Os06g0160400

From RiceWiki
Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0160400| Description = Conserved hypothetical protein| Version = NM_001063414.1 GI:115466559 GeneID:4340205| Length = 3600 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0160400

Description

Conserved hypothetical protein

Version

NM_001063414.1 GI:115466559 GeneID:4340205

Length

3600 bp

Definition

Oryza sativa Japonica Group Os06g0160400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3059008..3062607

Sequence Coding Region

3059239..3059369,3059702..3059804,3060112..3060303,3061250..3061296,3062242..3062464

Expression

GEO Profiles:Os06g0160400

Genome Context

<gbrowseImage1> name=NC_008399:3059008..3062607 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3059008..3062607 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactacgactaccggggcaggccgggctccggatcctacggcggcggcgtcggcggcggcggggggtcgtcgtccctctacccgcgcgtcggccagccctcccacggcgtcgccaacgcgcccccgccggagccgccgcgggccgcgccgtaccaccaccatggcccccccaccgtctccgcggctccgcaccccgtccccgcctcgtcctccacatcgatgggcatacaagttgtgataaagccagcatatcggataacccctcctcctcagttgccgccacagcttacagaaattcctcgcagtaccttcaattttgattttgagtatgaaaggaaaattcttgctgaggctgagaaggagaaccccaactggagcaagtttgtgatagagagtcagccaccaccaccaccacagccgccaagaggcccaaaactcacaactcccactacttctgtggctactccaggggatccagttgtggacaagtatatatccatggggcttggacgtgaagctgtctcatttgctgtgttgaactatggagataatccagcgaaggtgaaggagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaaatgttcccgaactgctggccatccacgacaacgaccctgacaaagttatccagcacctgatcggcacatcatag</cdnaseq>

Protein Sequence

<aaseq>MDYDYRGRPGSGSYGGGVGGGGGSSSLYPRVGQPSHGVANAPPP EPPRAAPYHHHGPPTVSAAPHPVPASSSTSMGIQVVIKPAYRITPPPQLPPQLTEIPR STFNFDFEYERKILAEAEKENPNWSKFVIESQPPPPPQPPRGPKLTTPTTSVATPGDP VVDKYISMGLGREAVSFAVLNYGDNPAKVKEFVKSYNALHEMGFTSSNVPELLAIHDN DPDKVIQHLIGTS</aaseq>

Gene Sequence

<dnaseqindica>3239..3369#2804..2906#2305..2496#1312..1358#144..366#cctctccgctccaattctcccccacccgcaaccgcgtcctcctccatccttcccggcgaagcgatccaccggcggcgaggcgcgtcagctctcacccgaggagctcagccccaccggcgcgggcgcgcgcgcgcgcggcgaggatggactacgactaccggggcaggccgggctccggatcctacggcggcggcgtcggcggcggcggggggtcgtcgtccctctacccgcgcgtcggccagccctcccacggcgtcgccaacgcgcccccgccggagccgccgcgggccgcgccgtaccaccaccatggcccccccaccgtctccgcggctccgcaccccgtccccgcctcgtcctccacatcgagtaaatccctccctccccgctctgtgcatactgaatctctgcatagtgaatcgctgggtagcgcagaagagagaactgcgtgtcatgtttactcgatcgaattgtgaacagcttattctacctgattggattgcgtgctagattggcagatctcatgttgtaatccggttggaggggtatcgtgatcccgagcgatttatccctgaaactgagctagtttggttttgagttgtgcattgaacttctactaccatttggtttctaggtggcttgtcagacctaccaagcttgttcatgcagtaaattgcctcgatttaatcatttgcacatcggtgtgattagttagttcaccatgctatgcttcctagctagcaatgaaaaaggggacgtaccgggcacttgtatcagcaacaacaacagaattagattaaaccttgtctttggataagggaacgagctctactactgtttatatgttctagttgacctcagtataggcctaaacatggtctcgttatgtacaaaattgagttctcaaaagtaacagctttgtttagttgaaaatgctgtactttctatattttaaagtgtgcgagaaaatctggcttttgcatgtgtgcgttttttcactagccaaagacaaataaatgcaacagcatagggttctttctgcacctttgctaatgaaacattgactgtgggagtgaaaacattgaagtgtttgttttaatggtgttttcaacatagccgaagttggtaaaattgtagaattccctgggcccatcgatataatttttttcccaaaagttatttgaagacaaaaatattggaacatccctgtttttactgttgatatcatgccagatttagaaactgccctgtagcgtttccttttttgccaattatcaagagcatgttattcatcattaattgttgttgctgcagtgggcatacaagttgtgataaagccagcatatcggataacccctcctgtaagtcactaagtttgttattcagtcatcactttgctgtattcacctacatgagaattgttcatctgctttggtaccaaattttctattttaatgcctgcaggatgtttggtataaattccctttatgtttagttaagattggtaattcaattggagtaacttggtgtttatttagcaaacagccaaacactgttctttcagattcaaattgatgccttctaacttttgtgtattgaaagcagacataaatcatagcgtcatgatagttttgaactgctgaaattatcctcctttggcttttgaaaaggaacgaagatattatgttgcagtgtaacaggagatatggttgtttataaactgtctctctgtatattggtttgtgcttctgtgcgtaaaattagagatgaggaaatagctccactacaaatattcacaaataatggacttctagtagcattagctcaggattcacctctagttattcaatctgcatggggctattatgttctgaacgctcacaaatcttaatggtctagttgtttcttgatggactattatgttgttagaagcccatcgtagaagatatagatagtgcagtttattccgtatagtagactttgtggatggattctgtttgttcttttcctttatttatttattcatttattggccattccattcttttactgtgaatatggtgttctagttggtagcttgcagacatgattcatactataatgggctccctcaaaacttgttccatgtactgcgcttgcctagctgttctttctagagacaaatggcatcatcttgcaaacttccatctattttgcatatttatgcatccttctttgttaaatgcatcaacgtttattatctacacttccctcgtatatttgatcattggccatcctctaatgtgtgctttgcttttattattgcagcctcagttgccgccacagcttacagaaattcctcgcagtaccttcaattttgattttgagtatgaaaggaaaattcttgctgaggctgagaaggagaaccccaactggagcaagtttgtgatagagagtcagccaccaccaccaccacagccgccaagaggcccaaaactcacaactcccactacttctgtggtaataatatctacataattcttgtcttccatatagtattgtgtattacacaaatagtgctaggtacttaacatcagggagcaggctgttgttgaaaaatcgataatccattgcaagggctaatatataaagttccttgggcaaatggggactaatacccctgatactcaagagatttttcgcttcttggcatcctttcacatgatagcaatatcagctgtttataacaagttaggtaccctaggaagttgtagagatgtaatgccatctccctagaaaacttatttttatttttgcccttctgcaggctactccaggggatccagttgtggacaagtatatatccatggggcttggacgtgaagctgtctcatttgctgtgttgaactatggagataatccagcgaaggcatgctttttcccttatttatcttgtgatttatcattaccttctttcaacatatcatcaagaacaaaaaccattgctttgataactcaaaaaggttttcaaaggtcaacaagatagctatatacaatcagtatttgcagaagcactagggtttcttcttctagcaaaacagtgattgccattctgtccagttggtagtttttgtggaattcgattttctacttctcagggagatagaagtgtcttctgccattctaatcgccacgagcatttgtagacagtggaaaaaaaagagagagaaactgacaaggatgaatcctatgtacttgcaggtgaaggagtttgtgaaatcctacaacgctctccacgagatgggcttcacatcctcaaatgttcccgaactgctggccatccacgacaacgaccctgacaaagttatccagcacctgatcggcacatcatagtccagaacaaaactctccacatattcccccatgtataggtccatcttacgctggcaagcgccatacatgtcgcgtttttaatgatggtttcgagtgctagctattgtacgcgtatttccgctacgagtttcatgaactgactattgttgtgcttcccaagcggtttcataaacttaaccttgctttttgtgtcggatatatagagccagtaggtgatgattctgattgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0160400, RefSeq:Os06g0160400