Os09g0491532

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0491532| Description = Similar to Squamosa-promoter binding protein 2| Version = NM_001188980.1 GI:297727090 GeneID:9266075| Length = 3494 ...")
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Gene Name

Os09g0491532

Description

Similar to Squamosa-promoter binding protein 2

Version

NM_001188980.1 GI:297727090 GeneID:9266075

Length

3494 bp

Definition

Oryza sativa Japonica Group Os09g0491532, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19571972..19575465

Sequence Coding Region

19572246..19572931,19573015..19573151,19575010..19575096,19575307..19575368

Expression

GEO Profiles:Os09g0491532

Genome Context

<gbrowseImage1> name=NC_008402:19571972..19575465 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19571972..19575465 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaccggcggcagcggcggcggcggcggaggtggaggtggtggtgacgatgtccacggccgccacaaggtgtgctacatgcacgccaaggagcccatcgtcgtcgtcgccggcctcgagcagcgcttctgccaacagtgcagcaggttccaccaattacctgaatttgatcaagaaaaaaaaagctgccgcagacgccttgcaggtcacaatgaacgccggaggaagccgacacctggacctctttcttctcgctatggccggcttgctgcatcctttcatgaagagccaggcaggtccagaagctttgtggtagatttctcatacccaagggttccaagcagtgtgagggatgcgtggcctgctattcagcccagcgatcgcatgtccggttcaatccagtggcaagggggccatgaactccatcctcaccgcagcgcagttgcgggatacagtgatcaccatgcgttcagcagccatggtggctcagcggctggggcaccaatgctccaccacccagcctttgagctcacctcaggtggatgtctcgcgggagtcgccaccgactccagctgtgctctctctcttctgtcaactcagccatgggatactacccaaagcaccagcagccacaaccggtccccgccaatgtcgtcaacggccagcgccttcggaggcggcaacaacccggtgtcgccctcggtcatggcaagcaactacatggcggcgagccccggctggaacagctccagccggggccatgacggcgccaggaacgtgcacctgccgccaccgcacggggttgtgctgaacgaggtccctccgggctctgtccaccacggccatttctccggcgagctcgagctcgcactgcagggaggtgccccgtccaaccggccggaagccgagcatggctccggcagcggcgccttcagccactccaccaatgccatgaactggtctctgtag</cdnaseq>

Protein Sequence

<aaseq>MATGGSGGGGGGGGGGDDVHGRHKVCYMHAKEPIVVVAGLEQRF CQQCSRFHQLPEFDQEKKSCRRRLAGHNERRRKPTPGPLSSRYGRLAASFHEEPGRSR SFVVDFSYPRVPSSVRDAWPAIQPSDRMSGSIQWQGGHELHPHRSAVAGYSDHHAFSS HGGSAAGAPMLHHPAFELTSGGCLAGVATDSSCALSLLSTQPWDTTQSTSSHNRSPPM SSTASAFGGGNNPVSPSVMASNYMAASPGWNSSSRGHDGARNVHLPPPHGVVLNEVPP GSVHHGHFSGELELALQGGAPSNRPEAEHGSGSGAFSHSTNAMNWSL</aaseq>

Gene Sequence

<dnaseqindica>2535..3220#2315..2451#370..456#98..159#gagtgagggagcggcaataaaaagaagagagagagagagagagagagaggctaggcagctagcaggaggaggaagggaccgaccaccgcctgccgcaatggcgaccggcggcagcggcggcggcggcggaggtggaggtggtggtgacgatgtccacgggctcaagttcggcaagaagatctacttcgagcaggacgcggcggcgtcggcgtcggcggcggcggtggagtcgtcgtcgacgtcgtcgggcggaggcggcaagaaggggaagggcgtggcggcggcggcggcgcccccgccgccgctgccgccgaggtgccaggtggagggttgcggcgtggatctgagcggcgtcaagccgtactactgccgccacaaggtgtgctacatgcacgccaaggagcccatcgtcgtcgtcgccggcctcgagcagcgcttctgccaacagtgcagcaggtaaaaaaccaaaaaccaaaaccaaaatcttcttcttcttcctcctcctcgtcgccgtcgtccagccattgcccctgcttcctctgctgctctactgttccacctgtgagcgcgtgagtgtgacagacactcaccaatccaccgtgtgattcgcccaactttcaaacggttcctgccaaaattcaaaaaaactccccactagatttggctacctcagcaagctctgattttaggacaagaaaaaagaaacaacctctgcaacttgcaaaaacgtagcagcaacgttggatttcaggcaaattaaattttgccgttttgtccctggccagattgagagattttcatgccctgtgtgtagtgtactgctgctgggtttgatagtagtagcgatcaatgtgaaatttaggacatgtggaacctgactagaatagtaagggacataaaagtgtccatccagaatatcttgtctgaggagcacacatatagtaagtctagatctcctttttttctattctagtagtatgtggaatgtggtaggatatgaagtatatatggggtagtagtaaggtactacactgtactactatgcactatttaatgccctaaaatggaagtagggcagcagagaaattgaggtggaaaacaaatcggatgaaatagtaactacaaaaccttgctaattaggaatgtttgctgacatggatgagagagaagcaaggagatgcaaacatggtagcttcgattaaacaaccgcttagcaacgactcttaacctctatagaatggaaacttttctgcatgagggttttaacaaggaaataatagtaataattttgtttttatgaatgcattgtttaaataaagtctttgttgtcgatctcaacagttgtaaggacatagtctctgaataaacatgtattatttaaaagactatatgggttctacctttgaacatgcccagcaataacgaagttggtcaatcatgctaaccaataattctcatttggttcatcagaaatcccatatacttactctaattttgtcctatatgttttcattttgtatagtagatactagaacacaaacacttatgcttatgctacataatctaaaatatcaaaatgaaataacatcatctgctatattgcatccaacaatttgtttggaaaaaatgcatactatttcatagttggtggcttgtggagttgtggacatatgcattaccggaaaatagaaggttctgactgttgtgttatttataaatctgctctgccgtagataaaacatctcttgactatttgatgtactaactaaagcctttgtttgtgctaaagtactatgggaatgattgcaggtgctctgtccacatggttaggtaacctttttattttcccggtcgtggtgtatgtgtatctaatcatgaaaggcgtgtctttggttagtgttgctacttagaacaaatacacattagtctaggattaaaaaaaagttgttatgcttgcatcgacgcagcttttcacatggcatgtggtttgatttatttatctgatgcacgctccgtattaagataagcagcaggggtagctgattcttgattacagagttggcactcctacttttcatgtgcttgcaattttctaaagtaaggtcactacaataagcaatagccccaccaaaaatgctcttcagcgtgctttttttttattgagttaaattgattattgcttttcattgtcagtgtagagtattttttatagcatgacattcttcattaggaaaactccttgtattcaattatatcctgcagtgtcactacgcttgtggtaattcactaatattttggccacttcaaatcacaggttccaccaattacctgaatttgatcaagaaaaaaaaagctgccgcagacgccttgcaggtcacaatgaacgccggaggaagccgacacctggacctctttcttctcgctatggccggcttgctgcatcctttcatggtaaaatgtggctcatgtttgtcctgttactctgaacttcagatgagtgtattgacttgttgcccctgcaacttttgtttcagaagagccaggcaggtccagaagctttgtggtagatttctcatacccaagggttccaagcagtgtgagggatgcgtggcctgctattcagcccagcgatcgcatgtccggttcaatccagtggcaagggggccatgaactccatcctcaccgcagcgcagttgcgggatacagtgatcaccatgcgttcagcagccatggtggctcagcggctggggcaccaatgctccaccacccagcctttgagctcacctcaggtggatgtctcgcgggagtcgccaccgactccagctgtgctctctctcttctgtcaactcagccatgggatactacccaaagcaccagcagccacaaccggtccccgccaatgtcgtcaacggccagcgccttcggaggcggcaacaacccggtgtcgccctcggtcatggcaagcaactacatggcggcgagccccggctggaacagctccagccggggccatgacggcgccaggaacgtgcacctgccgccaccgcacggggttgtgctgaacgaggtccctccgggctctgtccaccacggccatttctccggcgagctcgagctcgcactgcagggaggtgccccgtccaaccggccggaagccgagcatggctccggcagcggcgccttcagccactccaccaatgccatgaactggtctctgtagagaccattgatcatcttcttccccaccgtcactgcgccttcatgccaagagacatggaacattgggcagcctagttttgtgctccttaacattgccatttaggttttcaggatggagagggaattcgtaactgattaggccagtaatttcctctcgttgagcctgatgtgtccatgaattcaaaacacccgaagagatccactacctgtagaactccataaactgggagaattgatgtgttttacttgacctattttaatctcggattcatctt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0491532, RefSeq:Os09g0491532