Os09g0490400

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0490400| Description = Glycoside hydrolase, family 1 protein| Version = NM_001070073.2 GI:297609696 GeneID:4347440| Length = 2436 bp| Defi...")
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Gene Name

Os09g0490400

Description

Glycoside hydrolase, family 1 protein

Version

NM_001070073.2 GI:297609696 GeneID:4347440

Length

2436 bp

Definition

Oryza sativa Japonica Group Os09g0490400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19543433..19545868

Sequence Coding Region

19543667..19543953,19544671..19544794

Expression

GEO Profiles:Os09g0490400

Genome Context

<gbrowseImage1> name=NC_008402:19543433..19545868 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19543433..19545868 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttcttccaacattttggcaggagttcaccccgatcttcttcaactaccctccgggtctccgcgagctactcctctacaccaagaggaggtacaacaacccgatcatctacgtcacagaaaatggaatcgccgaggggaacaacaagagcttgccaatcacggaggcgctcaaggacgggcataggatcgagttccactcgaaacacctgcagttcgtcaaccacgccatcaagaacggggtgaacgtgaagggctacttcacctggacgttcatggactgcttcgagtggggcgacggatacctcgaccgattcggcctcatctacatcgaccgcctcaacaatctcaagcgctaccacaagcagtccagctactggatcgccaacttcctcaagcggaagaagtactga</cdnaseq>

Protein Sequence

<aaseq>FLPTFWQEFTPIFFNYPPGLRELLLYTKRRYNNPIIYVTENGIA EGNNKSLPITEALKDGHRIEFHSKHLQFVNHAIKNGVNVKGYFTWTFMDCFEWGDGYL DRFGLIYIDRLNNLKRYHKQSSYWIANFLKRKKY</aaseq>

Gene Sequence

<dnaseqindica>1916..2202#1075..1198#atatcatgtaagttttttagatagagacaaagaaaatccataaacctgttaaaatcactcaacttgttaagctgatgatgaggttgattaaagttaggccattcacctaagtttcaaaagaaaaaccagttagatagaacagggtaggtaatttggtcatctgaatcaaaataaattgcttgtcggttctgcaaatttggctagaattcatcaatgactcacattaaaatttgtcgattatgcaaatttggctgtgtgcctgtcgaaagacaccggagatgtaaaccattaccattatcttaaaaaaatactcatattagagatttggattgtcaatattttcagcaaggattatgtggacttcgccgaagtgtgcttccgggagttcggcgaccgtgtcaagttctgggccaccttcaacgagccatggacctactgctcccagggctacggcaccggcatccacgccttgggccggtgctccccctacgtctccacctcctgtgccggcggcgactccagccgcgagccttacctagcagcgcaccacgtcatcctcgcccatgccaccgccgtccacctctaccgcaccaagtaccaacccacgcagcacgggcagatcggcatcacggcggtgtcgcactggttcgtgccgtataatgacacggccgctgaccgccgcgttgtgcaacgcagcctcgacttcatgtacggatggttcctggaccccatcgtgcacggcgactacccaggcacgatgagggggtggctcggggcgcggctgccggcgttcacggcggagcaggcggcagcggtgaggggatcctatgacttcatcggcgtcaactactacaccacctactacgccaagagcgtgccgctgcccagctcaaacaggctctcctacgacaccgacatccgcgccaacaccactggcttccgcaacggcaaacccattggtccgcaggtacgtacatagatcgactcctcctcaacaccaacgcatgaacacaacatcatgttcttgattttcttgagaccgatcgatcaatccatcaatccacggctgattaatttcttccaacattttggcaggagttcaccccgatcttcttcaactaccctccgggtctccgcgagctactcctctacaccaagaggaggtacaacaacccgatcatctacgtcacagaaaatggtaattaaataaccatctttgttttcattacacacgagataaatacgtgcactacactcacccacgagtacgcacacttctagcatacgctcaaatagacagggactaatagcttatcctaagctccactaaattcctattgaaaatgtactcatgtatgcataatattcatgagcattaggatttataccgccgcacttcccaattaaataactttctcattgtaatggctttaacttctttttgatatactagctgaatgcttgtgcattgcaacaggaattaatatacggctttaaaaccacaaatattaaaataaaattatccccattataaatcattccacattatgtttttcataattttgtatctcactttaaaataagttttccttgtttgatggcttctggccaaggaagggataaaagtccacctatctcagtatttaggggacccatatggtagtggtggtgggtggtggcagattcaccactcaccattatcattagggtcttttaaaggagtatagataagtagtacactctttatatagattaatttgaacttgaagttgcatgttttgtgggctgatacatttgaactacattctcattttttttctccaaaactttttcacaactatttggataacatggaaatgaaaaaaaaaacgaggggatcgacatcctgcaagatgactttcatgtgtgattgcaggaatcgccgaggggaacaacaagagcttgccaatcacggaggcgctcaaggacgggcataggatcgagttccactcgaaacacctgcagttcgtcaaccacgccatcaagaacggggtgaacgtgaagggctacttcacctggacgttcatggactgcttcgagtggggcgacggatacctcgaccgattcggcctcatctacatcgaccgcctcaacaatctcaagcgctaccacaagcagtccagctactggatcgccaacttcctcaagcggaagaagtactgagtgagctaatggttctagctaagctaagctagctctctgtgcgattttcagtttcagagtgattggtgaattgatgtactgtacatgcttgaccaccgttgccattgttgagtgagggggaggggataaagctcattgttgcttgagctatttgatttaccaattggaattcgtttcggttgtttgttcgtcgatctggaggaaaataaaacaaattctcgtctctttgtttca</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0490400, RefSeq:Os09g0490400