGAYDHLGELDQALFMYLDHGSHAASHQEQRQTLN IFPSQPMHVEPSPKGEISLVLSPAAVGTKMARSPDHHHHHQQQAAAAMEELATGSRRQ DHHHLQHQPFAAEPAGINRDVKPVTAKKDHRRGVSTGERDPKTLRRLAQNREAARKSR LRKKAYIQQLESSRIRLAQLEQELHTARAQGVFFPGSGGLIGEGGSGKGVLLGGIDGV GGGGGGGLSSEAAMFDVEYGRWQEEHHRLMYELRAALQQQLPEGELQVYVESCLAHHD EVAAIKDGAIRGDVFHLISGVWMSPAERCFLWLGGFRPSEVIKMLVAHVEPLTEQQIV GVYGLQQSALETEEALTQGLDALYQSLSDTVVSDALSCPSNVANYMGQMAVAINKLST LEGFVRQAENLRQQTLHRLQQVLTTRQMARSLLAVSDYFHRLRTLSSLWVTRPRHPPH DHQPPPHSAAPHT</aaseq> |
| Gene Sequence |
<dnaseqindica>8581..8775#6298..6537#4447..4833#4246..4323#3975..4034#3773..3817#3398..3610#3197..3249#1824..1930#511..698#gatgcagagggagcatggagccaaacagaaagtctgtttcgccattaatggctctcccactcacctctctctctagaaacacatagccaagatcatcatcatcagcaaccatattagtgaattaagaggaaatcaaagcagtagcagcccaggaacagcatcatcaaagcagtaagagagggtagtttgcaagtggtgctagtgtccaaggcgccatcacgaactagagtcctagatagagctagaggtcatgcatggggtagttgctggtgtggaagaggaagagagaaagtgagtgagagagagagaggtggcgccttggctgctagcctcatagagtcaaagagtatttaggaccttgcagctatggctatagatagatagaggcacatacgcatacgtatatagcttgctaccttgccttctctgtgtatgtttcggcgtgtgttcttcttcttctcttcttcctcctctcgattctgaagaggttagctttgatttgatcgatcgatgatgagcgggagcgagagccagcaggagagggagcatcgtcagcagcaggagatgaacatctcctttgggatgatgatgaaccatggccaccatcactacggacagcatcagcagcagcaccatcatcatccgcctccgtcatcgtcttcctcttcctccatgcatgccgctgccgcaagcttcatgtacggctttgtttactgaatctctctccctctctctctctctctctgatttgtttgatgcatatatatgtgtgtctctttcttgttcttgatttgggccgtgtcttggagtttgattttgatctctgatttgttagtcatgatcatgcatggtttgttttggtttggttcttttttcttgcttgctctctttgtttctgctggttcttctgatctcttttttgccatggtttcctcttcttcttctccttcttctttttatggaaactgctttaatttcctcttctcctcctcctcctcttttaacaaaacactagccatggagaaactaggttaccaataatcttcttgtggactgaattttgcattctactgttctacatgttgaagattttgcttctttttttgctagaattttgcattttacatgcagacgattttgcctttttgcttcctggttgggaattcagtgattgtttgagcggatgcaaacagatcggtccttttctcttccttcttcctctccccccaagaaaaaaaaagttagacgatgatcaaacaagttcagatttaaaaattcagtacttgtgatttaatatctggagccagatatagttgaattgttgcaacaactcgctagtctttctttcaaattttgggaggtcagcgattcatttccgcataagtacaagagcattacctaagacatatttatgaccaactgatcatacatatctgcccaagtttttacatttaatttacagtgagcatgacttgcacacatgaaatttggagagtacatggccatgcttattttctgggctgtgccaaaataaatgctacaaaggtagagtagattcatattattcttctgctcctactcttgcagtcttgcagaggttggaccagacaaataattaatatagcatcatacataattggcttatagaagcatgatttcatgatgatgtgtgatgccttcactacttcctcaaccttgtgcatgcatgctactatactacctgcatctatctcacacatacatatagctatacctcatcaccaacaattttgcttcttgtgctgctcctaattttgcttcttgtgttgcaccaccaggagcagcaaggaggcatctgcaggagcttatgatcatctgggggagctggaccaggccttgttcatgtacctggatcatggcagccatgcggcgtcgcaccaagaacaaaggcgtacgtatacgaaaaaaacccgtaaattttaattcgccaaccgaaaaatcaccacaaattttctcaaacatgcattcaccatatatatttccttgcaaaaagttcagattttttttttcaaagagtattaatgcaggtgatgagatcagtagtaacagttttcagttgttcttcttttggcatttagcattagtagtaataatagcataataacagcagtatatatagcttaggcacagaaacaaatgtgccaagcatacacagggagtagcagtaggctgtagtataggaggaggagggatatattcctatggttgcagaaagttgcatcctttttctggggtcatcagaaacgatcatggtatacggccggccggcctgcatgcagcagattctcaggtactccattttgaccaggatatctgctagctgcaacaaatctctgcagtactactactgctactactaccactgcactcctgtggagatcacacatctcaggaccagggaatcagcaacccaaagtccatgcatatgaaaccaacaatctctctagctatacctctctcttccctctctctctctctctctatctctgactgctaagatctggccggctggtttggactgtgacatgtaacaaactgctcaatgatttcgccgagatcgagctgcatctgcatgtggcctggtgcagagaaagagggacgtacacacacacgccgaagagatgatcgatcaatccccatgctactgatcgttcttgttgctgctactagctaggagtagtagcaagatgtgcacatttgttcgagtttgacccgatcgatgctatccacttctgttgtttccagcttcaggttacagtgatcagtgttgcagtgtagcagcagctagctgtgcagctgtgtgatatctgtccttggctcccgtatctctcgtagcccccagctttctcgtgttgcctgtgtgcctgcagtactgcagctatagctagctttggacgtacctagcatgcatatatagtacacactactctctgccatgcaaagcatgatgaatttgagcagcagcagcagtagcacagtagtgtcttgttccagctgcatgcctgcatatatacagcctagctctcttcttcagtagagttttcagtagcaattcgatcagtttgtgagttgtggtgtgtgagtctccagggttagctggtcttctgcttttgctcgatcgatctcttgatttgtgttgtgctcatggatgatgcagagaccctcaacatcttcccttcccagcccatgcatgtggagccatcacccaaggtatttaattaattttacttactttcatctgaatctcacattggttatgtcatttgtcttttcaatgtagcactcgtgtgtagtatatatgaaatcaaagattggtttaatgtttgtggatgtgatgattgattgattgatttggcagggagagattagtttagtgctgtccccagcagctgtgggaaccaagatggcgaggtcacctgatcatcaccaccaccatcagcagcaagcagcagcagccatggaggagttggcgacagggagcaggagacaggatcaccaccacctgcagcaccaacctttcgctgctgagcctgcagggatcaacagggatgtgaagccggtgacagccaaggtcagcatcatcacttaaccacttaattaaccaactaatatctaaccctgctagctaaagaaaacaccctgattaatctattcagaacactgtccttgattgtttttatgttttagcttacattaatgtgcatattgtttatgtttttttttattattgcagaaggatcacaggaggggtgtatctactggtgaacgcgacccaaaggtactatactagtgatattctcaagaaataattagagattagttgttgttctctttttgtgcatatcagttgagttaaggacaatactaaaaatgatttggtctgatcatgcttacttttttgcgtatcattttgtgattaatgtaaatatatgcagacgctgaggaggctagcccagaacagggaggcagcaaggaaaagcaggctaaggaagaaggtgagtgaagcaaaattaaacagtaattaaacacagaaagaaaaagaagaaaatgacaggctatatatattcaatatattcagaacaaaagcaatcacccaaatttgatcaaattaaaccaaattaattttgctagttaattactaccactcttcttcaattcagccactgtggattaattactttactgaaattttgactgaaacgacaggcttacatccagcagctggagtccagcaggatcaggcttgctcagctcgaacaggaactgcacaccgcgagagcccaggtaggcgaatttcataatttcaaattcgagcaaaattcaaactgcacccaaatcaaatcaaacacaaccaattcggattatgtattatggatgaaaatgtgtacggatctatacatggtgcagggggtgttcttccccggcagcggcgggctgatcggcgagggaggcagcgggaagggggtcctgctgggcgggatcgatggcgtcggcggcggcggcggcggggggctgagctcggaggcggcgatgttcgacgtggagtacgggaggtggcaggaggagcaccaccggctgatgtacgagctgcgggcggcgctgcagcagcagctgccggagggggagctgcaggtgtacgtggagagctgcctggcgcaccacgacgaggtcgccgccatcaaggacggcgccatcaggggcgacgtcttccacctcatctccggcgtctggatgagcccagccgagcgctgcttcctctggctcggcggcttccgcccctccgaggtcatcaaggtacgctactatgcactccccccgccatggattggcttggattggattaaccctaaccctagatgctcgtagcgattgacaatggcttcgtcgggaggtagaagacaaacggaacaaagtggggaaaaaataatttggattatgctttgaaacccctcgaatatttttatattgcgtattagtccctcaaaagaaaataaaagaatttacataaacaaccttaactagctcgggtcttcagagtgatgaagaaaaatgtcgcatgaaaaaagtttgcgcatttctaattttgatcaacatgaaaaaagtaacttatcgaaaacaatttcgataagaaaattgaaaatatataatacttagcctcactatataaaaaatgatttctattgatgccccctccgactgcattgacaatccataagggtcgtgtcattgatcgcatacgaaaacgtagtttcatatatggctgacttaaggtggccgcacacgtggttgagttaagccaactgcttgtggaatgtgataattttctacatgtgaaaattttcattggccttctgttaggggggcgattccgtcttttgcaaatgcatcctagccgtctgtaaaggaaaatgtctttttttttaaaaaaaaaaacaatgtcgatagtaaaccctattttagtttagtacttgtttataatacgaaacggagagagtattagcagcattggcaccttaattatatgggtcgcggaggcagtgaataatattcatgtgacaaaagccaaaacacacaccttgttattgtcgtttccagcaatgggtaggagaagttgtgcacttgctcggcaagctcatcataccctctccctccatggagagagctggacgacgacaacgagtagtggatggatagctagcttcatcgatctgtcgcgctcgcgcgcgtgcgagcattccccgccatcttcgcgaccgcgtgggcgcatgcgtcgatcgaatcgatcgatatatcgacgcattgaatgatcgatctgatcataatcagatcaggaaactgggatttcagcttttcaagccgggccacaactgaatccaaccaaatgttgtagaactgtacgtacgtacgtagcagtactgataaaccaacaaaaaccattacggattcaggatttacctacattcgtttcgaatctgttacgattaattgtgctgggtttttcagtgtaattaaactgctccatcgatcgcgtatactgaactgttatatcagctgctatcacagtacctgcattgacatatactataactcctgaatgaatatctgaatatctgatcactagctgacagagcaacagtttgtgtgcatttgttctcttcttttttgctcgattgcatgactgaattcgtgatgtgattaatgtgattggattgattaataagtagtaattgtgatcaatgtggattggaggggatgcagatgctggtggcgcacgtggagccgctgacggagcagcagatcgtgggggtgtacgggctgcagcagtcggcgctggagacggaggaggcgctgacgcagggcctcgacgcgctctaccagtcgctctccgacaccgtcgtctccgacgccctcagctgcccttccaacgtcgccaactacatgggccagatggccgtcgccatcaacaagctctccaccctcgagggcttcgtccgccaggtaccctaccttgcgtgattctcacacactgtctgcatcttcttctctcatgatttgatcgagctcagtaaccaaaccataccaaattaccaacccttcttgcaatcagttcagtcatgcattgcatgcactcttcatcatcagttagttggtttctcttcagttccatcagttgtaggcccatttgtacttcctcctcttacagattaattactccctccgtcctataatataatggattttaagtttttgcttgcaacgtttgaccactcgtcttattcaaatttttttggaattattatttattttatttgtgacttactttattatctacagtactttaagcacaacttttcgttttttatatttgcaaaaaaaatttgaataagacgagtggtcaaacgttgcaaacaaaaactcaaaatcccttatattgtgggacggagggagtattgattatcgcactacactttccaagctgctgaacaatacgatttttttttcaagaaattatatatagattgcctagaatttttttttaataaaagccacattttaactttataatagttaattcattcgtttgtacgtcgagtatctcaagaatagtcagataatataccatctgttcatttaattattcggaacaataaaactgggttgtactacatgtttatgactttattatagtttatttgttagttaatctcctgtcacttcgatggattagttagagctggagccaatgggagaagatcacatatatttgttagtagttgagaaggttcaatggatagttcacctaattgaaatcgacactgcaatactgaatatgttcatgattaaattagataattgctgtcgcctagctaggtgttgtgtcgatcgatcgacagagaagcatatgtggattaggtttttcagcttttgaaaagcacccgactgtctccatcccagaaacgggagagagcagaggttggatttgatataaaaaccctgaaaaggctgtgtaacaaacaccacaaacatgtataatttatgagggtttattgcttgactaattgttagtttgttcatcggtctttccatgttgggtagatgtgcctggctgctcggtttttataggccgcccttcacctgctcatggatgccacaaacagatcgaccacacatttcatttcatatcacactttgcaacttgcttaattggttactgtttgtgcttagtataattaatcagccaactaattaatgatgtccacgtatgtgtaaagtaatattcctacaatgcgtgtaactagttgttgctttttttttacaattaaaatatataggaggataacttcttatatccatttgagatgcaagtatgaattaatatatgttttgtttttgaaaatagaaatgatttagttccagcctatagtctcttatcgtctatttgttttcttatcatccgcgtctaaaatataatcttagagttgaatttgcaaaactatcattcgagtggcatccttttaaaattagaaaaaaccagtgacaaatttacaaacgtccaatatttatttttacttttatatcgtggattgcacgaatatataatagttttaccatatataactccaactccactccaaagtcttcaactaactgtgcttctggatgattagctgctgattttggcatgacggtggcaaagcatcagacattccgacaagctaagagcaaggctaataagacaaccagttatttagttgtttactgtatagatctttatggtctatatctcagcttacttataaagtggttagctcttcactatagatatatagtccacctgtctgtctcatagatttttttagttttttttgcctaagtcggctgtaagcttacagtcccgtttctcatctctctctctcctttcctctctcatctatctcagcattcagtcttcttatagcgctctattatacttactctaaatagctcgtgcatgattagtagatttaattctaatgtaattaattaactggatatatgcaggctgagaacctgaggcagcagacgctgcaccggctgcagcaggtgctgacgacgaggcagatggcgcggtcgctgctcgccgtctccgactacttccaccgcctccgcaccctcagctccctctgggtcacccgccccaggcacccgcctcacgaccaccagccgccgccgcactccgccgccccccacacctgagatcaccgccgccggcaacgcatgcaaacaccgtagctcttagctagcagcttagagatatcgagagatcagaaattaagcgatcgatcgagagaggacgacgactgtgaaaccccccatggaatggatggatggatggatggatgaaccgatgtgtactgtgtttgggcattaaccctttgatgtaaacaaagtaggcgtgtttgactgcttggtcgatcgatcgagatctctgtcgataggatcttgaattagcggatcttacctcagcagctggttcatcaagtgttgatgcagctcaatcaaactttttcctgatg</dnaseqindica> 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