Os09g0491100

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0491100| Description = Similar to Beta-primeverosidase (EC 3.2.1.149)| Version = NM_001070074.1 GI:115479890 GeneID:4347441| Length = 3071 ...")
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Gene Name

Os09g0491100

Description

Similar to Beta-primeverosidase (EC 3.2.1.149)

Version

NM_001070074.1 GI:115479890 GeneID:4347441

Length

3071 bp

Definition

Oryza sativa Japonica Group Os09g0491100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19559063..19562133

Sequence Coding Region

19559332..19559603,19559774..19559876,19559968..19560589,19561065..19561152,19561226..19561303
,19561430..19561505,19561601..19561659,19561750..19561816,19561957..19562094

Expression

GEO Profiles:Os09g0491100

Genome Context

<gbrowseImage1> name=NC_008402:19559063..19562133 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19559063..19562133 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatcagaatgggaaggcgactcctcttcaccttgttcttgggagctctgttctgcaatggcgtttacgccaagtttacccggtacagcttccccaaggacttcatcttcggcacaggttcagcagcttatcagtatgagggcgcctacaaagaagggggcaaaggtcctagcgtctgggacaacttcactcacattccaggtaaaattttaaacaatgataacggcgatgtggcaaatgacttctatcaccgatacaaggaggatgtgagcctcctgaaggacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaaatggatccttgagtggaggaataaacaaagaaggggttgctttctacaacagcttgatcaatgatgtcatagcaaaagggatgatcccatttgtcactatcttccactgggacacccccttggctctggaaagcaaatacggaggattcctcagtgaagacatagtgaaagaatacgtggacttcgcggaggtgtgctttcgcgagttcggcgaccgtgtcaagtactggaccacatttaatgagccattcacatatagcgcctacggctacggcaagggcgtgtttgcgccgggacgatgctcttcatatgtttccaagtcatgcggcgtcggtgactccagtcgcgagccctacctcgtggcacaccacatccacctctcccacgctgccgctgtccagctttaccgcaccaagtaccagccaacacagaagggacagatcggcatggtggtggtcacccactggttcgtgccgtacgacaactccgacgctgaccgtggcgctgtgcaacggagcctagacttcatctatgggtggttcatggaccctatcgtgcatggtgactacccaggcaccatgagaggttggctcggcaatcggctgccagagttcacgcctgaacagtcggcgatggtgaagggctcctacgacttcatcggagttaattactacaccacctactacgctaagagtataccgccgcctaactccaacgagctatcctacgacctcgacaaccgcgccaacaccaccggcttccgtaatggcaaacccatcggtccacaggaatttacaccgatcttcttcaactaccctccaggtctccgtgagctcctcctctacaccaagaggagatacaacaacccgaccatctatgttacagaaaacggcatcgatgagggtaacaacagcacactgccagaggcgctcaaggatggacacaggatcgagttccactcaaagcacctgcagttcgtcaaccacgccatcaagaatggggtgaacgtgaagggctacttcacgtggacattcatggactgctttgagtggggtgacggctaccttgacaggttcggcctcatctacgtcgaccgcaagacgctcaagcgctaccgcaaggagtccagctactggatcgaagacttcctcaagaggcactga</cdnaseq>

Protein Sequence

<aaseq>MGIRMGRRLLFTLFLGALFCNGVYAKFTRYSFPKDFIFGTGSAA YQYEGAYKEGGKGPSVWDNFTHIPGKILNNDNGDVANDFYHRYKEDVSLLKDMNMDAF RFSIAWTRILPNGSLSGGINKEGVAFYNSLINDVIAKGMIPFVTIFHWDTPLALESKY GGFLSEDIVKEYVDFAEVCFREFGDRVKYWTTFNEPFTYSAYGYGKGVFAPGRCSSYV SKSCGVGDSSREPYLVAHHIHLSHAAAVQLYRTKYQPTQKGQIGMVVVTHWFVPYDNS DADRGAVQRSLDFIYGWFMDPIVHGDYPGTMRGWLGNRLPEFTPEQSAMVKGSYDFIG VNYYTTYYAKSIPPPNSNELSYDLDNRANTTGFRNGKPIGPQEFTPIFFNYPPGLREL LLYTKRRYNNPTIYVTENGIDEGNNSTLPEALKDGHRIEFHSKHLQFVNHAIKNGVNV KGYFTWTFMDCFEWGDGYLDRFGLIYVDRKTLKRYRKESSYWIEDFLKRH</aaseq>

Gene Sequence

<dnaseqindica>2531..2802#2258..2360#1545..2166#982..1069#831..908#629..704#475..533#318..384#40..177#aattcagctagctcattctgaaccccatctctcgctggaatggggatcagaatgggaaggcgactcctcttcaccttgttcttgggagctctgttctgcaatggcgtttacgccaagtttacccggtacagcttccccaaggacttcatcttcggcacaggttcagcagcttatcaggtacatatgacatgttggaattctgaagctcaatatcagttgtgtcactgctcaactagccatgtttatgttatatagtgatgtaatttgtagctggatactcatcagtttatcctgggattggttttgattacttgcagtatgagggcgcctacaaagaagggggcaaaggtcctagcgtctgggacaacttcactcacattccaggttaattcgtgaggaagtgcatcacaaagcttgtaattaattcttccggtttatctgacagacagaaattaacaatccatatgactgcaggtaaaattttaaacaatgataacggcgatgtggcaaatgacttctatcaccgatacaaggtgaccttccattttgactgactgacgatgattaacatcgagtgtctgaattctctgaaacgggtcatgttttgacaaatccgatcaaatttcaggaggatgtgagcctcctgaaggacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaagtgagtctcaaaattttctcccctttttttttttgttttgcgaaacacaatataaacgcagacatgtgagttccaaagcttgatgttaatcacatagccactgcgtgcaaattgtaattactgcagatggatccttgagtggaggaataaacaaagaaggggttgctttctacaacagcttgatcaatgatgtcatagcaaaaggtgatcactaacttttattccaaaaacgcaaaaaaatatgaactaattttgacaacatttctgtatcacatagggatgatcccatttgtcactatcttccactgggacacccccttggctctggaaagcaaatacggaggattcctcagtgaagacatagtgtaagttctttcttgcttactgtactttcacaaacattcttgcaatctctcgagaaaaaacctttaattcccgagtgattttacaatactatttagagaaattttatggtccttaagaaaataccttgagataccaaattttacgctagaaaatatagcacctcacgatacattctcaaggatgatagtatctactgatagtattttactattcttactatcagtattatcaccaccaatacaagtgatctcaaccgttgattttcatttagttctaatactaatagaaaatattattattatatatcaatagttgagatgatattataaataggtaatattattattataccatcattagagataatattataaatagatatgacccattatattagaaaaatataaactatctttcaattgattttaatattagaaaataccactttaaaacacccttgctcaacatgtgcaggaaagaatacgtggacttcgcggaggtgtgctttcgcgagttcggcgaccgtgtcaagtactggaccacatttaatgagccattcacatatagcgcctacggctacggcaagggcgtgtttgcgccgggacgatgctcttcatatgtttccaagtcatgcggcgtcggtgactccagtcgcgagccctacctcgtggcacaccacatccacctctcccacgctgccgctgtccagctttaccgcaccaagtaccagccaacacagaagggacagatcggcatggtggtggtcacccactggttcgtgccgtacgacaactccgacgctgaccgtggcgctgtgcaacggagcctagacttcatctatgggtggttcatggaccctatcgtgcatggtgactacccaggcaccatgagaggttggctcggcaatcggctgccagagttcacgcctgaacagtcggcgatggtgaagggctcctacgacttcatcggagttaattactacaccacctactacgctaagagtataccgccgcctaactccaacgagctatcctacgacctcgacaaccgcgccaacaccaccggcttccgtaatggcaaacccatcggtccacaggtgcgtacgtgactacgtgtacacatatacccacatcgatccatccattttactgaggaattcaacgtacgcgaatccttgtcatgtctaggaatttacaccgatcttcttcaactaccctccaggtctccgtgagctcctcctctacaccaagaggagatacaacaacccgaccatctatgttacagaaaacggtaagaacatataatctttcaacactggtcctacaaaattcatccaaaattaaacttaaatataggttgatcgaaaagaaccatatcctcaattaactcaattaacatgtatatatactaaatcgttcgcgaacatcgaaaggcgtaaaatttgtgtgcaatgtgtacaggcatcgatgagggtaacaacagcacactgccagaggcgctcaaggatggacacaggatcgagttccactcaaagcacctgcagttcgtcaaccacgccatcaagaatggggtgaacgtgaagggctacttcacgtggacattcatggactgctttgagtggggtgacggctaccttgacaggttcggcctcatctacgtcgaccgcaagacgctcaagcgctaccgcaaggagtccagctactggatcgaagacttcctcaagaggcactgatccagccccacaaaatttcggattgatcacgagatcgatcggctggccaccagatttgtgtttcgtcagtctagctttcagctggttaatttgtgatttgtgcatcagtggtgatgaccgatatgatggcgtgatgaattatgctgcattactattgaatgtgtacctcagtacctgtgcatcattgctggctgatcccattgagccggacaataataagaagaaacaataatgctccctgtcgagcagtgttgggctggttcaggctt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0491100, RefSeq:Os09g0491100