Os06g0165500

From RiceWiki
Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0165500| Description = Curculin-like (mannose-binding) lectin domain containing protein| Version = NM_001063443.1 GI:115466617 GeneID:434023...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0165500

Description

Curculin-like (mannose-binding) lectin domain containing protein

Version

NM_001063443.1 GI:115466617 GeneID:4340238

Length

2418 bp

Definition

Oryza sativa Japonica Group Os06g0165500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3304426..3306843

Sequence Coding Region

3304426..3306843

Expression

GEO Profiles:Os06g0165500

Genome Context

<gbrowseImage1> name=NC_008399:3304426..3306843 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3304426..3306843 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgagaggcgtacacattttcaccacattaatctccttccttctcatgctcaccactgctcttgcagaagataagaaaagctaccttgctagaggttcatctgtctccacagaggatgataccaagaccatcctagtgtcgcctaatggcgacttcgcctgtggcttctacaaggtggccaccaacgccttcaccttctccatctggttctccagatcgtcggagaagacggtggcgtggacggccaaacgtgatgctccggtgaacggcaagggctccaagctcaccttccggaaggacgggggcttggcccttgttgattacaacggcacggttgtatggagcaccaacaccacggccactggtgctagccgtgcagagcttcagaacagtggcaacctgatcgtcatggattcagaaggtcagtgcctctgggaaagcttcgactcgccaaccgacacacttctgccattgcagccgatgactcgagatacaaagctggtgtctgcatccgctagggggttaccctattcaggtttatacacctttttctttgacagtaacaatttgctgagtcttatatacaatggccctgagactagtagcatatattggcctaatcctgccttcttatcatgggacaatggtaggaccacttattacagtagccgacatggggttctagactctgatggttggttcatagctactgaccagctcaactttgaagcatctgatcatggtcagaaggatgtcatgaggaggttgacactggattatgatggaaaccttaggttgtatagtctaaacatgaccactggaaaatggtctgtcacttggatggcattctgtcaagtatgtgaaatacatggagtgtgtggtaaaaacagtttgtgcatttacaaaccagaccctcgctgttcttgtctcgaaggctttgagatggttaaaccaggtgactggagccaagggtgcagttacaaggcaaacgccacactcatttggaacaacaacgcaaacagcaagtctaaccacggattcatattcaagaagataccccacaccgacttctatggctatgacttgaactactccaagccagtgacactctggcagtgcaaaaggatgtgcttggacaatgctgattgtcaagcctttgaataccacaagggtatagggaaatgttttttgaaggccttgctttttaatggcaggaagtcccaagaccactataatgatttctatctaaaacttcccaaggcgacgccctattcacaattgttggcttccaaaccatcgcatgcttgcgtgatgactgaaaaagaagcctatccctcatcacaaatgctcacgggtaacaattccaatatcaagtttggttacttcctttcttcagcattgacattacttgtagttgaaatgactttaattacagttggatgttgggctgctaacaaatgggggagaagaccagagattcaagacgaaggttacaccataatttccagtcaattccgaaggttcaactacaaggagttggagaaggcaacagattgtttccaagaaatgctaggaagtggaggatcaggagcagtttacaaaggaatcctcgatgataaaaggaaggtcgctgtgaagaaactaaatgatgtgatccacggagaacaggagttcaggtcagagctaagtatcatagggagagtttatcatatgaatctggtcagaatttgggggttttgtgccgaaaagacaaacaaactcttggtttctgagtttgccgagaatggttctctagacagagtattatctgacaatctgggtttgtttcctgtgctacagtggagccaaaggtacaatatcgcacttggggtagcgaaaggattggcctatctccaccacgaatgtcttgagtggattgtgcattgtgatgtgaaaccagagaacatattgttagataaagattttgagccaaagattgctgattttggactggtgaaactagttagtcgaggatcaaacacagaaacccaatcaaaagtgcatgggactagagggtacattgcgccagaatgggctctaaatcttccgatcacaggcaaggctgatgtttacagctatggagtagtgcttcttgagttagtaaaagggaatcgggtttccagatgggtggttgatggtgaagaggaggtggaaatggctgttaagcgcaccgctgatgttctaaaagagaaattagctagcgaagatcaatcatggctgctggactttgttgactgcaggatgaatggagaattcaactattcacaggcagcaacagtgctaaaaattgcagtgtcatgtgtggaagaagataggcgcagaagaccgagcatgagcagtgtggttgaaatcctgctttctcttgtggaataa</cdnaseq>

Protein Sequence

<aaseq>MAMRGVHIFTTLISFLLMLTTALAEDKKSYLARGSSVSTEDDTK TILVSPNGDFACGFYKVATNAFTFSIWFSRSSEKTVAWTAKRDAPVNGKGSKLTFRKD GGLALVDYNGTVVWSTNTTATGASRAELQNSGNLIVMDSEGQCLWESFDSPTDTLLPL QPMTRDTKLVSASARGLPYSGLYTFFFDSNNLLSLIYNGPETSSIYWPNPAFLSWDNG RTTYYSSRHGVLDSDGWFIATDQLNFEASDHGQKDVMRRLTLDYDGNLRLYSLNMTTG KWSVTWMAFCQVCEIHGVCGKNSLCIYKPDPRCSCLEGFEMVKPGDWSQGCSYKANAT LIWNNNANSKSNHGFIFKKIPHTDFYGYDLNYSKPVTLWQCKRMCLDNADCQAFEYHK GIGKCFLKALLFNGRKSQDHYNDFYLKLPKATPYSQLLASKPSHACVMTEKEAYPSSQ MLTGNNSNIKFGYFLSSALTLLVVEMTLITVGCWAANKWGRRPEIQDEGYTIISSQFR RFNYKELEKATDCFQEMLGSGGSGAVYKGILDDKRKVAVKKLNDVIHGEQEFRSELSI IGRVYHMNLVRIWGFCAEKTNKLLVSEFAENGSLDRVLSDNLGLFPVLQWSQRYNIAL GVAKGLAYLHHECLEWIVHCDVKPENILLDKDFEPKIADFGLVKLVSRGSNTETQSKV HGTRGYIAPEWALNLPITGKADVYSYGVVLLELVKGNRVSRWVVDGEEEVEMAVKRTA DVLKEKLASEDQSWLLDFVDCRMNGEFNYSQAATVLKIAVSCVEEDRRRRPSMSSVVE ILLSLVE</aaseq>

Gene Sequence

<dnaseqindica>1..2418#atggccatgagaggcgtacacattttcaccacattaatctccttccttctcatgctcaccactgctcttgcagaagataagaaaagctaccttgctagaggttcatctgtctccacagaggatgataccaagaccatcctagtgtcgcctaatggcgacttcgcctgtggcttctacaaggtggccaccaacgccttcaccttctccatctggttctccagatcgtcggagaagacggtggcgtggacggccaaacgtgatgctccggtgaacggcaagggctccaagctcaccttccggaaggacgggggcttggcccttgttgattacaacggcacggttgtatggagcaccaacaccacggccactggtgctagccgtgcagagcttcagaacagtggcaacctgatcgtcatggattcagaaggtcagtgcctctgggaaagcttcgactcgccaaccgacacacttctgccattgcagccgatgactcgagatacaaagctggtgtctgcatccgctagggggttaccctattcaggtttatacacctttttctttgacagtaacaatttgctgagtcttatatacaatggccctgagactagtagcatatattggcctaatcctgccttcttatcatgggacaatggtaggaccacttattacagtagccgacatggggttctagactctgatggttggttcatagctactgaccagctcaactttgaagcatctgatcatggtcagaaggatgtcatgaggaggttgacactggattatgatggaaaccttaggttgtatagtctaaacatgaccactggaaaatggtctgtcacttggatggcattctgtcaagtatgtgaaatacatggagtgtgtggtaaaaacagtttgtgcatttacaaaccagaccctcgctgttcttgtctcgaaggctttgagatggttaaaccaggtgactggagccaagggtgcagttacaaggcaaacgccacactcatttggaacaacaacgcaaacagcaagtctaaccacggattcatattcaagaagataccccacaccgacttctatggctatgacttgaactactccaagccagtgacactctggcagtgcaaaaggatgtgcttggacaatgctgattgtcaagcctttgaataccacaagggtatagggaaatgttttttgaaggccttgctttttaatggcaggaagtcccaagaccactataatgatttctatctaaaacttcccaaggcgacgccctattcacaattgttggcttccaaaccatcgcatgcttgcgtgatgactgaaaaagaagcctatccctcatcacaaatgctcacgggtaacaattccaatatcaagtttggttacttcctttcttcagcattgacattacttgtagttgaaatgactttaattacagttggatgttgggctgctaacaaatgggggagaagaccagagattcaagacgaaggttacaccataatttccagtcaattccgaaggttcaactacaaggagttggagaaggcaacagattgtttccaagaaatgctaggaagtggaggatcaggagcagtttacaaaggaatcctcgatgataaaaggaaggtcgctgtgaagaaactaaatgatgtgatccacggagaacaggagttcaggtcagagctaagtatcatagggagagtttatcatatgaatctggtcagaatttgggggttttgtgccgaaaagacaaacaaactcttggtttctgagtttgccgagaatggttctctagacagagtattatctgacaatctgggtttgtttcctgtgctacagtggagccaaaggtacaatatcgcacttggggtagcgaaaggattggcctatctccaccacgaatgtcttgagtggattgtgcattgtgatgtgaaaccagagaacatattgttagataaagattttgagccaaagattgctgattttggactggtgaaactagttagtcgaggatcaaacacagaaacccaatcaaaagtgcatgggactagagggtacattgcgccagaatgggctctaaatcttccgatcacaggcaaggctgatgtttacagctatggagtagtgcttcttgagttagtaaaagggaatcgggtttccagatgggtggttgatggtgaagaggaggtggaaatggctgttaagcgcaccgctgatgttctaaaagagaaattagctagcgaagatcaatcatggctgctggactttgttgactgcaggatgaatggagaattcaactattcacaggcagcaacagtgctaaaaattgcagtgtcatgtgtggaagaagataggcgcagaagaccgagcatgagcagtgtggttgaaatcctgctttctcttgtggaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0165500, RefSeq:Os06g0165500