Os06g0149100

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0149100| Description = Similar to Proline-rich protein APG-like| Version = NM_001063350.1 GI:115466431 GeneID:4340135| Length = 2300 bp| D...")
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Gene Name

Os06g0149100

Description

Similar to Proline-rich protein APG-like

Version

NM_001063350.1 GI:115466431 GeneID:4340135

Length

2300 bp

Definition

Oryza sativa Japonica Group Os06g0149100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2545953..2548252

Sequence Coding Region

2547060..2547214,2547347..2547591,2547692..2547888

Expression

GEO Profiles:Os06g0149100

Genome Context

<gbrowseImage1> name=NC_008399:2545953..2548252 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2545953..2548252 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaccgccatcctgtccgacgcgctgtatatcgtcagcacagggaccggcgatttcatccagaactactaccacaacgcctcgttgtcgagccgctacaacgtcaacagttactgcgatctcctcatcagcatcttctccggcttcgccaacgttgggggcgcggcggattggtgtcacgtctctgccgccgctgggctgtctgcctgccacaatcaggctgtatggcaagggccgcagcgggtgcgtggagaggctcaacggcgatgctgagaccttcaacaacaagctgaacatcactgtcgaagcgctggcgaagaagcattccgacctcaagatcgccatcttcgacatctacacaccgctccgaaacatgtccgagtcacctgcatcgcaaggcttcttggaggcgaggaagacttgctgccagacagggacaaggaagacgagggtctacctctgcaacccggcgacggcggggttgtgccgcaacgccagcgacttcgtgtacttcgacggtgtgcacccttcagaggcggccaatcttgtcatcgccgagtccacgatattggcagggataagcctagttacctaa</cdnaseq>

Protein Sequence

<aaseq>MPPPSCPTRCISSAQGPAISSRTTTTTPRCRAATTSTVTAISSS ASSPASPTLGARRIGVTSLPPLGCLPATIRLYGKGRSGCVERLNGDAETFNNKLNITV EALAKKHSDLKIAIFDIYTPLRNMSESPASQGFLEARKTCCQTGTRKTRVYLCNPATA GLCRNASDFVYFDGVHPSEAANLVIAESTILAGISLVT</aaseq>

Gene Sequence

<dnaseqindica>1108..1262#1395..1639#1740..1936#agctaagctaaagctacctagctaataggatacactgattaggagaacaatatggcacaactgaggcttacgctgctggctatgtctttgctgatactctcgccggcgatggacggcggcggtggcggcaccgtccaggcgcagatcgtgccggcggcgatctcgttcggtgactcgaccgtcgacgttggcaacaacaactacctgcctggtgccgtcttcaaggccaactacgtgccttatggggtgaacttcggcagccgccgtaagccgacagggaggttctccgacggcaagatcgtcaccgacatcaccggttgttaacttcacacacgagtacacatagaccatagttacctgcatgctatttttgcaaagttgcaattatatattttggttaaaaaatgatatgatgcagctgaaacgcttggctttgagagctatgcaccaccgtaccttagcccgcaggcgaagggggataaccttctccttggcgccaactttgcctccgcggcgtccagctaccatgacgacacggccgccatgtatgtgagtacataaataacttgtcccagcaagctacacataaatagatactttttttttagtgaaacataaagctacatatatagatagagagctacaagtgtttacttaattagtttaacttattagctacttcctccgtactcataaagctcgtaaaggaagtcgttcaggataatgtttaagtcaaacattgggaatatataaattatgaataactctcaagttgttgagtttgaaaatataaaaattatatgaatatatttgtcttgaaaaatactttcataaaagtatacatatatcactttttaataaatatttttatagaaacaataagtcaaagttgtgttttgcagaccgtgtcgctcgtgtcgttgtccaaaacgacttcctttacgaatatggagggagtacaagctaaggttcctatttttggtgaggtgacaaatgacaaatggtcaaatgcatacctttctttgtaggatgcaattactttgacgcagcagctcaagtactacaaggagtaccagtccaagcttgcggcgttgatcggccagaagaatgccaccgccatcctgtccgacgcgctgtatatcgtcagcacagggaccggcgatttcatccagaactactaccacaacgcctcgttgtcgagccgctacaacgtcaacagttactgcgatctcctcatcagcatcttctccggcttcgccaacgtcagtacgctgccaccgccttcatcgtctcagcttctctacaactgcatgcgttgcaccggcattctggcagcgagctgtgtgcatggacttgtgacgatagcttgtgctgtgggtgcaggagttgtataggttgggggcgcggcggattggtgtcacgtctctgccgccgctgggctgtctgcctgccacaatcaggctgtatggcaagggccgcagcgggtgcgtggagaggctcaacggcgatgctgagaccttcaacaacaagctgaacatcactgtcgaagcgctggcgaagaagcattccgacctcaagatcgccatcttcgacatctacacaccgctccgaaacatgtccgagtcacctgcatcgcaaggtaatagaaacaaggtcaagtgatcggatggtcgtaagattgataattgatgagagttcatcatgagtgttgatcacacattcaattaaaaaatgattaggcttcttggaggcgaggaagacttgctgccagacagggacaaggaagacgagggtctacctctgcaacccggcgacggcggggttgtgccgcaacgccagcgacttcgtgtacttcgacggtgtgcacccttcagaggcggccaatcttgtcatcgccgagtccacgatattggcagggataagcctagttacctaactcactcggtctgactctgaactaccatggcaggtgcatgaaggcgctacagttcatcatcaattagtttcgaaggttgtgttgtgttttcaacctaagaaaaagtgttctccagtgatccattcgcatatacaaacaatatagtttgtttctataaatatgtgcgtcagtctcctactgacctgcataactgcaagttaaatccaacttaaaacatgtcatccaactaagtatgaatgacgaacagtgttactctactcttttttttcttcttcatttttattaagattttttcctacccagactagcagctctcagaacatgctgtaatgatcttaacagaaaagaagtcaaatcgtttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0149100, RefSeq:Os06g0149100