BGIOSGA026004
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA026004 |
|---|---|
| Description |
Succinyl-coa ligase alpha-chain 2 |
| Definition |
Oryza sativa Indica Group BGIOSGA026004, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA026004-TA |
| Ensembl Protein ID |
BGIOSGA026004-PA |
| Length |
4943 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:21451226..21456168 |
| Sequence Coding Region |
21451226..21451735,21453413..21453622,21454054..21454224,21454302..21454425,21454912..21454973 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome07:21451226..21456168 source=RiceIndica07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome07:21451226..21456168 source=RiceIndica07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGCTCGTCTCCGCCTCCTCCTCCACCACCGCCGTCGCGGCGCTCCCCGGCGCCGCCAGGGCCTCCTCCTTCCTCGGCGGCGCCGGCAGGAGCGGCAGGCTGCTGCTGAGGCAGGCCGAGTCGTCGTCCGCGCGGGCGTCGTTCGCCGTGCGCGCCGCGGCGCCCGACAGGCCAATCTGGTTCCCCGGCAGCACCCCGCCGCCGTGGCTCGACGGCAGCCTCCCCGGCGACTTCGGCTTCGACCCCCTGGGTCTCGGATCGGACCCGGAGAGTTTGCGGTGGAACGTGCAGGCGGAGCTGGTGCACTGCCGGTGGGCGATGCTGGGCGCGGCGGGCATCTTCATCCCGGAGTTCCTGACCAAGATCGGCATCCTCAACACGCCGTCGTGGTACACCGCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTAGGTGGGGTTACCCCTAAGAAAGGTGGAACCGAGCACCTAGGCCTTCCGGTGTTCAACTCTGTGGCAGAAGCTAAGGCTGAGACAAAGGCGAATGCATCTGTTATATATGTTCCACCACCATTTGCTGCTGCTGCAATAATGGAAGCGATGGAGGCCGAACTTGACCTTGTTGTCTGCATTACCGAAGGGATACCTCAGCATGACATGGTGAAAGTGAAGGCTGCTCTGAACAAGCAATCAAAAACTCGGTTGATTGGACCAAATTGCCCTGGTATCATTAAGCCGGGTGAATGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCAGGTCGTGTTGGGATAGTATCTCGCTCTGGTACCTTGACATATGAAGCGGTGTTTCAAACAACAGCCGTAGGCTTGGGGCAGTCAACGTGTGTTGGCATTGGTGGTGATCCCTTCAATGGCACGAATTTTGTTGATTGCCTTGAAAAGTTTGTTGATGATCCTCAGACAGAAGGTATTGTTCTCATCGGAGAAATTGGAGGTACTGCTGAGGAGGATGCTGCAGCCTTCATTCAGGAGAGCAAAACACAAAAGCCTGTTGTTGCATTCATAGCTGGACTCACTGCTCCACCTGGGCGTCGCATGGGTCATGCTGGAGCAATTGTGTCAGGGGGCAAGGGTACGGCACAAGACAAAATCAAGGCTCTCAGAGAGGCTGGGGTTACTGTTGTTGAGTCACCAGCGAAGATTGGTTCAACTATGTTCGAAATTTTCAAGCAACGCGGAATGTTAGAATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MALVSASSSTTAVAALPGAARASSFLGGAGRSGRLLLRQAESSSARASFAVRAAAPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQQYFTDTTTLFIIELILIGWAEGRRWADIIKPGCVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGGTAEEDAAAFIQESKTQKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKALREAGVTVVESPAKIGSTMFEIFKQRGMLE</aaseq> |
| Gene Sequence |
<dnaseqindica>1..510#2188..2397#2829..2999#3077..3200#3687..3748#4119..4200#4804..4943#ATGGCGCTCGTCTCCGCCTCCTCCTCCACCACCGCCGTCGCGGCGCTCCCCGGCGCCGCCAGGGCCTCCTCCTTCCTCGGCGGCGCCGGCAGGAGCGGCAGGCTGCTGCTGAGGCAGGCCGAGTCGTCGTCCGCGCGGGCGTCGTTCGCCGTGCGCGCCGCGGCGCCCGACAGGCCAATCTGGTTCCCCGGCAGCACCCCGCCGCCGTGGCTCGACGGCAGCCTCCCCGGCGACTTCGGCTTCGACCCCCTGGGTCTCGGATCGGACCCGGAGAGTTTGCGGTGGAACGTGCAGGCGGAGCTGGTGCACTGCCGGTGGGCGATGCTGGGCGCGGCGGGCATCTTCATCCCGGAGTTCCTGACCAAGATCGGCATCCTCAACACGCCGTCGTGGTACACCGCCGGCGAGCAGCAATACTTCACCGACACCACCACCCTCTTCATCATCGAGCTCATCCTCATCGGCTGGGCCGAGGGCCGCCGGTGGGCTGACATCATCAAGCCCGGCTGCGTCAACACCGACCCCATCTTCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGAGGGACTCATCCCCTTTTTCCTTCTTCAGCACTCTCTTCCTCCTCTTCCCCCCTTCCTCTATCCTTCTATCAACGGTGATCTAGTAGGGTAGGGTAACTTGGGTCCATAGACAAAGGCAGAGTATATTACGGGGTGCCAAGGAATCTGGTCATGAAACTTAGACTCCATATTAGCTTAAATTCGATCTAAAGTAGAGTAAATTAAGTAAGTGGTACTCATTTCATTTCGTTTTAGCTCCGCCCCCTGTTGAGTCCTCCCAACATCCATGTTGGATCCGCCCCTAGAGGTAGGAATGGAAATGGTCGGAAACAATATTATTTTTTATTATTTTTATGGAAATGGTATCGTTGGAATTTTTTCTATATTTATGAATTTAAGTAATGGCAACTTTAATATGATGAAGATGAAAAGCTAAATTTTATAGAAAAAAAGTAAGAAATGATACCAATTTTTTTTACAAAAATAGGATTGGCATGGTCGAAAAATTTCCACATTATTTTCATCGCTAGGAGATACCTATGACTTTACCACCAAATCATTAGAAGGAAAAAAAAAGAAATATCGTGAATTACATGTCAGGTTAGGTGTAATTTGATCCAACGAATTACAAGAAGATTGAAAAACCTCAAACTTCTTGGTAGGTCATACATTGACAACCCCATGGAATGATGGAAAGGCATTATATCGAGACTTTGGAATATGACAACTCATATCTGGGTAGGAATAATAAATTTGAAGGAAAATGAAGTAGAGGGACTAAGGGAGAGAGGAAGATTCCTTTTCTTTTTGGTCTTTGTGAGGGAGGAATCATCCTTGTATGGTCTTTACAATTGACTTCCATGTCTCTCATATACTGCCCCCGTTTCAAAATGTTTGACACCGTTGACTTTTTAGTACGTGTTTGACCATTCATCTTATTCAAAAAATTTAAGTAATTATTTATTCTTTTCATATCATTTGATTTATTGTTAAATATACTTTCATGTACACATATAGTTTTACATATTTCACAAATTTTTTTAATAAGACGAACGGTTAAACATGTGCTAAAAAGTCAACGATGTCAAACATTTTGAAACGGAGGGAGTATATTCCTTATTATTTTCCAATGAGAAAAAAATACAATAACAATCAGAAAAAGCATAATTTGGAGTTCTATATTTTTATCATCACGATAATAGCGACAAATACAAGGGTCTAGGTGGAAAGTTTGACCACCCAACTTCCCCTGCAAGAATGGATCGCGAGGAGACCCCAGAAAAGTAAACAAAAACGGAGGAGGAGCGCACTCGCCCAAAAACCCCAAACGAAATCGAATCGAGAGGAGAAAAGGGGCACGCGCCGCCGCCGCCGCCCGCCGCTGCCACCACCAGCCACCCACCATGGCCGCCTCCGCCCGCCGCGCGTCCCAGCTGCTGGGATCCGCGGCCTCCCGCCTCCTCCACGCGCGGGGCTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTATGGAAACAAAAGTAATTTGACTGATTAGCTGTCGTGTACTTTTTTTACCCTATTTAATTGAAGTACTTCTCACAATAACAGGTAGGTGGGGTTACCCCTAAGAAAGGTGGAACCGAGCACCTAGGCCTTCCGGTGTTCAACTCTGTGGCAGAAGCTAAGGCTGAGACAAAGGCGAATGCATCTGTTATATATGTTCCACCACCATTTGCTGCTGCTGCAATAATGGAAGCGATGGAGGCCGAACTTGACCTTGTTGTCTGCATTACCGAAGGGATACCTCAGCATGACATGGTAATTTACAACAATTTCAGCATGCCATTAATATGATGTTTCTTTCCGTGCATGATGATTCCCAAATGTTTTCTCTTCATCATAATTGTACACAGAAGCTAGAAAAAAAATTAGTGAGACCATTGGAAATAACATACATGATTATTTTCATTTTATTCAAGTGGCTGTACACACGACACATATAAATAAGAGATTTTAGCTGTCATTAGTTTCAGCATGACCACCGATCAGTTCAATTGCAGTGGTGTCAATAATCTTTTGAGCTGGTAATCTGTTTTTCCTTAAAACAGTGTTATCAATCATGCTGTTTCATAGTTGGTCGTTCTTTACTCTTTCCTATATTTTAGATTATCTCAGTTCTATTTTTACTTGCCTTTTGTCAAAGGAAATTAATGAGGTGACCCATTTAAATGTTTCTTTGTAACTTTCAGGTGAAAGTGAAGGCTGCTCTGAACAAGCAATCAAAAACTCGGTTGATTGGACCAAATTGCCCTGGTATCATTAAGCCGGGTGAATGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCAGGTCGTGTTGGGATAGTATCTCGCTCTGGTACCTTGACATATGAAGCGGTATGCACATCAATTTTAGTGTGGCTAACAATCTGTGAATACATTTGCCTAAGGTGTATTTCTTTCTTCACTGGCAGGTGTTTCAAACAACAGCCGTAGGCTTGGGGCAGTCAACGTGTGTTGGCATTGGTGGTGATCCCTTCAATGGCACGAATTTTGTTGATTGCCTTGAAAAGTTTGTTGATGATCCTCAGACAGAAGGTACGCTGTCTGTGACTGGCTGACTGAGGTTGCACAATATTAATTCAAATTGTCCTTAGTTTGCTATGTTCTGCTTTACCTCTAGCCTCTCAGTTAGATCTGCATGTTTAGTTTTAAGTTCAATATTCTACTTGCTTTTGTATTTGACAATAATTTATTGGACAGGCTTAATCTTGATTTTCATTGTATACCATCAGTTACCCTGTATATGCCAACCTAGTGATTTTTCACAATTGTTTGCTCTGACTTAGTTGAATTTATCAGGATAAGCAAAATGGATTGTATATGGAAAACAGAGCTCCTGCTTTTTACAATTTTCTTTATCTTGACTTTGTATTTCTTTATCATTAATCCCACATATTAATTAGTTAAGGGACTGAGGTTTCTAACAATTGTTTACTAGAGTCACGGAGTTAGGCAGTATCATTACTACTAGGTGGGTGACAGAATGAATATCATTGGTAACTGTTTCCCTGTGCCTATTAGGTATTGTTCTCATCGGAGAAATTGGAGGTACTGCTGAGGAGGATGCTGCAGCCTTCATTCAGGTTTGTTTGTTGGGAATCAGGATTTCGGCTATCAATAGTAATTTGGATAACCTCTTATGTACATGTCCTATTAACCTTTGTCACTATTAAAGTTATTCACAATAGTTCGGTTTCAACTTTCAATAAACTCAAGCGGTCTTGCTGTCTTATGATAAATGCAACAAATTCAGTTTTCAACTTTTTGTTATGATATGAAATGACTCGAGGACTGTACATGTCCAGGTACTAAAGTGACAGATGAAGTCAATCATTGCTAATACTATTGTGTGTGTCCAGTTGCATGATTGCTGAAAGTTACATTTTTATGTGTTTTAATATTAGATGAGCAATAACATATCAACTTACTGAAGTTGACATGCAATTATTTCAGGAGAGCAAAACACAAAAGCCTGTTGTTGCATTCATAGCTGGACTCACTGCTCCACCTGGGCGTCGCATGGGTCATGCTGGAGGTATTCACTTAATAAGTTTTTTTTATTTGATTTTTCTTTTGCGATTCATGCTTTTCTGGATTATGCATATTCTTTTCTCCATTCAATCAATTGTACAATCTTGAGTTGAAACAAATGCTCCTGGGACTCTTACTGTCGCTAGACTACATTTTATGATTATTAGCAAATACTGATAAGTAAAGAAATACTAAAATTCCACAGATTTTACTATGAAAGATTCACTGGGTCGAATGTGGTATTGGTTCACGATCAGTAATATATGAGAAATGCATACTTCATTCTTCCAACCAGTATGGACATTTATACAGTTCGAAACCGGTGGTTTTGGACCAGATTTTTAGTTGCATCGGATTCTATCGTGCCTTAGCCTTCCATCTCCTATAACGTGGTTAACATTATGTATGACACCATGATCAAGTACTATGGTAGCGGTCAGCAAAGTTTGATTCCTACTCCTAAAACATGGTTAACATTATGTATGACAGGATATGAATCCCAATTTTTCCATAAAAAATGTTTGTTGATATACATTCTCTTTTGTCGTTTTAAATCAAGTTCAGCTATTGCATGTACTAATCTACTTTCACTCTTCTCTTATGGCAGCAATTGTGTCAGGGGGCAAGGGTACGGCACAAGACAAAATCAAGGCTCTCAGAGAGGCTGGGGTTACTGTTGTTGAGTCACCAGCGAAGATTGGTTCAACTATGTTCGAAATTTTCAAGCAACGCGGAATGTTAGAATAG</dnaseqindica> 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