BGIOSGA025923

From RiceWiki
Revision as of 16:59, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA025923

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025923, complete gene.

LocusTag

OsI_26428

Ensembl Transcript ID

BGIOSGA025923-TA

Ensembl Protein ID

BGIOSGA025923-PA

Length

2757

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20039110..20041866

Sequence Coding Region

20039110..20040120,20040212..20040940,20041228..20041866

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20039110..20041866 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20039110..20041866 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCACCGCGGCTTCCACGATGTCCGCAGCGGCGGCAGTGACTCGCCGGATCAACGCTGCCCTCCGCGTGGACGCCACCAGCGGTGACGTCGCGGCCGGCGCCGACGGGCAGAACGGGCGCCGGTCGCCCGTGGCCAAGCGGGTGAACGACGGCGGTGGCGGCAAGGATGACGTGTGGGTGGCCGTCGACGAAAAGGACGTGTGCGGGGCCCGCGGCGGCGATGGCGCCGCCCGGCCGCCGCTGTTCCGGACGTACAAGGTCAAGGGCAGCATCCTTCATCCTTACAGGTTCCTGATCCTTCTTCGACTGATCGCCATCGTCGCCTTCTTCGCGTGGCGCGTACGTCACAAGAACCGCGACGGCGCGTGGCTGTGGACAATGTCCATGGTCGGCGACGTCTGGTTCGGCTTCTCGTGGGTGCTCAACCAGCTACCGAAGCTGAGCCCCATCAAGCGCGTCCCGGACATCGCCGCCCTCGCCGACCGGCACTCCGGCGACCTACCCGGCGTCGACGTCTTCGTCACCACCGTCGACCCTGTCGACGAGCCGATACTCTACACCGTGAACACCATCCTCTCCATCCTCGCCGCCGACTACCCGGTGGACAGGTACGCTTGCTACCTCTCCGACGACGGCGGGACGCTGGTCCACTACGAGGCTATGGTGGAGGTCGCCAAGTTCGCCGAGCTGTGGGTGCCCTTCTGCCGGAAGCACTGCGTCGAGCCGAGGTCGCCGGAGAACTACTTCGCGATGAAGACGCAGGCGTACAAAGGCGGCGTCCCCGGCGAGCTGATGAGCGATCACCGGCGTGTGCGGCGAGAGTACGAGGAGTTCAAGGTCAGGATCGACTCCCTCTCGAGCACCATTCGCCAGCGATCTGATGTGTACAACGCCAAACATGCCGGCGAAAATGCGACATGGATGGCTGATGGCACACATTGGCCCGGCACATGGTTTGAGCCGGCTGACAACCACCAGAGAGGGAAACATGCTGGAATTGTTCAGGTTTTACTGAACCATCCAAGCTGTAAACCGAGGCTTGGATTGGCGGCGAGTGCTGAGAATCCGGTTGATTTCAGCGGTGTCGACGTGCGGCTCCCCATGCTGGTGTACATCTCGCGCGAGAAGAGGCCCGGATACAACCACCAGAAGAAGGCCGGCGCCATGAACGTGATGCTCCGCGTGTCCGCGCTGCTGTCGAACGCGCCGTTCGTCATCAACTTCGACGGCGACCACTACGTCAACTACTCGCAGGCGTTCAGGGCGCCGATGTGCTTCATGCTCGACGGCCGCGGCCGCGGCGGCGAGAACACGGCGTTCGTCCAGTTCCCGCAGCGGTTCGACGACGTTGACCCGACGGACCGGTACGCGAACCATAACCGCGTCTTCTTCGACGGCACCATGCTCTCCCTCAACGGCCTCCAGGGGCCCTCCTACCTAGGCACCGGCACCATGTTCCGCCGCGTCGCGCTCTACGGCGTGGAGCCGCCGCGCTGGGGAGCGGCGGCGAGCCAGATCAAGGCTATGGACATCGCCAACAAGTTCGGCAGCTCGACGTCGTTCGTCGGCACGATGCTGGACGGCGCCAACCAAGAACGGTCGATCACGCCGCTGGCGGTGCTCGACGAGTCGGTCGCCGGCGACCTCGCCGCCCTGACGGCGTGCGCGTATGAGGACGGGACGTCATGGGGGAGAGACGTCGGGTGGGTGTACAACATCGCGACGGAGGACGTGTACTACATCCAGCGGCCGTTCGGAGAGTACCTCCTCTACCTCGTCGCCGTCATCGCCATGATCCACGTGATCGGCATGTTCGAGGTGAAGTGGGCTGGCATCACGCTGCTGGACTGGTGCCGCAACGAGCAGTTCTACATGATCGGATCCACGGGGGTGTACCCGACGGCGGTGCTGTACATGGCGCTCAAGCTCGTCACCGGGAAGGGCATCTACTTCCGGCTCACGTCGAAGCAGACAACGGCCAGCTCCGGCGACAAGTTCGCCGACCTGTACACCGTGCGGTGGGTGCCGCTGCTGATACCGACCATCGTCATCATGGTCGTGAACGTCGCCGCCGTCGGGGTGGCGGTCGGCAAGGCGGCGGCGTGGGGGCCGCTCACCGAGCCGGGGTGGCTCGCCGTGCTCGGGATGGTGTTCAACGTGTGGATCCTGGTGCTCCTCTACCCGTTCGCGCTCGGGGTCATGGGTCAATGGGGGAAGCGGCCGGCCGTGCTGTTCGTGGCGATGGCGATGGCCGTCGCCGCCGTGGCGGCCATGTACGTCGCCTTCGGTGCACCGTACCAAGCTGAGTTGTCAGGTGTTGCTGCTTCTCTCGGTAAAGCGGCGGCGGCATCGCTGACTGGGCCATCTGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAATAASTMSAAAAVTRRINAALRVDATSGDVAAGADGQNGRRSPVAKRVNDGGGGKDDVWVAVDEKDVCGARGGDGAARPPLFRTYKVKGSILHPYRFLILLRLIAIVAFFAWRVRHKNRDGAWLWTMSMVGDVWFGFSWVLNQLPKLSPIKRVPDIAALADRHSGDLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRIDSLSSTIRQRSDVYNAKHAGENATWMADGTHWPGTWFEPADNHQRGKHAGIVQVLLNHPSCKPRLGLAASAENPVDFSGVDVRLPMLVYISREKRPGYNHQKKAGAMNVMLRVSALLSNAPFVINFDGDHYVNYSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKAAAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVAFGAPYQAELSGVAASLGKAAAASLTGPSG</aaseq>

Gene Sequence

<dnaseqindica>1..1011#1103..1831#2119..2757#ATGGCGGCCACCGCGGCTTCCACGATGTCCGCAGCGGCGGCAGTGACTCGCCGGATCAACGCTGCCCTCCGCGTGGACGCCACCAGCGGTGACGTCGCGGCCGGCGCCGACGGGCAGAACGGGCGCCGGTCGCCCGTGGCCAAGCGGGTGAACGACGGCGGTGGCGGCAAGGATGACGTGTGGGTGGCCGTCGACGAAAAGGACGTGTGCGGGGCCCGCGGCGGCGATGGCGCCGCCCGGCCGCCGCTGTTCCGGACGTACAAGGTCAAGGGCAGCATCCTTCATCCTTACAGGTTCCTGATCCTTCTTCGACTGATCGCCATCGTCGCCTTCTTCGCGTGGCGCGTACGTCACAAGAACCGCGACGGCGCGTGGCTGTGGACAATGTCCATGGTCGGCGACGTCTGGTTCGGCTTCTCGTGGGTGCTCAACCAGCTACCGAAGCTGAGCCCCATCAAGCGCGTCCCGGACATCGCCGCCCTCGCCGACCGGCACTCCGGCGACCTACCCGGCGTCGACGTCTTCGTCACCACCGTCGACCCTGTCGACGAGCCGATACTCTACACCGTGAACACCATCCTCTCCATCCTCGCCGCCGACTACCCGGTGGACAGGTACGCTTGCTACCTCTCCGACGACGGCGGGACGCTGGTCCACTACGAGGCTATGGTGGAGGTCGCCAAGTTCGCCGAGCTGTGGGTGCCCTTCTGCCGGAAGCACTGCGTCGAGCCGAGGTCGCCGGAGAACTACTTCGCGATGAAGACGCAGGCGTACAAAGGCGGCGTCCCCGGCGAGCTGATGAGCGATCACCGGCGTGTGCGGCGAGAGTACGAGGAGTTCAAGGTCAGGATCGACTCCCTCTCGAGCACCATTCGCCAGCGATCTGATGTGTACAACGCCAAACATGCCGGCGAAAATGCGACATGGATGGCTGATGGCACACATTGGCCCGGCACATGGTTTGAGCCGGCTGACAACCACCAGAGAGGGAAACATGCTGGAATTGTTCAGGTATTTGCGCACTACACATGTTTAATTTCTGTTTCCAATCTTGTCCGGGCAAATTGTATCAGAGTGAATGGTTTTTGTGTGTTTTTGATAGGTTTTACTGAACCATCCAAGCTGTAAACCGAGGCTTGGATTGGCGGCGAGTGCTGAGAATCCGGTTGATTTCAGCGGTGTCGACGTGCGGCTCCCCATGCTGGTGTACATCTCGCGCGAGAAGAGGCCCGGATACAACCACCAGAAGAAGGCCGGCGCCATGAACGTGATGCTCCGCGTGTCCGCGCTGCTGTCGAACGCGCCGTTCGTCATCAACTTCGACGGCGACCACTACGTCAACTACTCGCAGGCGTTCAGGGCGCCGATGTGCTTCATGCTCGACGGCCGCGGCCGCGGCGGCGAGAACACGGCGTTCGTCCAGTTCCCGCAGCGGTTCGACGACGTTGACCCGACGGACCGGTACGCGAACCATAACCGCGTCTTCTTCGACGGCACCATGCTCTCCCTCAACGGCCTCCAGGGGCCCTCCTACCTAGGCACCGGCACCATGTTCCGCCGCGTCGCGCTCTACGGCGTGGAGCCGCCGCGCTGGGGAGCGGCGGCGAGCCAGATCAAGGCTATGGACATCGCCAACAAGTTCGGCAGCTCGACGTCGTTCGTCGGCACGATGCTGGACGGCGCCAACCAAGAACGGTCGATCACGCCGCTGGCGGTGCTCGACGAGTCGGTCGCCGGCGACCTCGCCGCCCTGACGGCGTGCGCGTATGAGGACGGGACGTCATGGGGGAGAGACGTCGGGTGGGTGTACAACATCGCGACGGAGGACGTGGTGACCGGGTTCCGCATGCACCGGCAGGGGTGGCGCTCCGTGTACGCCTCAGTGGAGCCCGCCGCGTTCCGCGGCACGGCGCCGATCAACCTCACCGAGCGCCTCTACCAGATCCTCCGGTGGTCGGGCGGCTCGCTGGAGATGTTCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCTCTTCCCGGTGATGTGGCTCATCTCCGAGCAGTACTACATCCAGCGGCCGTTCGGAGAGTACCTCCTCTACCTCGTCGCCGTCATCGCCATGATCCACGTGATCGGCATGTTCGAGGTGAAGTGGGCTGGCATCACGCTGCTGGACTGGTGCCGCAACGAGCAGTTCTACATGATCGGATCCACGGGGGTGTACCCGACGGCGGTGCTGTACATGGCGCTCAAGCTCGTCACCGGGAAGGGCATCTACTTCCGGCTCACGTCGAAGCAGACAACGGCCAGCTCCGGCGACAAGTTCGCCGACCTGTACACCGTGCGGTGGGTGCCGCTGCTGATACCGACCATCGTCATCATGGTCGTGAACGTCGCCGCCGTCGGGGTGGCGGTCGGCAAGGCGGCGGCGTGGGGGCCGCTCACCGAGCCGGGGTGGCTCGCCGTGCTCGGGATGGTGTTCAACGTGTGGATCCTGGTGCTCCTCTACCCGTTCGCGCTCGGGGTCATGGGTCAATGGGGGAAGCGGCCGGCCGTGCTGTTCGTGGCGATGGCGATGGCCGTCGCCGCCGTGGCGGCCATGTACGTCGCCTTCGGTGCACCGTACCAAGCTGAGTTGTCAGGTGTTGCTGCTTCTCTCGGTAAAGCGGCGGCGGCATCGCTGACTGGGCCATCTGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025923