BGIOSGA025009

From RiceWiki
Revision as of 16:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025009

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025009, complete gene.

LocusTag

OsI_24593

Ensembl Transcript ID

BGIOSGA025009-TA

Ensembl Protein ID

BGIOSGA025009-PA

Length

2444

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:336245..338688

Sequence Coding Region

336245..337918,338002..338688

Genome Context

<gbrowseImage1> name=IndicaChromosome07:336245..338688 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:336245..338688 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTTCAATCCGCCGGTGCCGCAGAATGACAGCGACTGGGAGATCCGGGTGGCTGTGCTGCTCAGCCTCACCCTCCAGATTCTCCTCATCTTCGTGGGGCCCATGCGCAAGCGCTCCTCCCACCCTGTCCCGCGCTTCGCCGTCTGGTCGTGCTACCTCCTCGCCGACTGGGTCGCCGACCTCGGCCTCGGCCTCCTCCTCAACAACCTCGGCAACATCAGCGGCGGCAACGGATCCTCCTCCTCCTCTAGCAGCAGCAGCATCAGCCACCTCTCGGCCGGTGTCGGCGGCTTCAAGCGTGGGCCCGGCGGCGGCAGCACCAACAACACATCCTCCGGCGGCGGCAGCCCGCCCATCTTCGCCTTCTGGACTCCATTCCTGCTGCTCCACCTGGGCGGCCCGGACACCATCACCGCCTACTCCCTCGAGGACAACGAGCTCTGGCTCCGCCACTTGATTGGCTTGCTCTTCGAGCTCTTCTCCGCCTTTGTCGTCTTCTCCTGCTCCGTCAAGTCCAACCCCATGGTCCCGGCCACCGCCCTCATCTTCCTCGTCGGCATCATCAAGTACGGCGAGCGCACCTACTCGCTCTACTCCGGCAGCGTCTCCGGCTTCCGCGACAAGATCCTCGGCGAACCCAACCCTGGGCCAAACTACGCCAAGCTCATGACGGAGTTCGACTCCAAGAAGAAAGCCGGACTGCTGGTGGAGATCACCATCGCGGACGGCGAGGCCAGCAAGGCGAAGGAGGCGCTGGAGGAGGGCGAGGAGGTTCGGCTGGTGAAGGAGAGCAACAAGAGCCTGGAGGCGATGGCGTACGACTTCTTCACCATGTTCCGGCTGCTCTTCGTCAACCTCATCCTCAGCTACAAGGAGAGGAGGATCAGCCAGGCCTACTTCCTGGACCGCCACGACATGACGGCGGGCAAGGCGTTCGAGGTGGTGGAGGTGGAGCTCAACTTCATCTACGACATGGTGTACACCAAGGCGCCCGTGTCCCACAGCTCGGCAGGCTGCGTCCTCCGCTGCGTCGGCACCGCCTGCCTCGTCATCGCCATCCTCCTCTTCGCGCTCCTCGACAAGACCGCCATCCTCCCCGTGGACCGTGCCATCACCTACGCGCTGCTGCTCGGCGGGCTGGCGCTCGACGTGGCCGCCATCCTCATGCTCCTCTGCTCCAACCGGATGATCGTCTTCCTCGAAGCCAAGCACATGGCGTGGCTTTCCCGGGTGGCCAGGGCCGTGCGGCTGCAGCCAAGGCGGTGGTCGGAGCGGACCTCGCAGCTGAACTTCATCTGCTACTGCCTAGGCAAGCCCAAGGAGCAGGAGGGTCGCCGCCGCCAGTGCTGCAGGCGGGAGACGATCCCGCCGAGTGTGATGCGGTTCCTCATCTGGGTCGCCGACAAGGTGAGCGTCAGGGAGACCTTGGACGACTTCTTCTTCATCCAGCGCAAGCCGGTGAGCTGCAGTCACATCGACAACAACAACAACAAGATGAATCACTTGTGCTGCTGGCACAAGGAGGAGAAGCCGCACGTCGACGTGCTCACGTATGTCTTCGATAGGCTTAAGAAGGAGGCCCAAAAATTCAAGGGCTCCACGGACTACGACTTGATGAAGAAGCTGTGCGGCTACCGCGGCCAGGGGACCCTCAGGGATGACGAGGAGCTTGAGGAGGAGATGGACGAGTCCGAGTACTTGGTCGAGAAGATGGTGAAGGAGAAGCTGGATGGCGTCCTGCGGAACAGCATCGAGAGGGAGTTCGACGAGTCGCTGCTGCTATGGCACATCGCCACTGACCTATGCTGTCACCGAGAGCGGGAAGGGCCTCGGATGCACGACACCAACGGCTTGATGTCCATCAGCGAGACCCTGTCGGAGTACATGCTCTACCTCCTCGTCAGGCAACCGGAGATGCTGTCGGCCACCGCCGGCATCGGCCTACTCCGCTACCGGGACACGTGCGCCGAGGCGCGCCGCTTCTTCAAGTCGGCGGAGGCGTGGGACCCCAACCACGACGACGCCCGCCGGATGCTGCTTTCCGTCAACACGTCCAAGAAGCCGGCCGATGTGAAGGGCGACCGGAGCAAATCTGTGCTGTTCGACGCCTGCATCCTGGCCAAGGTGCTCCTCCAGCTCCACGACGACACCATGTGGAGGGTGGTGGCCGGAGTTTGGAGGGAGATGCTCACGTACGCGGCCGGCAAGTGCCATGGGAGCACGCACGTGCGGCAGCTCAGCCGCGGCGGCGAGCTCATCACCTTGGTCTGGTTTCTCATGGCGCACATGGGGATGGGAGACATGTACCGGATCAATGAGGGGGACGCCAAGGCCAAGCTCATCGTCCACGACCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MGFNPPVPQNDSDWEIRVAVLLSLTLQILLIFVGPMRKRSSHPVPRFAVWSCYLLADWVADLGLGLLLNNLGNISGGNGSSSSSSSSSISHLSAGVGGFKRGPGGGSTNNTSSGGGSPPIFAFWTPFLLLHLGGPDTITAYSLEDNELWLRHLIGLLFELFSAFVVFSCSVKSNPMVPATALIFLVGIIKYGERTYSLYSGSVSGFRDKILGEPNPGPNYAKLMTEFDSKKKAGLLVEITIADGEASKAKEALEEGEEVRLVKESNKSLEAMAYDFFTMFRLLFVNLILSYKERRISQAYFLDRHDMTAGKAFEVVEVELNFIYDMVYTKAPVSHSSAGCVLRCVGTACLVIAILLFALLDKTAILPVDRAITYALLLGGLALDVAAILMLLCSNRMIVFLEAKHMAWLSRVARAVRLQPRRWSERTSQLNFICYCLGKPKEQEGRRRQCCRRETIPPSVMRFLIWVADKVSVRETLDDFFFIQRKPVSCSHIDNNNNKMNHLCCWHKEEKPHVDVLTYVFDRLKKEAQKFKGSTDYDLMKKLCGYRGQGTLRDDEELEEEMDESEYLVEKMVKEKLDGVLRNSIEREFDESLLLWHIATDLCCHREREGPRMHDTNGLMSISETLSEYMLYLLVRQPEMLSATAGIGLLRYRDTCAEARRFFKSAEAWDPNHDDARRMLLSVNTSKKPADVKGDRSKSVLFDACILAKVLLQLHDDTMWRVVAGVWREMLTYAAGKCHGSTHVRQLSRGGELITLVWFLMAHMGMGDMYRINEGDAKAKLIVHDQ</aaseq>

Gene Sequence

<dnaseqindica>1..1674#1758..2444#ATGGGTTTCAATCCGCCGGTGCCGCAGAATGACAGCGACTGGGAGATCCGGGTGGCTGTGCTGCTCAGCCTCACCCTCCAGATTCTCCTCATCTTCGTGGGGCCCATGCGCAAGCGCTCCTCCCACCCTGTCCCGCGCTTCGCCGTCTGGTCGTGCTACCTCCTCGCCGACTGGGTCGCCGACCTCGGCCTCGGCCTCCTCCTCAACAACCTCGGCAACATCAGCGGCGGCAACGGATCCTCCTCCTCCTCTAGCAGCAGCAGCATCAGCCACCTCTCGGCCGGTGTCGGCGGCTTCAAGCGTGGGCCCGGCGGCGGCAGCACCAACAACACATCCTCCGGCGGCGGCAGCCCGCCCATCTTCGCCTTCTGGACTCCATTCCTGCTGCTCCACCTGGGCGGCCCGGACACCATCACCGCCTACTCCCTCGAGGACAACGAGCTCTGGCTCCGCCACTTGATTGGCTTGCTCTTCGAGCTCTTCTCCGCCTTTGTCGTCTTCTCCTGCTCCGTCAAGTCCAACCCCATGGTCCCGGCCACCGCCCTCATCTTCCTCGTCGGCATCATCAAGTACGGCGAGCGCACCTACTCGCTCTACTCCGGCAGCGTCTCCGGCTTCCGCGACAAGATCCTCGGCGAACCCAACCCTGGGCCAAACTACGCCAAGCTCATGACGGAGTTCGACTCCAAGAAGAAAGCCGGACTGCTGGTGGAGATCACCATCGCGGACGGCGAGGCCAGCAAGGCGAAGGAGGCGCTGGAGGAGGGCGAGGAGGTTCGGCTGGTGAAGGAGAGCAACAAGAGCCTGGAGGCGATGGCGTACGACTTCTTCACCATGTTCCGGCTGCTCTTCGTCAACCTCATCCTCAGCTACAAGGAGAGGAGGATCAGCCAGGCCTACTTCCTGGACCGCCACGACATGACGGCGGGCAAGGCGTTCGAGGTGGTGGAGGTGGAGCTCAACTTCATCTACGACATGGTGTACACCAAGGCGCCCGTGTCCCACAGCTCGGCAGGCTGCGTCCTCCGCTGCGTCGGCACCGCCTGCCTCGTCATCGCCATCCTCCTCTTCGCGCTCCTCGACAAGACCGCCATCCTCCCCGTGGACCGTGCCATCACCTACGCGCTGCTGCTCGGCGGGCTGGCGCTCGACGTGGCCGCCATCCTCATGCTCCTCTGCTCCAACCGGATGATCGTCTTCCTCGAAGCCAAGCACATGGCGTGGCTTTCCCGGGTGGCCAGGGCCGTGCGGCTGCAGCCAAGGCGGTGGTCGGAGCGGACCTCGCAGCTGAACTTCATCTGCTACTGCCTAGGCAAGCCCAAGGAGCAGGAGGGTCGCCGCCGCCAGTGCTGCAGGCGGGAGACGATCCCGCCGAGTGTGATGCGGTTCCTCATCTGGGTCGCCGACAAGGTGAGCGTCAGGGAGACCTTGGACGACTTCTTCTTCATCCAGCGCAAGCCGGTGAGCTGCAGTCACATCGACAACAACAACAACAAGATGAATCACTTGTGCTGCTGGCACAAGGAGGAGAAGCCGCACGTCGACGTGCTCACGTATGTCTTCGATAGGCTTAAGAAGGAGGCCCAAAAATTCAAGGGCTCCACGGACTACGACTTGATGAAGAAGCTGTGCGGCTACCGCGGCCAGGGGACCCTCAGGGATGACGAGGAGCTTGTCAGAGACATCCAGATGGAGCTGACCAAGCAACACGAGAGGCGGAGCTCAACAAGAAGGATAATAGCTCATCAACCAACAAGGAGGAGGAGATGGACGAGTCCGAGTACTTGGTCGAGAAGATGGTGAAGGAGAAGCTGGATGGCGTCCTGCGGAACAGCATCGAGAGGGAGTTCGACGAGTCGCTGCTGCTATGGCACATCGCCACTGACCTATGCTGTCACCGAGAGCGGGAAGGGCCTCGGATGCACGACACCAACGGCTTGATGTCCATCAGCGAGACCCTGTCGGAGTACATGCTCTACCTCCTCGTCAGGCAACCGGAGATGCTGTCGGCCACCGCCGGCATCGGCCTACTCCGCTACCGGGACACGTGCGCCGAGGCGCGCCGCTTCTTCAAGTCGGCGGAGGCGTGGGACCCCAACCACGACGACGCCCGCCGGATGCTGCTTTCCGTCAACACGTCCAAGAAGCCGGCCGATGTGAAGGGCGACCGGAGCAAATCTGTGCTGTTCGACGCCTGCATCCTGGCCAAGGTGCTCCTCCAGCTCCACGACGACACCATGTGGAGGGTGGTGGCCGGAGTTTGGAGGGAGATGCTCACGTACGCGGCCGGCAAGTGCCATGGGAGCACGCACGTGCGGCAGCTCAGCCGCGGCGGCGAGCTCATCACCTTGGTCTGGTTTCTCATGGCGCACATGGGGATGGGAGACATGTACCGGATCAATGAGGGGGACGCCAAGGCCAAGCTCATCGTCCACGACCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025009