BGIOSGA025021

From RiceWiki
Revision as of 16:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025021

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025021, complete gene.

LocusTag

OJ1567_G09.117

Ensembl Transcript ID

BGIOSGA025021-TA

Ensembl Protein ID

BGIOSGA025021-PA

Length

5439

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:571434..576872

Sequence Coding Region

571434..571584,572385..572452,572547..574643,574937..575087,576070..576872

Genome Context

<gbrowseImage1> name=IndicaChromosome07:571434..576872 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:571434..576872 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGCCAAGTACTTGCAGATGCTCGGGGAGGAGAGGCGGCCGGAGCTTCACCGGCAGCAGGCGGGGTGCGTCACCGGGATCCTGCAGGCGTTCGACCGCCGGTATCCCCTCGCCGCCCACCATTCCCACAATCGCCTTCTTCCCCCAGCCCATGCACTGTCAAGCAGTCCAAGTGTTGGGGAAGAGCGAACAAGATATTCATCTCAGATTGTTCTTGACAAGAACATGAGTAAAAGCTGGATCGATAATCAAAGAGCACCATTAACAGTGGAGTTGTCGCAAGGATCTTATTCATCGTCGTCTTGTTCTTCGTCGTCCTCCCTTGATGGAAACAGATCAGGACAGCAAGACCTATCCTCCACTGATCGAATGCTATTTCCGGAGAAGCCATTCAAAAGCTCACCGAAGCTCAAGAGCTCTTCTGACAGTGACTGTGGAGTGGATTACTACCTTGATGATGCCCTTGCCAAGCTCTCAGCCCAACCTAGCTACCCAACTCTTGGTATAAGAAATCTCGTAAAGGATTCAATATATAGAGATACTCGTGATTTTTCAATCAGAACTTTCACCAAAGAGGCAGAAAAAGATCACCTATTCAATTGTGGAGATCCGCCTAGAATCTTGAATGAGCCTCCTAACAGTGCTATCCAAGAGAAAAACAAAGGAACCATGGACATTGACGAATCCCTCCGAGTTTTAGCCAAGCTCAGGAATCCATCTGAATCAGTCCAGCAACCAAGGCTATCATATGATGCTCCTCGCTTCTCGTGTGAAGGAAGGGAATCAGCGTCAAAACTTAGGGAGGTGCCAAGATTGTCACTAGACATAAAGGAAAGCCCTCTTAGGAACCGCGAAATCGACGTAAGGCCAAAGCCAAGCATGACTGATGAAGACAGGAGAAGCAGCATCAGTAAAGATTACAGTCCACCCTTGGAGACCCAGCAAGAACACAATGCCTGTAAACGTCTCCCTAGCGTTGTTGCGAAACTCATGGGGTTGGAAGACTTGCCAGAGCATAAGGACAATACTGCGATATCTTCACAGGTATCCAAATCAGTTACAGAGAGGAGTGAAGAACCCACCATGCTGAGGCCTTTGAGCCTTTCTTCCCAAAATGAGGCTACTCCTAGGCAGCAGAGGAATCTAGATGCAACAATCAAGAATGTTCCTAACTCTAAGTTCCCTGTGGAAACTGCACCTTGGAAACAGCAGGAGAAGATTGTGCTACCTAGAAAATTGCCGAAGGGATCAAAGGGAGCTCATGGAAAAGAGCAACATGCTGCATCAGTTTACAGTGAGATAGAGAAACGGCTCAAGGACCTTGATTTTCAGCAATCGAACAAGGATCTCAGGGCACTCAAGCAGATCCTGGACTCGATGCAAGCGAAAGGGTTGTTGCAGAACAAGAAACGTGAGGAACCATCGATGCCGAAGATATATGATGGAGACCATGATAACGGAGATGTGACTGATGTAAACCTGAGACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACGGAAGAAGATAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCAAAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGTTTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAGAAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTACACCTCAACACCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAACAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGAGAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAAAAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAATCAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGAAGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACAAGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTTGCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTGAGATCTCAGCATGGCACTCAAACACCATCAGGAAGGAATCCTCAAAAAGTGAAAACCTCTTATGATGCAAACAAGGACCTGCCATCTATGGATCCTGCAGCAACTATTACTGAGCGGCCTAGTCCAGTCTCTGTATTGGACTCTTCGTTTGATCAGGAGGAATTTTTCCATACCAGCAAGACCACAAATTCATCTAATGTTGATGATGAGCATCACCCATCACCATCAGAAGAGTCCTGCAAGCCTTCTGAAAAGAAGTCCACAGAGCTCCCCACACAACCCAAGAACAGCAAGCTCGCAAACATAGCCAGCCTCCTTAAGAAGCTCCAGCAATTGAGCGTAAACAAGGATGAGGCACCTCCTGTCGATCACATTGCCTTCTTGTGCGAGACGCCAAGCCCAGACCATCGCTACGTATCCGAGATTCTACTGGCGTCAGGGCTTCTGATGAAAGACCTTGGTTCAGGGCTGTCACAAATGCAGCTCCACACATCAGGCTACCCCATCAACCCTGACCTGTTCTTTGTTCTTGAGCAACGAAAATCTGGGTGGACATCCAAACCTGAGGGGATCCATCAGAGCAGGAGCACCACAAAGCCAGATGATCCCAAGAGAGCGCACCGGAAGCTAATGTTCGAGGCGGTGAACGAGCTTCTCCTTGACAAGTTTGAGAAGGAAACCACACTCATCACTGGAGTAGCAGCAAGGGATCCAGTGATGAGCAGCGGGCAGCAGCTGGTGAAGATGATATGCTCCGGCATCGAATGCCTGAAGACGGAGAGATCGCGCATGTGCCAAGAAGACAGCAGCGTGATCCCTGACGCAGAGATCCTCAACAGGTTGGAAGGGTGGTCGCCGAGCTTCATCAGGAGGGAGCTTCCAGGCATGGTGCTGGAGATCGAGAGGTCGATATTCAAGGAGCTCGTCGACGAGGTGGTGCGCGGCGAGTCCGCCGACGGTCAGCCGGCGAAGGCCGGAAGGCGCAGAAGGAGGCTCTTCGCTTGA</cdnaseq>

Protein Sequence

<aaseq>MPAKYLQMLGEERRPELHRQQAGCVTGILQAFDRRYPLAAHHSHNRLLPPAHALSSSPSVGEERTRYSSQIVLDKNMSKSWIDNQRAPLTVELSQGSYSSSSCSSSSSLDGNRSGQQDLSSTDRMLFPEKPFKSSPKLKSSSDSDCGVDYYLDDALAKLSAQPSYPTLGIRNLVKDSIYRDTRDFSIRTFTKEAEKDHLFNCGDPPRILNEPPNSAIQEKNKGTMDIDESLRVLAKLRNPSESVQQPRLSYDAPRFSCEGRESASKLREVPRLSLDIKESPLRNREIDVRPKPSMTDEDRRSSISKDYSPPLETQQEHNACKRLPSVVAKLMGLEDLPEHKDNTAISSQVSKSVTERSEEPTMLRPLSLSSQNEATPRQQRNLDATIKNVPNSKFPVETAPWKQQEKIVLPRKLPKGSKGAHGKEQHAASVYSEIEKRLKDLDFQQSNKDLRALKQILDSMQAKGLLQNKKREEPSMPKIYDGDHDNGDVTDVNLRLNSTSNTKQAPEGTPSFTTEEDSTTERSFKSPIVIMKPAKSADLLSDVTEDSAVGPLGGLSELPQLRTANSADKRKSSKKVTREAVEQHTKSSSRAPTPQHLASFDKRANGRNEEISRKQKSTSQLMTENSARRQQMQRENNGSLLKHKNSTSPRVQQKKPDSERRARPPIPSPDSSKNQRQSVERSHLDSVSPRSKFRRKPAQAQGEDFHQNGVSRRTRSLNQEGNDMSARSDGSISVASELDVEVTSTDRSAEVNILRSQHGTQTPSGRNPQKVKTSYDANKDLPSMDPAATITERPSPVSVLDSSFDQEEFFHTSKTTNSSNVDDEHHPSPSEESCKPSEKKSTELPTQPKNSKLANIASLLKKLQQLSVNKDEAPPVDHIAFLCETPSPDHRYVSEILLASGLLMKDLGSGLSQMQLHTSGYPINPDLFFVLEQRKSGWTSKPEGIHQSRSTTKPDDPKRAHRKLMFEAVNELLLDKFEKETTLITGVAARDPVMSSGQQLVKMICSGIECLKTERSRMCQEDSSVIPDAEILNRLEGWSPSFIRRELPGMVLEIERSIFKELVDEVVRGESADGQPAKAGRRRRRLFA</aaseq>

Gene Sequence

<dnaseqindica>1..151#952..1019#1114..3210#3504..3654#4637..5439#ATGCCGGCCAAGTACTTGCAGATGCTCGGGGAGGAGAGGCGGCCGGAGCTTCACCGGCAGCAGGCGGGGTGCGTCACCGGGATCCTGCAGGCGTTCGACCGCCGGTATCCCCTCGCCGCCCACCATTCCCACAATCGCCTTCTTCCCCCAGGTGCTTGCTTTGCTTCCCCCACTTCTCCTAGTGCTATTGCTCGGTTCAAAGATGCAATTTTTTTTTTACCTTCCTTTTCTGTTCATTCTGCTACATCGAGATTTTTTTAATTGTTTGCATTTCTCTGTACAATCAGTAGACTATCAGTCTTGATTTGACTTGTGTGTGCATAAAAGACTTGGTCTTTGGTGTTTGATATGTGTAATTGAAGGCTTATAAACCCATAATTGGTGTGAAAGATGAGTGAAGTTGCTTGGTCTCAGAAGCTTCCAAAATCTTCATGTCAGGGTTGTATGGATGGGTGCTATGCATGCTCCTGGTGTTCCTTCATCCTGCATTGAATTGCTAGGTGTTGATGACAATTAGTGAGATCTAGCTTTTTCCCCAATTTTGGGCCAGGTGCCGGATTTTACAGGTGCATTTAGTTTTTGTGAGAGTGAGATGGAAGTTTTTCTCTGGAATCTTTAGCAGCTACTAAGATTTTTTTAAAAAAATCTGTACTAGTGCTAAATAGCTGGGAGTTGGTCGCAGCAGCCGACAAAAGAGAGAGAGAGAAAGAGAGCCATTACACCCTGTAGACAGATTATTAAGAGCCTGGTTTTGGATAATAAATCTATCTCACAAATGTTGACAGCACTAATTATTAAATTACAAGAAGGTTCTTTCCGAGAAATGTGGCTGTTTGGATGAACTACGACATTGACATATTTGTTTTTTCTTTGTTTCATTTAATTTGTAGCCATTTGAAGATGTTTTTTTAATCGGAAGATCCCTTCTAATATTTCAATTCTCTGAAACAGCCCATGCACTGTCAAGCAGTCCAAGTGTTGGGGAAGAGCGAACAAGATATTCATCTCAGATTGTTCTTGTAAGTTTCAATATTTCTTCTTACATTCAATAGGCATGGATGCATTGTTTATTGTCTTCTACAATCTGTTTGACTGGCTGCAATCTGCATTCAGGACAAGAACATGAGTAAAAGCTGGATCGATAATCAAAGAGCACCATTAACAGTGGAGTTGTCGCAAGGATCTTATTCATCGTCGTCTTGTTCTTCGTCGTCCTCCCTTGATGGAAACAGATCAGGACAGCAAGACCTATCCTCCACTGATCGAATGCTATTTCCGGAGAAGCCATTCAAAAGCTCACCGAAGCTCAAGAGCTCTTCTGACAGTGACTGTGGAGTGGATTACTACCTTGATGATGCCCTTGCCAAGCTCTCAGCCCAACCTAGCTACCCAACTCTTGGTATAAGAAATCTCGTAAAGGATTCAATATATAGAGATACTCGTGATTTTTCAATCAGAACTTTCACCAAAGAGGCAGAAAAAGATCACCTATTCAATTGTGGAGATCCGCCTAGAATCTTGAATGAGCCTCCTAACAGTGCTATCCAAGAGAAAAACAAAGGAACCATGGACATTGACGAATCCCTCCGAGTTTTAGCCAAGCTCAGGAATCCATCTGAATCAGTCCAGCAACCAAGGCTATCATATGATGCTCCTCGCTTCTCGTGTGAAGGAAGGGAATCAGCGTCAAAACTTAGGGAGGTGCCAAGATTGTCACTAGACATAAAGGAAAGCCCTCTTAGGAACCGCGAAATCGACGTAAGGCCAAAGCCAAGCATGACTGATGAAGACAGGAGAAGCAGCATCAGTAAAGATTACAGTCCACCCTTGGAGACCCAGCAAGAACACAATGCCTGTAAACGTCTCCCTAGCGTTGTTGCGAAACTCATGGGGTTGGAAGACTTGCCAGAGCATAAGGACAATACTGCGATATCTTCACAGGTATCCAAATCAGTTACAGAGAGGAGTGAAGAACCCACCATGCTGAGGCCTTTGAGCCTTTCTTCCCAAAATGAGGCTACTCCTAGGCAGCAGAGGAATCTAGATGCAACAATCAAGAATGTTCCTAACTCTAAGTTCCCTGTGGAAACTGCACCTTGGAAACAGCAGGAGAAGATTGTGCTACCTAGAAAATTGCCGAAGGGATCAAAGGGAGCTCATGGAAAAGAGCAACATGCTGCATCAGTTTACAGTGAGATAGAGAAACGGCTCAAGGACCTTGATTTTCAGCAATCGAACAAGGATCTCAGGGCACTCAAGCAGATCCTGGACTCGATGCAAGCGAAAGGGTTGTTGCAGAACAAGAAACGTGAGGAACCATCGATGCCGAAGATATATGATGGAGACCATGATAACGGAGATGTGACTGATGTAAACCTGAGACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACGGAAGAAGATAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCAAAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGTTTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAGAAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTACACCTCAACACCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAACAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGAGAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAAAAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAATCAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGAAGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACAAGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTTGCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTGAGATCTCAGCATGGCACTCAAACACCATCAGGAAGGAATCCTCAAAAAGTGGTAAACAATTTTCCTTCCTCCAGTTGGCTCTTTCATCCATATTCATAGATGATGTTATTAATGTAAAAACACAGTATTATTCTTCCTAATTTTCACCTTCCTATTATCTAAAAAAATATTCACCTTTGTAACAGCAAAAACATATATTTTAGGAAGAGCTACAATATTTGGTCATAGTTCTTCTGTAAAATGAAATCTGTCCAACTCTAGTTGGGTTCAAGCTGGAAATTTGAAATCGTACAAACATACCATAACTCTTGTCTAATTATGACCTTTTTTAAACTTAAATTCAGAAAACCTCTTATGATGCAAACAAGGACCTGCCATCTATGGATCCTGCAGCAACTATTACTGAGCGGCCTAGTCCAGTCTCTGTATTGGACTCTTCGTTTGATCAGGAGGAATTTTTCCATACCAGCAAGACCACAAATTCATCTAATGTTGGTAAGATCTGCTGCTTCATACTACTTGGTTCATCGATCATATAAAGTGGAGTATTAGTACTTTTCAAAAGAAAATGGGAACTCGAATAGGTTTTCCGGAGTGTCCTTTGAATTACTTCCTGCTTTGATGTCTTAGTTTTCCAGAGTTGGTTGGTTATGGAACTTCTTGTGTAAAGGTTTACATGACTCATGTCTGCTGATGTTTACATGACTCGATAATTAGGTTTCTTCATATTAATTTTCGACAAGTAGTAACGCTGGCAGTGGGTTGAGGTTCACGTGCACATAGTAAGCAAATAGAGATCTCCTGCTACCAATAGTGTTCCTCTCATATAGAATGGTGTGTGCATTATGCACCATAGTTATAGGGTTTTGAAATTTCCTCAAGGAGGGAAAGAACATAACTGAGAGTTGACAAAAATCCTACTGTGGTGTACTATGATTGCACCTACCACTACCAATCAAAAGATCTCCTGTATGCATAGTTCCTTTACAATTTATCCACATGGCTTGCTAGATAAAGTGATATGTCGTAATGCAAGTATGCAACCCCCAAGTAATGTGAACAGTAGAGTTTCAATGATAGAGTGCTTGTCGTTTTTTCTGCAGTAGCATTAGGCACATTCTTAATTTCATTAATGTTGCAATATCAGTATGGAGTGCTAAAGAATCTGCCTTCAGACCAGCGATTAGTTGCTGCACGACATGTTGTTTTGACAACAGAACAAGGAGAATTACAAGGGCCGCAGCATTTAATGTACTATATTTGACACGGATGCGGAATGAATATCAGTTCAAGAATGCTTTAGTTTTTGTCTTTATGCATCTTTAGATGCATCTGCTGGGATATTATCATTCCATTATCTGAAAAAGAGAAGTAGAAAACGCATGAACCTAACATGGTGGACTGGTTACTGAAATTGTTACCAGTGGTATTGATATTGTGTTCCAAAGACTGAAACCTAATTTCTTGAAATTTGCAGATGATGAGCATCACCCATCACCATCAGAAGAGTCCTGCAAGCCTTCTGAAAAGAAGTCCACAGAGCTCCCCACACAACCCAAGAACAGCAAGCTCGCAAACATAGCCAGCCTCCTTAAGAAGCTCCAGCAATTGAGCGTAAACAAGGATGAGGCACCTCCTGTCGATCACATTGCCTTCTTGTGCGAGACGCCAAGCCCAGACCATCGCTACGTATCCGAGATTCTACTGGCGTCAGGGCTTCTGATGAAAGACCTTGGTTCAGGGCTGTCACAAATGCAGCTCCACACATCAGGCTACCCCATCAACCCTGACCTGTTCTTTGTTCTTGAGCAACGAAAATCTGGGTGGACATCCAAACCTGAGGGGATCCATCAGAGCAGGAGCACCACAAAGCCAGATGATCCCAAGAGAGCGCACCGGAAGCTAATGTTCGAGGCGGTGAACGAGCTTCTCCTTGACAAGTTTGAGAAGGAAACCACACTCATCACTGGAGTAGCAGCAAGGGATCCAGTGATGAGCAGCGGGCAGCAGCTGGTGAAGATGATATGCTCCGGCATCGAATGCCTGAAGACGGAGAGATCGCGCATGTGCCAAGAAGACAGCAGCGTGATCCCTGACGCAGAGATCCTCAACAGGTTGGAAGGGTGGTCGCCGAGCTTCATCAGGAGGGAGCTTCCAGGCATGGTGCTGGAGATCGAGAGGTCGATATTCAAGGAGCTCGTCGACGAGGTGGTGCGCGGCGAGTCCGCCGACGGTCAGCCGGCGAAGGCCGGAAGGCGCAGAAGGAGGCTCTTCGCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025021