Os06g0162500

From RiceWiki
Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0162500| Description = Similar to Naringenin 3-dioxygenase like protein| Version = NM_001063424.1 GI:115466579 GeneID:4340216| Length = 212...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0162500

Description

Similar to Naringenin 3-dioxygenase like protein

Version

NM_001063424.1 GI:115466579 GeneID:4340216

Length

2122 bp

Definition

Oryza sativa Japonica Group Os06g0162500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3144478..3146599

Sequence Coding Region

3144535..3145022,3145502..3145823,3146206..3146454

Expression

GEO Profiles:Os06g0162500

Genome Context

<gbrowseImage1> name=NC_008399:3144478..3146599 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3144478..3146599 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaaccgccgcggcggcgccgccgcgcgtgcaggccctagccgacgccggcgtctccttcctcccggcgcagtacgtccagccgccggaactccgcccggaccccaccaccaccacccaccgccgcgccccgaccgccgcctccctctccgtccccgtcgtcgacctctcatcgcccggtgcgggcgacgccgtccgccgcgcgtgcgccgagtggggcgccttccacgtggtcggccacggcgtccggccggggctgctcgacgcgatgcgtggggcggggctcgccttcttccgctcccccatggaggagaagctccggttcgcctgcgaccaggccaggggcgccgccgccgaggggtacggcagccggatgctcgccaacgacgactccgtgcttgactggcgcgactacttcgaccaccacaccctcccggattcccgccgcgatcccacccggtggcccgatttcgtccccggctacagggacactgttgtgaaatacagcgacagcatgaaagatctcgctcaaaaattgctgcgcattgtctctgaaagtctgaacttgccaccttcgtatatagaagaagcagtgggggaagtttatcagaatattactgttagctactattctccttgcccacaacctgatcttgctcttggattgcaatctcattctgatatgggtgcaataacacttctaatacaagatgatgtgggtgggcttgaagtactgaaggacgggctgtggatacctgttccttctttgcctgatggaatccttgtaattttggctgaccagacagagatcataaccaatggaagatacaagagtgctgtgcatcgagctattgtcaatgctgatcgtgcccgcttgtcagtagcaacattctacgatccatccaaatctcgaaaaatttgtactgctccacagctcgtttgcaaggagcatccacagaagtaccgggatgtgatatatggtgactatgtctcatcttggtatagcaaaggcccagagggcaagcgcaacattgatgccctcctgatcgagcaatag</cdnaseq>

Protein Sequence

<aaseq>METAAAAPPRVQALADAGVSFLPAQYVQPPELRPDPTTTTHRRA PTAASLSVPVVDLSSPGAGDAVRRACAEWGAFHVVGHGVRPGLLDAMRGAGLAFFRSP MEEKLRFACDQARGAAAEGYGSRMLANDDSVLDWRDYFDHHTLPDSRRDPTRWPDFVP GYRDTVVKYSDSMKDLAQKLLRIVSESLNLPPSYIEEAVGEVYQNITVSYYSPCPQPD LALGLQSHSDMGAITLLIQDDVGGLEVLKDGLWIPVPSLPDGILVILADQTEIITNGR YKSAVHRAIVNADRARLSVATFYDPSKSRKICTAPQLVCKEHPQKYRDVIYGDYVSSW YSKGPEGKRNIDALLIEQ</aaseq>

Gene Sequence

<dnaseqindica>58..545#1025..1346#1729..1977#gccacttgctccacccaacgcgcgagtctgtgtgccgccgccgccgccgccgctccgatggaaaccgccgcggcggcgccgccgcgcgtgcaggccctagccgacgccggcgtctccttcctcccggcgcagtacgtccagccgccggaactccgcccggaccccaccaccaccacccaccgccgcgccccgaccgccgcctccctctccgtccccgtcgtcgacctctcatcgcccggtgcgggcgacgccgtccgccgcgcgtgcgccgagtggggcgccttccacgtggtcggccacggcgtccggccggggctgctcgacgcgatgcgtggggcggggctcgccttcttccgctcccccatggaggagaagctccggttcgcctgcgaccaggccaggggcgccgccgccgaggggtacggcagccggatgctcgccaacgacgactccgtgcttgactggcgcgactacttcgaccaccacaccctcccggattcccgccgcgatcccacccggtggcccgatttcgtccccggctacaggtgattgcttgatcagttcatgccttgaataattgcaactggtacagatttttgcatgcttgaaatcattgagaaaaatgagagtcaatgttcagatatgataacaaatagaaagtgggcaaggaaaatttggtatcctacattttgggttgcctacttgcctctgttgttgattcggggttcatgttcaccgtggaggaatattatgtcatgcagatgatatgattatgagacttaattttgtactttcatttgaagcctgatagttctgcgcgtgtttgaaggatttttcggaatgctgtttgctgttgcattggcatcattgcatcatttctgtgtgtagtcattgcattgagaaaagaatgactcaaaaacatctagtgtcattgactcattgtacagtggacatatccatggaccatcacatattcgcatgagctgcggctttaacagataagctaataacttaatgttcgcagggacactgttgtgaaatacagcgacagcatgaaagatctcgctcaaaaattgctgcgcattgtctctgaaagtctgaacttgccaccttcgtatatagaagaagcagtgggggaagtttatcagaatattactgttagctactattctccttgcccacaacctgatcttgctcttggattgcaatctcattctgatatgggtgcaataacacttctaatacaagatgatgtgggtgggcttgaagtactgaaggacgggctgtggatacctgttccttctttgcctgatggaatccttgtaattttggctgaccagacagaggtaatattccttcacatgctttaatatatgctataccttctaatgctatctaatgtgtaatcaatatgctccaaactaccaaaatacattttgctactccagatgattttattcaagtattatttttatggtacaaattatctgttaggtaatttttgactctttaagtagtattaatctggcatttgcaattcattttagtttcattgcgaacttaagataagaatatggtcctgtgatacttgttcttgctactcatcctgcttgtattgtttcgaatagcttgtttactgttgtattccgagtagctgctaccaatgcgttctttccatataatttggctcctgcaatccaaatgctactaatgtttgcctttctctagatcataaccaatggaagatacaagagtgctgtgcatcgagctattgtcaatgctgatcgtgcccgcttgtcagtagcaacattctacgatccatccaaatctcgaaaaatttgtactgctccacagctcgtttgcaaggagcatccacagaagtaccgggatgtgatatatggtgactatgtctcatcttggtatagcaaaggcccagagggcaagcgcaacattgatgccctcctgatcgagcaatagaaccagaggcagcattatatagacagaatagagacattcatgcgtgttgtgatgctgtccaagattgccgatcttgattaataaagagaataacattgtaccatatgaatggttcctggtttttgaagtttctatgattcttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0162500, RefSeq:Os06g0162500