BGIOSGA025088

From RiceWiki
Revision as of 16:55, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025088

Description

Pathogenesis-related protein PR1a

Definition

Oryza sativa Indica Group BGIOSGA025088, complete gene.

LocusTag

B1249D05.41

Ensembl Transcript ID

BGIOSGA025088-TA

Ensembl Protein ID

BGIOSGA025088-PA

Length

450

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:1557540..1557989

Sequence Coding Region

1557540..1557989

Genome Context

<gbrowseImage1> name=IndicaChromosome07:1557540..1557989 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:1557540..1557989 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGACGGCGCAGAACTCGGCGCAGGACTTCGTGGACCCGCACAACGCGGCGAGGGCCGACGTCGGGGTGGGGCCGGTGAGCTGGGACGACACGGTGGCGGCGTACGCGGAGAGCTACGCGGCGCAGCGGCAGGGCGACTGCAAGCTGGAGCACTCGGACTCCGGCGGGAAGTACGGCGAGAACATCTTCTGGGGCTCCGCCGGCGGCGACTGGACGGCGGCGAGCGCCGTGTCGGCGTGGGTGTCGGAGAAGCAGTGGTACGACCACGGCAGCAACAGCTGCTCGGCGCCGGAGGGGAGCTCGTGCGGGCACTACACGCAGGTGGTGTGGCGCGACTCGACGGCGATCGGCTGCGCCCGCGTCGTCTGCGACGGCGACCTCGGCGTCTTCATCACCTGCAACTACTCGCCGCCGGGCAACTTCGTCGGCCAATCTCCCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MAATAQNSAQDFVDPHNAARADVGVGPVSWDDTVAAYAESYAAQRQGDCKLEHSDSGGKYGENIFWGSAGGDWTAASAVSAWVSEKQWYDHGSNSCSAPEGSSCGHYTQVVWRDSTAIGCARVVCDGDLGVFITCNYSPPGNFVGQSPY</aaseq>

Gene Sequence

<dnaseqindica>1..450#ATGGCGGCGACGGCGCAGAACTCGGCGCAGGACTTCGTGGACCCGCACAACGCGGCGAGGGCCGACGTCGGGGTGGGGCCGGTGAGCTGGGACGACACGGTGGCGGCGTACGCGGAGAGCTACGCGGCGCAGCGGCAGGGCGACTGCAAGCTGGAGCACTCGGACTCCGGCGGGAAGTACGGCGAGAACATCTTCTGGGGCTCCGCCGGCGGCGACTGGACGGCGGCGAGCGCCGTGTCGGCGTGGGTGTCGGAGAAGCAGTGGTACGACCACGGCAGCAACAGCTGCTCGGCGCCGGAGGGGAGCTCGTGCGGGCACTACACGCAGGTGGTGTGGCGCGACTCGACGGCGATCGGCTGCGCCCGCGTCGTCTGCGACGGCGACCTCGGCGTCTTCATCACCTGCAACTACTCGCCGCCGGGCAACTTCGTCGGCCAATCTCCCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025088