Os06g0158300

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Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0158300| Description = Disease resistance protein family protein| Version = NM_001063400.1 GI:115466531 GeneID:4340190| Length = 5783 bp| ...")
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Gene Name

Os06g0158300

Description

Disease resistance protein family protein

Version

NM_001063400.1 GI:115466531 GeneID:4340190

Length

5783 bp

Definition

Oryza sativa Japonica Group Os06g0158300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2972686..2978468

Sequence Coding Region

2972886..2974860,2975832..2976721

Expression

GEO Profiles:Os06g0158300

Genome Context

<gbrowseImage1> name=NC_008399:2972686..2978468 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2972686..2978468 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggtgctgtcttcagtttgacggagggtgcagtcaggagcctgctgtgcaagcttggctgccttctaactgaggatacttggctggtgcagggtgtccatggtgagatacagtacatcaaggatgagctcgagtgcatgaatgcattcctacgcaatctgaccatatcacagattcatgacgaccaagttaggatctggatgaagcaggtgagggagatagcctacgactctgaggattgtattgatgagttcatccataacctaggggagtcatcagaaatgggattttttggtgggctcatatctatgcttcgcaagctagcctgtcgtcaccgaattgctctccagctacaagaactgaaggcccgtgctcaggatgtcggtgaccggcgttcaaggtacggggtggagctagcaaaggccacacatgaagaagcacatccaagactcaccaggcatgcctctctccatatcgatccacagttgcatgctctcttcgcggaggaggctcagctggttggcatcgatgagcctaggaatgagctcgtcagctggctgatggaagaggaccttcggcttcgtgtgcttgctattgtcgggtttggtggccttgggaagacgacgctggcaaggatggtgtgtggaagccctgtggtgaagagtgctgattttcagtgctgtccattgttcatcatttcacagacgttcaacatcagggcactttttcagcacatggtaagggagctaatccaggagccacacaaggcgatggcaatagcaggatgcaagcatggccttattacagatgattacctggagggaatggaaaggtgggaggttgcagcactgactaagaatctcaggaggtatttccaagacaaaaggtacattgtgatccttgatgacatatggactgtatcggcatgggagagcatcagatgtgcattgcctgacaacttaaagggtagcaggataatagtaaccacccggaatgcagatgtggccaacacgtgctgttctcgtccccaagatcggatttacaatatccagcgactatcagaaacgacatcacgagaactgttcttcaagaagatatttggttttgcagatgataaatcaccaactgatgagtttgaggaagtgtcaaattccgttttgaagaaatgtggaggcttgccattagcaatagtgaacatcggcagccttctcgcaagcaagacaaataggaccaaggaggagtggcagaaggtttgtaacaacttaggatctgaacttgaaaacaaccctaccctggaaggagtgaagcaagtcttaaccttgagctacaatgatctaccctatcatctgaaggcctgcttcttgtatctaagtattttccctgaaaattatgtgatcaagaggggacccttggtgagaaggtggatagctgaaggtttcgtcagccaaaggcatggacaaagcatggaacagcttgcagaaagttactttgatgagtttgtggctagaagcattgtgcagcctgtgaggactgattggactggcaaggtgaggagctgcagagttcatgatttgatgttagatgtcattgtctccaggtcaattgaggagaactttgcatcattcttatgtgacaatgggagtacattggcttcccatgacaaaatccgtcgcctctccatccacagcagttacaattcgtctcaaaaaacaagtgccaatgtatctcatgctcgctccttcacgatgtctgcttctgttgaggaagtcccattcttctttccgcagctacggttattaagagtacttgacttgcaaggctgcagctgcttgagtaacgaaactttgcattgtatgtgcaggtttttccagctgaagtacctaagcctcagaaataccaacgtgtccaaattacctcatcttctagggaatctgaaacacctagagacgctggacattagggcaactcttatcaagaagctaccagctagtgcaggcaacctgagttgtctcaagcatttgtttgcggggcacaaggtacagcttacaaggacagccagtgtgaagttcttgagacaatcttcaggtttggaggtggcgactggggtggtcaagaacatggtggctctgcaatcacttgtccatatagtagtcaaggataaatcgccagtactgcgggaaattggcctgctgcaaaatctgacaaagctcaatgttctcttgcgcggtgtggaagagaactggaacgcattccttgagtctctgagcaagttgcctggccctcttcgctctctctccatccacactctggatgagaaggagcacagcttatcactggataatctagcctttgttgagtcgcctcctctattcataaccaagtttagcctggccggtgagttggaaaggctacctccatggataccatcgcttcgaaacgtatccaggtttgctcttcgtcgcaccgaactccatgctgatgccataggagttcttggggacctgccaaatctgctctgcctcaagctctatcacaaatcatatgctgacaactgcatagttttttgtcacggtaaattcgtgaagctcaagctgttgatcattgataatctggagaggatagagaagatgcagttcgatgcgggttcagtgactaatctggagaggctgacattgtcattcctgcgagaacccaagtatgggatttcaggtctggagaatctaccaaagctgaaggagatcgagttctttggcgacatcatattatctgtggtgaccaaagtggcatcatgcgtgaaggcgcatcctaaccacccaagagtcataggtgacaaatggaatattgtaacggagtatgcgtaa</cdnaseq>

Protein Sequence

<aaseq>MEGAVFSLTEGAVRSLLCKLGCLLTEDTWLVQGVHGEIQYIKDE LECMNAFLRNLTISQIHDDQVRIWMKQVREIAYDSEDCIDEFIHNLGESSEMGFFGGL ISMLRKLACRHRIALQLQELKARAQDVGDRRSRYGVELAKATHEEAHPRLTRHASLHI DPQLHALFAEEAQLVGIDEPRNELVSWLMEEDLRLRVLAIVGFGGLGKTTLARMVCGS PVVKSADFQCCPLFIISQTFNIRALFQHMVRELIQEPHKAMAIAGCKHGLITDDYLEG MERWEVAALTKNLRRYFQDKRYIVILDDIWTVSAWESIRCALPDNLKGSRIIVTTRNA DVANTCCSRPQDRIYNIQRLSETTSRELFFKKIFGFADDKSPTDEFEEVSNSVLKKCG GLPLAIVNIGSLLASKTNRTKEEWQKVCNNLGSELENNPTLEGVKQVLTLSYNDLPYH LKACFLYLSIFPENYVIKRGPLVRRWIAEGFVSQRHGQSMEQLAESYFDEFVARSIVQ PVRTDWTGKVRSCRVHDLMLDVIVSRSIEENFASFLCDNGSTLASHDKIRRLSIHSSY NSSQKTSANVSHARSFTMSASVEEVPFFFPQLRLLRVLDLQGCSCLSNETLHCMCRFF QLKYLSLRNTNVSKLPHLLGNLKHLETLDIRATLIKKLPASAGNLSCLKHLFAGHKVQ LTRTASVKFLRQSSGLEVATGVVKNMVALQSLVHIVVKDKSPVLREIGLLQNLTKLNV LLRGVEENWNAFLESLSKLPGPLRSLSIHTLDEKEHSLSLDNLAFVESPPLFITKFSL AGELERLPPWIPSLRNVSRFALRRTELHADAIGVLGDLPNLLCLKLYHKSYADNCIVF CHGKFVKLKLLIIDNLERIEKMQFDAGSVTNLERLTLSFLREPKYGISGLENLPKLKE IEFFGDIILSVVTKVASCVKAHPNHPRVIGDKWNIVTEYA</aaseq>

Gene Sequence

<dnaseqindica>3609..5583#1748..2637#cgcgtccttactgtctctttcggaaaagagagagagagagagagagagccgcagccgcagccctccgcgccggcgatggcggcggcggaggacgtgccgggtagagattccggccggatgcgcatgcgcatgcgcagaagattcaagggagccgggtgaagcacggatcgtggtggtggctaatcgaagagcgcgcgcgggtgggcggctctgtgcttcatgtgttcgatgaaatgcgtcacccagctagtctacgagaagggcctgactaggtagcggcggcgagcagctggccctgaatgtttcgcaagggagagatcagagatgtcgcaggtgtaacaaccaagctctcctaggtcttgctcgactcggcccccgctgaagtgcttcacaatccaaggtgcttgatttgtcttcttccatgtcaactttcttttgcgctctcaaatggaaccattgagctcctggagtctctttcacaggactggatatgctgtggctcggtttcatcttttatgcaaatctttaaggggaaaaagaagagagtcaaacactacagtcaagatgatgctggtaactgtgcctgtttttccaatggttgcttgattgcctttctgcatttatgtcgacatcgccatttctttcaaggtgactagtactaggttattatacaaaattacaaggggaacacgcaatgctttaaccattgttatcttatttgtgcaattgcgatcggtgcatattaagctgtaaagtatatggaaccacctcgagtagcttgttgccttcctgcactattctcttatatgttaacttcgcttcacttgcatatatgcctttacagttcattgtgtcacactagctaacagttttgattatttatatataatatgcttcaatactttgacttgcatttcatctttattaactaaaccttgctttgctgtcgccacgtcctatctgtgattatgttagtgttcatctgcttattgctaccatagttttctcactctgctttatatatggtgttgtacaatgttcacattgttaaaacaagtagcactctaatctcataggtcagatgtaagaaggcgggcgaaatactttaccaatcttaccaagctattcatcacaaaaatacgactgttgtcctataccgccttctttccatttcacgtatgagttgtgttgtcaaaatgtcagagttacctagctgttttctgtcctcttttcagtgctgcttgtccttgtctgggtacttgtttggatcaccctttcatccagctatgaatgtaacaaaccttagggtatcacttgttcatactcttccccactgcttttataccttctctaagtattactggatcttttaccaatttttaagctgcctttggcctcttacatatacatacagcaatgagttttccgtactgattgactttttctatgagttgtaactttttatgatattcttatgcaccacaggaatactattatttgcttatcaggcttgtaagacatgaagtcaagttgccttgtcagcatgtttcagggttctgtttgccatcagcggcgaaccgcaggtctccttgtcattgcatgtctccttgaccaggaaaaccatggtctgaattctggaatgttcttattcttccaccattagctaaccaaatgtcttacaaatataacctgagcatcctaacttcaacagcagcagtgtttccatttccatgctccatagtaagatatggagggtgctgtcttcagtttgacggagggtgcagtcaggagcctgctgtgcaagcttggctgccttctaactgaggatacttggctggtgcagggtgtccatggtgagatacagtacatcaaggatgagctcgagtgcatgaatgcattcctacgcaatctgaccatatcacagattcatgacgaccaagttaggatctggatgaagcaggtgagggagatagcctacgactctgaggattgtattgatgagttcatccataacctaggggagtcatcagaaatgggattttttggtgggctcatatctatgcttcgcaagctagcctgtcgtcaccgaattgctctccagctacaagaactgaaggcccgtgctcaggatgtcggtgaccggcgttcaaggtacggggtggagctagcaaaggccacacatgaagaagcacatccaagactcaccaggcatgcctctctccatatcgatccacagttgcatgctctcttcgcggaggaggctcagctggttggcatcgatgagcctaggaatgagctcgtcagctggctgatggaagaggaccttcggcttcgtgtgcttgctattgtcgggtttggtggccttgggaagacgacgctggcaaggatggtgtgtggaagccctgtggtgaagagtgctgattttcagtgctgtccattgttcatcatttcacagacgttcaacatcagggcactttttcagcacatggtaagggagctaatccaggagccacacaaggcgatggcaatagcaggatgcaagcatggccttattacagatgattacctggagggaatggaaaggtgggaggttgcagcactgactaagaatctcaggaggtatttccaagacaaaaggtatgccagagtttttttgttattcctccctgatagtgaactataatagtttgtgctttaaaaataatccatattttcttttgagatattgctggttatggtgaagtagaacgtcaaaatggcagtcttagatataggaccgtctccattttataggaccagttggtattcaatttgaggtagttgctggatgtaattaactgtcaggcaatttaatttgaaattgtgtatttattgccaaaacataagtgtgtttaacttaaatataggaccatatccattttataaggaggtccctctcatttccattaaataaaccatgttacatagttcaaaagggagcagaaaacaaaccaacagattgcagataaaaccttcacatctagaaccagagacaactagttattcatatagaaccaaccagatacagagatttggctcaagccaccattggcaaaatgcaaggccatcatacaaatcgagtctcaatttcctagagttggcttaataatttggattcaatgtgaaccattcaaagccagaaaattagttttacgagttgtgatggagaaatcatctgtaaggtcttctactattctagtatctatctatctatatatataggagagagagagagagagagagggcccaaccactatttagtattgatgaatcttgaaagttccactatctaaggcatgtgtacctgaaaaatataacaaagatccaaataggttacagtgttacactatccagtgtaaaagagaaaaaacatcgtatgcaatgaaggacttttcacctatttgtttgcaattcgttttctgttttcccttttttaccgatgcaaaggaaaaggaggcgtatttactgctaattattctttttttttttttgggggggggggggggttgttcctagctaatcctatctgttaccacgtttccttttgtttactgaactgtttcttctaggtacattgtgatccttgatgacatatggactgtatcggcatgggagagcatcagatgtgcattgcctgacaacttaaagggtagcaggataatagtaaccacccggaatgcagatgtggccaacacgtgctgttctcgtccccaagatcggatttacaatatccagcgactatcagaaacgacatcacgagaactgttcttcaagaagatatttggttttgcagatgataaatcaccaactgatgagtttgaggaagtgtcaaattccgttttgaagaaatgtggaggcttgccattagcaatagtgaacatcggcagccttctcgcaagcaagacaaataggaccaaggaggagtggcagaaggtttgtaacaacttaggatctgaacttgaaaacaaccctaccctggaaggagtgaagcaagtcttaaccttgagctacaatgatctaccctatcatctgaaggcctgcttcttgtatctaagtattttccctgaaaattatgtgatcaagaggggacccttggtgagaaggtggatagctgaaggtttcgtcagccaaaggcatggacaaagcatggaacagcttgcagaaagttactttgatgagtttgtggctagaagcattgtgcagcctgtgaggactgattggactggcaaggtgaggagctgcagagttcatgatttgatgttagatgtcattgtctccaggtcaattgaggagaactttgcatcattcttatgtgacaatgggagtacattggcttcccatgacaaaatccgtcgcctctccatccacagcagttacaattcgtctcaaaaaacaagtgccaatgtatctcatgctcgctccttcacgatgtctgcttctgttgaggaagtcccattcttctttccgcagctacggttattaagagtacttgacttgcaaggctgcagctgcttgagtaacgaaactttgcattgtatgtgcaggtttttccagctgaagtacctaagcctcagaaataccaacgtgtccaaattacctcatcttctagggaatctgaaacacctagagacgctggacattagggcaactcttatcaagaagctaccagctagtgcaggcaacctgagttgtctcaagcatttgtttgcggggcacaaggtacagcttacaaggacagccagtgtgaagttcttgagacaatcttcaggtttggaggtggcgactggggtggtcaagaacatggtggctctgcaatcacttgtccatatagtagtcaaggataaatcgccagtactgcgggaaattggcctgctgcaaaatctgacaaagctcaatgttctcttgcgcggtgtggaagagaactggaacgcattccttgagtctctgagcaagttgcctggccctcttcgctctctctccatccacactctggatgagaaggagcacagcttatcactggataatctagcctttgttgagtcgcctcctctattcataaccaagtttagcctggccggtgagttggaaaggctacctccatggataccatcgcttcgaaacgtatccaggtttgctcttcgtcgcaccgaactccatgctgatgccataggagttcttggggacctgccaaatctgctctgcctcaagctctatcacaaatcatatgctgacaactgcatagttttttgtcacggtaaattcgtgaagctcaagctgttgatcattgataatctggagaggatagagaagatgcagttcgatgcgggttcagtgactaatctggagaggctgacattgtcattcctgcgagaacccaagtatgggatttcaggtctggagaatctaccaaagctgaaggagatcgagttctttggcgacatcatattatctgtggtgaccaaagtggcatcatgcgtgaaggcgcatcctaaccacccaagagtcataggtgacaaatggaatattgtaacggagtatgcgtaaggagcaatatctgaagtctgaaaaacaacactgactagaagcctgtttggtttcttttgtcttctttttcttctttgttttttttcttttttcttttgagatgaggtagatgctggctgggcatgcctgtatctgcatttcggtagtactctgcgttgtttgttgcattcataagagtattatttagcagctagtgctac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0158300, RefSeq:Os06g0158300