BGIOSGA025409

From RiceWiki
Revision as of 16:57, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025409

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025409, complete gene.

LocusTag

OsI_25408

Ensembl Transcript ID

BGIOSGA025409-TA

Ensembl Protein ID

BGIOSGA025409-PA

Length

2989

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7038984..7041972

Sequence Coding Region

7038984..7040404,7041879..7041972

Genome Context

<gbrowseImage1> name=IndicaChromosome07:7038984..7041972 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:7038984..7041972 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTACTCTCCAGCCGCCTCCACCTCGCCACGCCCTCCTCGCCGGCAACCTGCCCCTCTCCGCTCCGCCGCCGCCGCCGCCTCGGCCTCCCGGAGCCACGAACGCGTCGCCCTCCGCCACTAGCTTCCAAGAACCCCGCGCCGCCGCAGCCGCAGCCGTTGCCGCTGTCCTGGCTGTCGCCGAGGCGGCAATGGCGGTGGCGGAGCGGCTACGGCGACGCCGACGCCGCCGAAGAAGAATCACCGGCGCCGCTCGTCGAGGACGGGGTATCCGGTGGAGGGGAGAAGAAGAGCTTCTGGGCGGCGGTGAGCCTCATCGTCGGAACGGCGGTGGGGCCGGGGATGCTGGGGCTGCCGTCCGCCACCATCCGCTCCGGGCCGGTCCCGTCCACGGCGGCGATCGTGCTCTCGTGGGTCTACGTGGTGTCCTCCATCGTCCTCGTCGCGGAGCTCAGCTTCGCCGCGATGGAGGACGGCGGCGTCGACGAGGTCAGCTTCACGGGACTTGCGTCGAGCACCTTGGGGGCGACGCTCGGGGCGGTCGTGGCCGTCGTCTACGCCGCCCTCAGCTTCTCCCTGCTCGTCGCCTGCGTCGCCGGCATCGGCTCGCTGGTGTCCCAGCTCTTCCCGGCGGTGGATCCGGCCTTGGCCAACGCCATCTTCCCGTGCTTCGCCGGGACGCTCATCGCGTTCTTCCCCTTCAAGGCCGTCGACGGCGCCAACCGCGCGCTCTGCGGCCTGATGCTCGCCTCCATCACCGCGCTTGTTGTCACCGGCGTTTCCGTCGGCCGGAGCAGCATGCTGAGATCGCTCGGCTACGCCTGCTGGCGCCCTGCTACCATCCTGCCTGCAATTCCGGTGACCGTCCTGACGCTTGGGTTCCATGTCATCACGCCGTTCATCTGCAAGATTGTGGGGGATTCAGTGTACGATGCGCGGCGCGCAATACTGATCGGCGGTGCCGTCCCATTGGCCATGGTGTTGTCCTGGAATGCCGTCATTCTCGGGTTGGCAAGTTCCAGTGGCAGTGCGAGATTCGATGATCCAATAAAGCTGCTGCTCTCGGTGAATCCAGCAGCATTGCCTGCCGTTCGAGGCTTTGCGTTTGCCGCATTGGCGACGAGCTTGATAGGATACGCGGTGAGCTTTCCGAAGCAGCTGGCTGATACAGTGGAGTTGATTGGGCAGAGGTTTTCTCCGAAGCGAGGAATTGGGCAGCTCTCTGAATCTAGCGGTGGCCATGGAAGAAATGGGGCTATTCTCACATGGATTGTGCTGATTATTCCTATCGTTATTGCGTCGTTCTTCTCAGCGGCCTTCTCCAAGGCACTGGATTTTGCTGGGGTTTATGCAAACTGCTTCCTTTTTGGGATCCTCCCTCCTGTCATGGCCTGGATTCACCGGTCACAGAAGAGAAAGAGATCGTCTGGTTCATGTGAAGATATTTTGCCTGGTGGGAATGTTGCTTTGTTGATACTTTTCAGTATTGCTGTGGTCCTAGCATTCTGGCACTAG</cdnaseq>

Protein Sequence

<aaseq>MLLSSRLHLATPSSPATCPSPLRRRRRLGLPEPRTRRPPPLASKNPAPPQPQPLPLSWLSPRRQWRWRSGYGDADAAEEESPAPLVEDGVSGGGEKKSFWAAVSLIVGTAVGPGMLGLPSATIRSGPVPSTAAIVLSWVYVVSSIVLVAELSFAAMEDGGVDEVSFTGLASSTLGATLGAVVAVVYAALSFSLLVACVAGIGSLVSQLFPAVDPALANAIFPCFAGTLIAFFPFKAVDGANRALCGLMLASITALVVTGVSVGRSSMLRSLGYACWRPATILPAIPVTVLTLGFHVITPFICKIVGDSVYDARRAILIGGAVPLAMVLSWNAVILGLASSSGSARFDDPIKLLLSVNPAALPAVRGFAFAALATSLIGYAVSFPKQLADTVELIGQRFSPKRGIGQLSESSGGHGRNGAILTWIVLIIPIVIASFFSAAFSKALDFAGVYANCFLFGILPPVMAWIHRSQKRKRSSGSCEDILPGGNVALLILFSIAVVLAFWH</aaseq>

Gene Sequence

<dnaseqindica>1..1421#2896..2989#ATGTTACTCTCCAGCCGCCTCCACCTCGCCACGCCCTCCTCGCCGGCAACCTGCCCCTCTCCGCTCCGCCGCCGCCGCCGCCTCGGCCTCCCGGAGCCACGAACGCGTCGCCCTCCGCCACTAGCTTCCAAGAACCCCGCGCCGCCGCAGCCGCAGCCGTTGCCGCTGTCCTGGCTGTCGCCGAGGCGGCAATGGCGGTGGCGGAGCGGCTACGGCGACGCCGACGCCGCCGAAGAAGAATCACCGGCGCCGCTCGTCGAGGACGGGGTATCCGGTGGAGGGGAGAAGAAGAGCTTCTGGGCGGCGGTGAGCCTCATCGTCGGAACGGCGGTGGGGCCGGGGATGCTGGGGCTGCCGTCCGCCACCATCCGCTCCGGGCCGGTCCCGTCCACGGCGGCGATCGTGCTCTCGTGGGTCTACGTGGTGTCCTCCATCGTCCTCGTCGCGGAGCTCAGCTTCGCCGCGATGGAGGACGGCGGCGTCGACGAGGTCAGCTTCACGGGACTTGCGTCGAGCACCTTGGGGGCGACGCTCGGGGCGGTCGTGGCCGTCGTCTACGCCGCCCTCAGCTTCTCCCTGCTCGTCGCCTGCGTCGCCGGCATCGGCTCGCTGGTGTCCCAGCTCTTCCCGGCGGTGGATCCGGCCTTGGCCAACGCCATCTTCCCGTGCTTCGCCGGGACGCTCATCGCGTTCTTCCCCTTCAAGGCCGTCGACGGCGCCAACCGCGCGCTCTGCGGCCTGATGCTCGCCTCCATCACCGCGCTTGTTGTCACCGGCGTTTCCGTCGGCCGGAGCAGCATGCTGAGATCGCTCGGCTACGCCTGCTGGCGCCCTGCTACCATCCTGCCTGCAATTCCGGTGACCGTCCTGACGCTTGGGTTCCATGTCATCACGCCGTTCATCTGCAAGATTGTGGGGGATTCAGTGTACGATGCGCGGCGCGCAATACTGATCGGCGGTGCCGTCCCATTGGCCATGGTGTTGTCCTGGAATGCCGTCATTCTCGGGTTGGCAAGTTCCAGTGGCAGTGCGAGATTCGATGATCCAATAAAGCTGCTGCTCTCGGTGAATCCAGCAGCATTGCCTGCCGTTCGAGGCTTTGCGTTTGCCGCATTGGCGACGAGCTTGATAGGATACGCGGTGAGCTTTCCGAAGCAGCTGGCTGATACAGTGGAGTTGATTGGGCAGAGGTTTTCTCCGAAGCGAGGAATTGGGCAGCTCTCTGAATCTAGCGGTGGCCATGGAAGAAATGGGGCTATTCTCACATGGATTGTGCTGATTATTCCTATCGTTATTGCGTCGTTCTTCTCAGCGGCCTTCTCCAAGGCACTGGATTTTGCTGGGGTTTATGCAAACTGCTTCCTTTTTGGGATCCTCCCTCCTGTCATGGCCTGGATTCACCGGTCACAGAAGAGAAAGAGGTAACATCAATTATGCTTTATGCCATGTCTCTTCTAGTAGAAGATAAACTTTTCAGTTTTCAATATGCCTTATAGTATGAAATTCAGAAAACAATTAAAGGAGGAATAGAGAGATGCTCAAACAGTGTGTAATGATCTGTGGAACGATTATATATAAATCGTCCAGGTAGCAGCCTCTCTTTATCTTAGATAATGATTAGCAGAACTGCAACATGGGAACTATGCAGAACTGGTGCATGGTAAATAAACAAAAGTTTATGAAAGAGGTAACTTCATTAGACCATGTCTCTTCTAGAAGATACTTTTTGCAGTTAGTCAATAACTCGATATATCTGATATAAATTTAGATAACCATCAAGGAGGATAGAGAGAGCTCAGATCAAATAATGTATGATGATCAGTAGCATTATTATTTATGAAAATTTGGTATAAATTCTCCTTATCTTGTACAATGTCTAAAAGAACTGGACCGTGTAACTATGTGGAACTGGTGCATGGTAACTACAAAAAGTTCATGATGAACCATAAGAAAAGGTTTGGTGGGAAATTACAAAAATAGTCAGAAAGGCAACAATTATGAATCGGAAGCAAATAAGGAGGATATAGAAATGCTCAAATAATGTGTAATGATTCTTAGAATGACTATACAAAATCTTTGATAATGTCTAGCAAAACTGCAGCATGGTGCATGGTAACTAAGAAAACTTATGACAAAATACAAAACTGAAATTTCATATTGTACTGGGTCAAGTAGGAAATTAAAAAAGAGGTTGTAAAAGTAACAATTAGGGATTGAAAGCAAGATTGACATGTACTGAATACGAAAACCATTGGAAGGCACTAAATCATGCATTTTATTCAAGGATCAGAGCTTTTGGGCCTGTCCACAACCTCCAGCTCAAAATATCATTCTTAACATCACTATTGATGTACTTTCTTTGTGAATCATGTGTCTCATTCTTTTCACATCTGTAACAAACCATTATTACTACTCAAGTTAGCCTCAAGATAGGACATTTCACCTCCTTTTGTCAATACAATCACATGGTTTTCGAGACATTAGTTGTACCTTTTTTCTAGATTTAAACCTGTCACTCTTCAAGAACTATGATAGTCACGGGTGTGAATTAGTAACAACCAAGCCAGCTTTATAATTCTAAAATTAAGTAGCTATCCATCCCTTTCATTCTCTTGGCAAACCAGAGATATCTTTGACTTTGTTTCACATCTTATCTTATGTGTGTGTGAGTAACATGATGCAATATATGTGACATAGGATCATTGGTTCCAGATGCAAGACATGTTTTTTTAAAATGATTAAATGATGTTATGTTTTGTAATATAAAATATTATAAAACTACAGTAACACAAAAAAAACTTGAGTTTCTAAACTGTTGGTGTTCTATGATTTAGTGTTCGACATATTATCATTTTAGTGTGTAATGACCAGTTTTGTGTATGCTTCTTCATACAGATCGTCTGGTTCATGTGAAGATATTTTGCCTGGTGGGAATGTTGCTTTGTTGATACTTTTCAGTATTGCTGTGGTCCTAGCATTCTGGCACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025409