Os06g0152200

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0152200| Description = Zinc-finger protein R2931| Version = NM_001063369.1 GI:115466469 GeneID:4340156| Length = 4009 bp| Definition = Ory...")
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Gene Name

Os06g0152200

Description

Zinc-finger protein R2931

Version

NM_001063369.1 GI:115466469 GeneID:4340156

Length

4009 bp

Definition

Oryza sativa Japonica Group Os06g0152200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2694461..2698469

Sequence Coding Region

2694555..2694764,2696348..2696941,2697919..2698197

Expression

GEO Profiles:Os06g0152200

Genome Context

<gbrowseImage1> name=NC_008399:2694461..2698469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2694461..2698469 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgacgaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccgggaagcaccagcgggtgccgctgctctccgacgacggcggcgccgcgcccgccgccgccgccccggccgtgcccaagtgcgacatctgccaggaggcttctggatacttcttctgcctggaggaccgtgcacttctttgcagagattgtgatgtttctatacacacagtaaactcctttgtttcagtacaccaaagattcctactaacaggtgttcaagttggccttgatcctgctgatccagttccacctgttgctgacaagcatgttaagagtgctggtggttcagtggattcagcaactaaacatttgcaaaggaatcctacagacttatctggtgaaaacagtgcatctttgcccagccaaaatgtaatcaatggtaattattctaggcagagttctgttacaatggccaagacaggacaggtcaattggactatgagcaacaacacaattagatcaatagaccctccacccaagtattcatcagaggaaagtccagcacttctgctagctagccacactagcaccatggcagcgtactccagtcaaatcagtaaggatagtgatcggatctacaacttaccattcacaggtggtaatgggtcagatagtctacatgattggcatgttgatgagttctttagtaactcagaatttggctttgctgagcatggttcttctaagggtgacaacgctaagccagggagtgctggtggatctccgcagtgccgtctggctgaaggcctgtttgtcgaaggacttctaggtcaagtgcctgacaatccatggacagtgcctgaggtcccctcgccaccgacagcctctggtctctattggcaaaataatttgctttgcccttcgtacgacagcaccatgttcgtccctgagatttcctccttggagaactctcagaacaacttcactgtatctgctggtttgaagcgccgaaggaggcagttttga</cdnaseq>

Protein Sequence

<aaseq>MKIQCNACGAAEARVLCCADEAALCTACDEEVHAANKLAGKHQR VPLLSDDGGAAPAAAAPAVPKCDICQEASGYFFCLEDRALLCRDCDVSIHTVNSFVSV HQRFLLTGVQVGLDPADPVPPVADKHVKSAGGSVDSATKHLQRNPTDLSGENSASLPS QNVINGNYSRQSSVTMAKTGQVNWTMSNNTIRSIDPPPKYSSEESPALLLASHTSTMA AYSSQISKDSDRIYNLPFTGGNGSDSLHDWHVDEFFSNSEFGFAEHGSSKGDNAKPGS AGGSPQCRLAEGLFVEGLLGQVPDNPWTVPEVPSPPTASGLYWQNNLLCPSYDSTMFV PEISSLENSQNNFTVSAGLKRRRRQF</aaseq>

Gene Sequence

<dnaseqindica>95..304#1888..2481#3459..3737#atacagtggagagataggggaagagagggagcgatccaatcgcgtcgctaaaaccctagcggctggctgatttgggggattgctcgtcggagagatgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgacgaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccgggaagcaccagcgggtgccgctgctctccgacgacggcggcgccgcgcccgccgccgccgccccggccgtgcccaagtgcgacatctgccaggtcgcccccctcccctcccctcccctcctcgctctttctgcctcgattagggtagttgaggcgtgcaggaaattttgcctcgatttgtttgatagtagttttggatgttcttaccgagtatagtcagttagcaaagcgaaattactacgtttatcagcgattagaagaagctattcttccatgttgatcaagctgtgctggcacacgtttatcagcgattagaagaagctactcttccatgttgatcaagctgtgccggcactggagagggggtagtaactagtaagcatatggaagcacaaataggaattcctgtatatcctgagctaaaaattgagggggttgctattgatactatgatgaacatctataagtaaaaccccatttcgccgaggtgttttcttatcttgtgttgtatgcttaagcttcttaatcacaattagccaatttcacatctagttaaccactatatattttttatcagtggaaggatcaaactctctttaaggatacaaactgaattctcacagacttggatagtatgaggtaaaaaggaggttagaaaagattgacagttcatagttatggtttatattgtgcttgatgaatgaacactagagtgaagagacaagtctggtaatgatcttttctgttggtgctgtgtgaaagtatacggtccctaatatgatatcaaatgagatgatataaaataaacggtgaagtgatgactatctggtaaccctagctaaagctatgctttgccatttcaatcatctaaactagggcaaatatttgaacattacagttgcataggtttcttacactgaggacacatattgtaaagtagcaccgtaccaacatttaatagagtgatgtcatgctgcacattaagaccagctttttttttttccgatgctctgaggtagactgtaagccttgtgcagttttacatagcaaatcctagtatgtagtgactgtatgtgttttataggcttatcgggtcatttctagttgacagattgttatatgtaaaacttattgtttggaatacctaaaaaaaaataaggaaaaagtatatgctatttgctttgcatgtttatttgtgctgcactttaagtccaagatcttgcaaatgttttcttggttttttgcatatcaacgtgattatgcggtaagaaaattaaattttgaggcctctagcaaaaacatagaaagtcattggttggatagatacttatttatagtttatctgaaccccatcctttatttccataaggacgtttgtccaactgtattgttctattttagacggtgagatatggtaccagactggataggttggatgtagatcttttatgatgacatgatgaaatatggcactgttcagttggctgtgtcatgtgcaactgtgtaaagtccatgtgcaaagaaagggacaactaatggtctgattattggacacatgactgaagtgaacccacataggtttcattgcatctcgttggttcctgctggaactgcaagttgtgctatttatccttgatttattaggcgcagatctcaaactttatttgtcattgcaggaggcttctggatacttcttctgcctggaggaccgtgcacttctttgcagagattgtgatgtttctatacacacagtaaactcctttgtttcagtacaccaaagattcctactaacaggtgttcaagttggccttgatcctgctgatccagttccacctgttgctgacaagcatgttaagagtgctggtggttcagtggattcagcaactaaacatttgcaaaggaatcctacagacttatctggtgaaaacagtgcatctttgcccagccaaaatgtaatcaatggtaattattctaggcagagttctgttacaatggccaagacaggacaggtcaattggactatgagcaacaacacaattagatcaatagaccctccacccaagtattcatcagaggaaagtccagcacttctgctagctagccacactagcaccatggcagcgtactccagtcaaatcagtaaggatagtgatcggatctacaacttaccattcacaggtggtaatgggtcagatagtctacatgattggcatgttgatgagttctttagtaactcagaatttggctttgctgagcatggttcttctaaggtattccaaaatattatatatatgtaaattgctggttgcctgtttttcctgttatcaacagtatgtcgtgcttatttagtaattttttggaatgcagagtttaagcatgatactttgattaatattagagtactgatacaggacatgcacacactctctctctcacactctctcacacacacagacaaatacctgtcgaattgttagttgttcagtgaatgcatttaaaattaggagtttttactgtgatacaattagacttctgttataatttagtttattctagatgtttagatgttaacctttccgtcattcgttaagtgaaaacctgtacctaagcttatctgtgtttatgattaatgagaatttcttacctagttgctccttccaattgatatatgctgatggaactgtgcaatgctcaagtcctagaatcaatctagcatgctgatgctttgggggtttggattctatgacaatcttttgctgaaatataaattgtttaccgtaactatcaagcttataagacagtaacttaaagtctgtggaagtgattgctgttcccttggcgtatgctgtttcatgtgtgcttttggatgaattccaccacctttgctatatacagttcattgcgactaattttagagctgtcaatcatgatttttctagcatgtcttgttcgattatgcaatgtgactgaaccatactccctctgtcccaaaaaaaggcaacctagtactaggatgtgtcacgtcgtagtacgaggttgagtttttttgggacggagggagtactgctgacagaatgagggctagatttttgtgtggcatttacatcgatgcttaatttatttgcaagtagactttctattaccaaagaagctcactattgaatatctttctcttctcctgctgggttgaatttctccatttaggtttgcttcttatgccgttgttgttttggctgtgcacttacagggtgacaacgctaagccagggagtgctggtggatctccgcagtgccgtctggctgaaggcctgtttgtcgaaggacttctaggtcaagtgcctgacaatccatggacagtgcctgaggtcccctcgccaccgacagcctctggtctctattggcaaaataatttgctttgcccttcgtacgacagcaccatgttcgtccctgagatttcctccttggagaactctcagaacaacttcactgtatctgctggtttgaagcgccgaaggaggcagttttgatctgccgatagcatcagacaccattcggtttagttggcaggtcacgttgagaggagggcttcttgcctgcctgaccaaagccacaaaacacagggatggatgatcatccagtggtcagtctaaaaatatgttgtaatgtttgtgtttcgactatacgtttgttgctgaagtttaaaggcgagggaattgttgtgagatctgggatgacagatttgttgttaccaattttgtgaatagtgaaaataaaaagagcatggataagatcatgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0152200, RefSeq:Os06g0152200