Os06g0166200

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Revision as of 09:05, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0166200| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001063448.1 GI:115466627 GeneID:4340243| Length = 295...")
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Gene Name

Os06g0166200

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001063448.1 GI:115466627 GeneID:4340243

Length

2957 bp

Definition

Oryza sativa Japonica Group Os06g0166200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3327558..3330514

Sequence Coding Region

3327597..3328829

Expression

GEO Profiles:Os06g0166200

Genome Context

<gbrowseImage1> name=NC_008399:3327558..3330514 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3327558..3330514 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcctcccctctccttcctccacctcgccgccaaccccacccccctccacgcctcgccgcttcgccgcgcccgcctccgccaccgcctctccctccgcacggaccacccgtcccggcgcgccgtggcgtcggcgtcggcgtcggcgggcgagaacccgtccaccccggggggtcctatagccgacgtcgagatggtccgtggcaaggacggcgtgtggacggcgcggccgccgacggtggtggtgctgtgggacctcgacaacaagcccccgcgcgggccgccgttcccggccgccaccgcgctccgcgacgcggcgtccctcctcggccgcgtcgtgtccgtctcggccttcgccaaccgccacgccttctcccacgtccccgcctgggtcgccgacgagcgccgggagcgccgcgccatggaccgcgccgagcgcgccggcgccgcgtccccgcccgtcccttactcctgcgccgtgtgcggccgccgcttccccacccgccccgacctcacccgccacttccgccagctccaccagcgcgagcgcaacaagaagctctcgcgcctccgctccctcaagggcaagaagcggcagaagttccgcgagcgcttcatctccgggaacaccaagtacgacgacgccgcgcgggagctcctcacccccaaggtcgggtacggcctcgccgccgagctccgccgcgccggcgtccacgtccgcaccgtctccgacaagccgcaggcggccgatcacgcgctcaagcgccaggtgaagcattccgtggcctgcggcgttgactggctcgtgctcgtctccgatgactccgatttcaccgacactgtgcggaaagcgcgcgccgccgacttgagaacggtcgtggttggcgatggttgccgtgctcttggaagtgtggctgacatttggttgccatgggaccgcgtcgagaatggggaggttgatgaggacatgctgcggaatgggacacatatgggattcagagatgaagaggaagatgagcaagatgatgatgagttcatagtggattgggatacgagtgatttggatggtgttgtcgatgacattgtcgcgacgaggaccaagttgttcggtgctacaacgatgtctgcatttgctgatgaggaaattatggatggcatattgggtgttgggataaatggcggtgacatgttatggagtagcgacgacgaggatgaggatggttatttttga</cdnaseq>

Protein Sequence

<aaseq>MPPPLSFLHLAANPTPLHASPLRRARLRHRLSLRTDHPSRRAVA SASASAGENPSTPGGPIADVEMVRGKDGVWTARPPTVVVLWDLDNKPPRGPPFPAATA LRDAASLLGRVVSVSAFANRHAFSHVPAWVADERRERRAMDRAERAGAASPPVPYSCA VCGRRFPTRPDLTRHFRQLHQRERNKKLSRLRSLKGKKRQKFRERFISGNTKYDDAAR ELLTPKVGYGLAAELRRAGVHVRTVSDKPQAADHALKRQVKHSVACGVDWLVLVSDDS DFTDTVRKARAADLRTVVVGDGCRALGSVADIWLPWDRVENGEVDEDMLRNGTHMGFR DEEEDEQDDDEFIVDWDTSDLDGVVDDIVATRTKLFGATTMSAFADEEIMDGILGVGI NGGDMLWSSDDEDEDGYF</aaseq>

Gene Sequence

<dnaseqindica>40..1272#aaccaaacaccttgtgggcgcgacctcgccgcgctcgccatgccgcctcccctctccttcctccacctcgccgccaaccccacccccctccacgcctcgccgcttcgccgcgcccgcctccgccaccgcctctccctccgcacggaccacccgtcccggcgcgccgtggcgtcggcgtcggcgtcggcgggcgagaacccgtccaccccggggggtcctatagccgacgtcgagatggtccgtggcaaggacggcgtgtggacggcgcggccgccgacggtggtggtgctgtgggacctcgacaacaagcccccgcgcgggccgccgttcccggccgccaccgcgctccgcgacgcggcgtccctcctcggccgcgtcgtgtccgtctcggccttcgccaaccgccacgccttctcccacgtccccgcctgggtcgccgacgagcgccgggagcgccgcgccatggaccgcgccgagcgcgccggcgccgcgtccccgcccgtcccttactcctgcgccgtgtgcggccgccgcttccccacccgccccgacctcacccgccacttccgccagctccaccagcgcgagcgcaacaagaagctctcgcgcctccgctccctcaagggcaagaagcggcagaagttccgcgagcgcttcatctccgggaacaccaagtacgacgacgccgcgcgggagctcctcacccccaaggtcgggtacggcctcgccgccgagctccgccgcgccggcgtccacgtccgcaccgtctccgacaagccgcaggcggccgatcacgcgctcaagcgccaggtgaagcattccgtggcctgcggcgttgactggctcgtgctcgtctccgatgactccgatttcaccgacactgtgcggaaagcgcgcgccgccgacttgagaacggtcgtggttggcgatggttgccgtgctcttggaagtgtggctgacatttggttgccatgggaccgcgtcgagaatggggaggttgatgaggacatgctgcggaatgggacacatatgggattcagagatgaagaggaagatgagcaagatgatgatgagttcatagtggattgggatacgagtgatttggatggtgttgtcgatgacattgtcgcgacgaggaccaagttgttcggtgctacaacgatgtctgcatttgctgatgaggaaattatggatggcatattgggtgttgggataaatggcggtgacatgttatggagtagcgacgacgaggatgaggatggttatttttgagattcatgtagattgacaggtaaacaattggaaatgcacatctcttttgttttctatgcatatatcatgatcatatagcaaactactatacattcaaaaacatgatggtgaacattaagcgtggttttcctcaattacagtgtgcttatggtttatttgtttggcaatttagctgaagttccaggctacttatctagtccttgcaaatggtacttgagacaatttattggctgacagatgaaagtaatgcacaagtggttgctgttagatctttccatttcacttaggagatagagtggggtttttttcagctatcaaagcggtcaagagtttcaaagtctctttcaattgagatggacacatgacaaattcttctggtcaatcgttgcaacatttgtgaggattctggtcgatggatggtcttggatatgaatgcccataccaaattcgaccaaccaacatatcttctcaagaaatggtagcttggtgtaacaccatgggagtggagcatgagatacacatgatttggaattaatcctggatgaaaagatgtaacttcaatgaacagacttaactttgatctagtttgcattgcaccaaaaaccactttgcataggttacgtgctatatgctcatggtctgcataatttcttcaatgcatcaatatttccaagaagtttcataattcatatatcggttgagaagcagtaatgcattgagaaatgcactgtaattctaaaaatcagagttttgttgataaaattgtactctcacttttctgcatgttagcagtcttctttattcccctagttcaccctacatgtttgcaatattagcgcaacttaagccttcaatacacactgaccaaagtagaacgaaatcggagaatactttaacataaatggactaaactagctcatgttatgtgacacctatctttctctgcttaataataaaatcatgagcttgcatgaaaaaaccttcacaataactagacaatgacttataaaaatggatttatagtgtgaaatgattgttcccaagataactgactagtattgtgaaccttacaaatctattaaaaccatgtgcaggattcatcatgcacatcttatgatgatactgtctgtgtttgtacagtacaaaaatacctgatctgcattattcaataaagatcatttattcatcttccattggcttttcaggacttgtgttgtactgctatcagcaaaccaaaaggcatcatcgcatcgacacaaacacagctgaaaaagaacggccatcttctaacatgcaggctgcaaattctgaataacatcatcctgttgggcacttgggctgtagctgaagctggagaaagaagctcatggtttgagagttggagaagctggctgcacatttcacatgagaatcgcgtccatttcaatcaggcacacaaggttaccttccagctgatttcgacgaagaaacaactgtatgagcatgtttgtcgcggcgaggaggtggcagccatccgagtacaagaaagtaattcctacctctcctgccggagaagctcagctaaaattgattagaaacacgagatgtcgggatagttcctggatggcattgctgaacatggatgcactgacatgcatatctcgactattagctgatgtattgagtagagtaaagtattacaccga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0166200, RefSeq:Os06g0166200