Os06g0152700

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Revision as of 09:04, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0152700| Description = Protein of unknown function DUF821, CAP10-like family protein| Version = NM_001063373.1 GI:115466477 GeneID:4340161| ...")
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Gene Name

Os06g0152700

Description

Protein of unknown function DUF821, CAP10-like family protein

Version

NM_001063373.1 GI:115466477 GeneID:4340161

Length

3742 bp

Definition

Oryza sativa Japonica Group Os06g0152700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2716877..2720618

Sequence Coding Region

2717019..2717574,2718174..2718238,2718374..2719147,2720220..2720468

Expression

GEO Profiles:Os06g0152700

Genome Context

<gbrowseImage1> name=NC_008399:2716877..2720618 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2716877..2720618 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcatgagccgatgagcagaagcagctccagcttcttcaggcgggacgccgccggcaacgaggagagggcggcgctgacgacgccgccgccgctgccggcggaggacgacatgggcggcgctccggccggacggcggcggtggccgtcgtcggtgatgaggatgaagggcgtcggttccgtcatggtcggcgtcgtcttcctcgcgttgctcatcctcgtacacagatgggtcggcctcgacgcttcgtttctacgtgacagcagcatggtgaggaccagcacgcgacaatggcatccccaccacaacatctccacgccgccgctgatgacactgccgcccttctcctgcggcaacggcacggcggcgccggcgacgtgccccgcgacgccgccatcgccgccgccgacgtcgaagcccgccaccggcggcgagccagcggcgtcgtgcccggactacttccggtacatccacgacgacctccggccgtggcgcggcgccgggatcacgcgcgaggcggtggagcgcggccggcgccacgcctacttccggctggtggtggtgtccggccgcgcctacgtggagacgtaccggcgctcgtaccagacgcgcgacgcgttcacacagtggggcgtcgcgcagctgctgcgccgctacgccggccgcgtccccgacgtggacatcatgttcgcctgcgacgaccggggccgggtgcgcgccgccgacttcgccgcggcgccggcggacgcgccgccggtgttccggtactgcagggacgcgacgacgctggacgtcgtgttcccggactggtcgttctgggggtggccggaggtgaacatcggcgcgtggccggcgacgctggaggcggtgcgccgcgagagcgcgcgcgtgcggtggccggagcgcgagccgttcgcgttctggaagggcaaccccggcgtcgcgcgcatccgcggcgagctcatgaagtgcaacccggcgtccgatggcaaagactggaacgctcgtctctttagccaggattggaatcatgccatacataacggcttcaaagattctagcataccgaagcaatgcttacacaggtacaagatatacatagagggggaagcatggtcggtgagcgagaagtacatcatggcatgcgactcgccggtgctgttcgtcaacaccccgtaccaggacatcctctcccggggactcgtcgccggcgagcactactggccgatcaaccggacccggatgtgcgagtccatcagggccgccgtcgactggggcaacgcccacccggcggcggcgcgccgcatcggcgagcaggggagccggttcgtgcgggagcagatggccatggactacgtctacgactacatgttccacctcattaccgagtacgccaagctgctccggtacaagcctaccgtgccggcgaacgcagttgagatctgtgccgagagcatggcgtgcgccgccgcggcggggagggagagggagtgcatggatgagtccgtggaggggttcgtcgccgggtttgatccgtgctcgctgccgccgccgttcacggaggaggagaagagggagatcgccgctaaggaggaggaggtgctgaggaaggtggcgaagttggaggaggagaacatgtag</cdnaseq>

Protein Sequence

<aaseq>MTHEPMSRSSSSFFRRDAAGNEERAALTTPPPLPAEDDMGGAPA GRRRWPSSVMRMKGVGSVMVGVVFLALLILVHRWVGLDASFLRDSSMVRTSTRQWHPH HNISTPPLMTLPPFSCGNGTAAPATCPATPPSPPPTSKPATGGEPAASCPDYFRYIHD DLRPWRGAGITREAVERGRRHAYFRLVVVSGRAYVETYRRSYQTRDAFTQWGVAQLLR RYAGRVPDVDIMFACDDRGRVRAADFAAAPADAPPVFRYCRDATTLDVVFPDWSFWGW PEVNIGAWPATLEAVRRESARVRWPEREPFAFWKGNPGVARIRGELMKCNPASDGKDW NARLFSQDWNHAIHNGFKDSSIPKQCLHRYKIYIEGEAWSVSEKYIMACDSPVLFVNT PYQDILSRGLVAGEHYWPINRTRMCESIRAAVDWGNAHPAAARRIGEQGSRFVREQMA MDYVYDYMFHLITEYAKLLRYKPTVPANAVEICAESMACAAAAGRERECMDESVEGFV AGFDPCSLPPPFTEEEKREIAAKEEEVLRKVAKLEEENM</aaseq>

Gene Sequence

<dnaseqindica>3045..3600#2381..2445#1472..2245#151..399#atttgcagattaattccgatcgaaattaaagttgcatcgtctctgcaaactctgcagctacgtgttatctcctcctctcttagcttctcctaattttttcgctagtttcgtttcacttcagacttcagagcagttgcaccgtgcacatgcatgacgcatgagccgatgagcagaagcagctccagcttcttcaggcgggacgccgccggcaacgaggagagggcggcgctgacgacgccgccgccgctgccggcggaggacgacatgggcggcgctccggccggacggcggcggtggccgtcgtcggtgatgaggatgaagggcgtcggttccgtcatggtcggcgtcgtcttcctcgcgttgctcatcctcgtacacagatgggtcggcctcgacgctgtaagcatctgcaattacgcatcttactgattttttttttatgaacacgtaaaagaagtacacttcaatatattaaaagaaaaaagttttaattacataacgcattcagctagatcgacttatgtcagaggggaagggagaaaagcatcttactgatcattttgtgttttttgtgtcaagatttttttattattattatttttttttgcattctttggctgtgatcaactgttccaacttccaacatcaagatcaagtcaatatgttgttatatgttgcgtgttaattaggacaaggattgaaaacgagtgctgcatgaccaagaaaactagtaagaaacagggtaacttgtgctaatcgatcgcattccataattccaataccaacaggcgtttgatagtgccatgtggcaacaagttactgctggctagccaagtcaaacaagtgacgttgtactcgatcagagtctcagaccagagttaatcaaactattgaacattgaagtacttcgatcaccgctaataatgtccttaatcaccaatgttctagatcagctacgtgtgctcatattgttctttctactactaacttgaaagtggattttaaaatctccggtgaatgttctgttatagtttgcatatcacttaaatagtcataatattaaaaacaattgattgaaattcaacttttaggagtttaaaaaaaaataaactacagccagttaacatatatttattgttaaataattttttttcaacatgtagaagttaaatttaatcttgtatgtttgtgaagtaatctatgacatattaatatatatttttgttttttttcttatttttttcataaccttttgagtggcatgtaataagtaacgaggggacattctctcgagagtttagaatagtttcttctattgacatctatacaaaatgaaattaaaatgacacgttttgatttatcaaattagaaattaattggaaacaaaaactgtatttgggtcatatatagagctcaaagatttacgagtacgtgttcctgaatcctgatccatatgcttgcacacgtacagtcgtttctacgtgacagcagcatggtgaggaccagcacgcgacaatggcatccccaccacaacatctccacgccgccgctgatgacactgccgcccttctcctgcggcaacggcacggcggcgccggcgacgtgccccgcgacgccgccatcgccgccgccgacgtcgaagcccgccaccggcggcgagccagcggcgtcgtgcccggactacttccggtacatccacgacgacctccggccgtggcgcggcgccgggatcacgcgcgaggcggtggagcgcggccggcgccacgcctacttccggctggtggtggtgtccggccgcgcctacgtggagacgtaccggcgctcgtaccagacgcgcgacgcgttcacacagtggggcgtcgcgcagctgctgcgccgctacgccggccgcgtccccgacgtggacatcatgttcgcctgcgacgaccggggccgggtgcgcgccgccgacttcgccgcggcgccggcggacgcgccgccggtgttccggtactgcagggacgcgacgacgctggacgtcgtgttcccggactggtcgttctgggggtggccggaggtgaacatcggcgcgtggccggcgacgctggaggcggtgcgccgcgagagcgcgcgcgtgcggtggccggagcgcgagccgttcgcgttctggaagggcaaccccggcgtcgcgcgcatccgcggcgagctcatgaagtgcaacccggcgtccgatggcaaagactggaacgctcgtctctttagccaggtactccgtactttcaaaaaggaaaaaaatatcataacattaattgaaggggctatctatatgggattcactcgatttttttgttagtatttagtcattgatgtcaaattgcaaaattctcatgtcattttgtaggattggaatcatgccatacataacggcttcaaagattctagcataccgaagcaatgcttacacaggtaatgtgtcatatacatgtgtaaattctcaagtatatactacgtacgatattatttttaagatgacaccatttattttcagagcaatgtttgaccattcgtctaactaaaagatttaatgtaaatatgctaaagtatagctcatacttaatatttatttacaataaaataagtcacaagaaaatatataacaggttatgtagtgtttggttttataaaatgaaggtcaaacgatacaccagtcaatgatgtcatttattaagaaacagatagattatcattttatcgcatgatctgtaaaaactatacgtgaaaacaaagcaattttacagaaatttttagacaaaataaactaattcacattaaaatcatgtaaaaaaatcatgcattattctaggtgagctctaaaccgtcttatgtgaaaattctgcaatactttcgattatttaccatacacattataaacgtagccactcatatacacgctctctcgactacacggacaaatggacagcatgcataatacattcatggtgtcaaaaaacatatatgattttttgtcaaacataaggctgcaaaattaatcaatcgatttgcaggtacaagatatacatagagggggaagcatggtcggtgagcgagaagtacatcatggcatgcgactcgccggtgctgttcgtcaacaccccgtaccaggacatcctctcccggggactcgtcgccggcgagcactactggccgatcaaccggacccggatgtgcgagtccatcagggccgccgtcgactggggcaacgcccacccggcggcggcgcgccgcatcggcgagcaggggagccggttcgtgcgggagcagatggccatggactacgtctacgactacatgttccacctcattaccgagtacgccaagctgctccggtacaagcctaccgtgccggcgaacgcagttgagatctgtgccgagagcatggcgtgcgccgccgcggcggggagggagagggagtgcatggatgagtccgtggaggggttcgtcgccgggtttgatccgtgctcgctgccgccgccgttcacggaggaggagaagagggagatcgccgctaaggaggaggaggtgctgaggaaggtggcgaagttggaggaggagaacatgtagcaaagcgaatggaaaatgatactggatttttaaaagatgattattcacaatgtaagactttctaacattgttcattattcatatggatgttaatgaacgtgtgcaatgcagtcttacagtgtgaacggaggaaataaagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0152700, RefSeq:Os06g0152700