Os06g0148900

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0148900| Description = Protein of unknown function DUF295 family protein| Version = NM_001063349.1 GI:115466429 GeneID:4340134| Length = 15...")
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Gene Name

Os06g0148900

Description

Protein of unknown function DUF295 family protein

Version

NM_001063349.1 GI:115466429 GeneID:4340134

Length

1566 bp

Definition

Oryza sativa Japonica Group Os06g0148900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2536904..2538469

Sequence Coding Region

2537031..2537515,2537669..2538290

Expression

GEO Profiles:Os06g0148900

Genome Context

<gbrowseImage1> name=NC_008399:2536904..2538469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2536904..2538469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcacctgtccccacaactcggcgagactatgccctcgaagaaacggaaggtagagctccacgccgacgatcagcctccgccaacccaggcaataatggccacaccagagccctgcagtggacgcccatggccggacctcccgtcggagctcctgggcctcgtgctcctccgcctgccgtcccacgccgaccgcgtccgcctccgcgccgtctgccgcccatggcgctccagcgcgcgggtggagctggatcttcttccgccgcccctcccgtggctcctcctccgcggcggcgccttcatcaccctccccgacggcgcggcccaccgcttgcccgccgtccccggcgatgccacgcacctcgcttccacgggaagcggcctcctcatcgtgcacggcgacggcatgctctccctgatgaacccgtcctccttggcaacgacccctctcgccgccctcgccgccgtgctccctaaatacatcagctccatcgtcgacattgcatccttccaagggaagctctactacctaacatctgacgtaaggaaacgtcaggaggagctctatatctttggagtcgataatgctaagcagattggcataagatgcataagcagcaccctgaaagatataggcgaggaatcatggtttggcccttgctccaccgaaaggtacgcgacggagcgatatctcgtcgcgtccaacgatcggctgctcatggtgcgacggtggatcaatcttccaccaatctatccaagcgacagtggcattgttaagcgaacacggcggttcgaagtctttgaagccgcagacctgagcagtggctgtggaaggtggatcaaggtggatacattgatggggcatgctctctttgttagcaagggctgctccaagtcgctcagtgccggagctgaagaagactgcatctacttcatgcatgaggacatcaagaatgggaagcctgaagatccttttttggactctggcgtgtacaacatgagagacgggacagtggcgccattgttgacagagactctagtggcggagcctcttgcagtacacggcggtccatggtgtccaacttggcttttcccctctgaaacttga</cdnaseq>

Protein Sequence

<aaseq>MHLSPQLGETMPSKKRKVELHADDQPPPTQAIMATPEPCSGRPW PDLPSELLGLVLLRLPSHADRVRLRAVCRPWRSSARVELDLLPPPLPWLLLRGGAFIT LPDGAAHRLPAVPGDATHLASTGSGLLIVHGDGMLSLMNPSSLATTPLAALAAVLPKY ISSIVDIASFQGKLYYLTSDVRKRQEELYIFGVDNAKQIGIRCISSTLKDIGEESWFG PCSTERYATERYLVASNDRLLMVRRWINLPPIYPSDSGIVKRTRRFEVFEAADLSSGC GRWIKVDTLMGHALFVSKGCSKSLSAGAEEDCIYFMHEDIKNGKPEDPFLDSGVYNMR DGTVAPLLTETLVAEPLAVHGGPWCPTWLFPSET</aaseq>

Gene Sequence

<dnaseqindica>128..612#766..1387#aaaaaaaaataataaaaagaggcaggagcagctatacgatttcctcctacgcgagaaaccccaattccccaacctcgccggcgatcgccgattatcgcggcctcgccgccggcggctcccaccggcgatgcacctgtccccacaactcggcgagactatgccctcgaagaaacggaaggtagagctccacgccgacgatcagcctccgccaacccaggcaataatggccacaccagagccctgcagtggacgcccatggccggacctcccgtcggagctcctgggcctcgtgctcctccgcctgccgtcccacgccgaccgcgtccgcctccgcgccgtctgccgcccatggcgctccagcgcgcgggtggagctggatcttcttccgccgcccctcccgtggctcctcctccgcggcggcgccttcatcaccctccccgacggcgcggcccaccgcttgcccgccgtccccggcgatgccacgcacctcgcttccacgggaagcggcctcctcatcgtgcacggcgacggcatgctctccctgatgaacccgtcctccttggcaacgacccctctcgccgccctcgccgccgtgctccctaaatacatcaggtacaaatacctcgccgccgataggcaacgacttgtcccgctgatcaacaaggcggtggtgtctgataacttcaccgctttgctgatcggaaaccgcacttggaaggtcattgtcactattggattttcacctccacttgcacatttccctagctccatcgtcgacattgcatccttccaagggaagctctactacctaacatctgacgtaaggaaacgtcaggaggagctctatatctttggagtcgataatgctaagcagattggcataagatgcataagcagcaccctgaaagatataggcgaggaatcatggtttggcccttgctccaccgaaaggtacgcgacggagcgatatctcgtcgcgtccaacgatcggctgctcatggtgcgacggtggatcaatcttccaccaatctatccaagcgacagtggcattgttaagcgaacacggcggttcgaagtctttgaagccgcagacctgagcagtggctgtggaaggtggatcaaggtggatacattgatggggcatgctctctttgttagcaagggctgctccaagtcgctcagtgccggagctgaagaagactgcatctacttcatgcatgaggacatcaagaatgggaagcctgaagatccttttttggactctggcgtgtacaacatgagagacgggacagtggcgccattgttgacagagactctagtggcggagcctcttgcagtacacggcggtccatggtgtccaacttggcttttcccctctgaaacttgaacttagttggatagtattcttgcttccaggtgttatatttacgatttctcttcttggcatctcctgatagtagagttttggcatgaacataagagaagtgtcaattaacttttactgatggttcagatgtaaatgtaatcaggttgcttttggtaagatgaaggaaacacattcagatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0148900, RefSeq:Os06g0148900