Os06g0167600

From RiceWiki
Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0167600| Description = Similar to Proteasome subunit alpha-3 (Fragment)| Version = NM_001063457.1 GI:115466645 GeneID:4340253| Length = 956...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0167600

Description

Similar to Proteasome subunit alpha-3 (Fragment)

Version

NM_001063457.1 GI:115466645 GeneID:4340253

Length

956 bp

Definition

Oryza sativa Japonica Group Os06g0167600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3419508..3420463

Sequence Coding Region

3419594..3420346

Expression

GEO Profiles:Os06g0167600

Genome Context

<gbrowseImage1> name=NC_008399:3419508..3420463 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3419508..3420463 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgccggtacgacagccgcacgacgatcttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggcgatcgggaacgccgggtcggccctcggcgtcctggcggccgacggcgtggtcctcgtcggcgagaagaaggtcacctccaagctcctccagacctcgcgctccgccgagaagatgtacaagatcgactcccacctcgcctgcgccgtcgccgggatcatgtccgacgccaacatcctcctcaacacggcgcgcctccacgcccagcgctacgccctctcctaccaggagcccatccccgtcgagcagctcgtccaatccctctgcgacaccaagcaggggtacacccagttcggcggcctccgccccttcggcgtctccttcctcttcgccggctgggacaagcaccatggcttccagctctacatgagcgatccctccggcaactacagcggctggaaggccgcggccgtcggggccaacagccaggcggcgcagtccatgctcaagcaggactaccgcgacggcctgacccgggaggaggccgtagccctcgccctcaaggtcctgagcaagaccatggattcgaccagcttgaccgccgagaagctggagctcgccgaggtgttcctgcagcccggcaccggggaagtgcagtaccaggtgtgctcccctgaggcgatggggaagctgctcgccaaggccggcctctcgcagccggcgcctgaggcttga</cdnaseq>

Protein Sequence

<aaseq>MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVV LVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQ EPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWK AAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQ PGTGEVQYQVCSPEAMGKLLAKAGLSQPAPEA</aaseq>

Gene Sequence

<dnaseqindica>87..839#gattcacacctctcccctcacttctcccccctcaaatccccaaatctaaccggagaaaaccccaatctctcgccgccgccgccgtgatgtctcgccggtacgacagccgcacgacgatcttctcgccggaggggcgtctctaccaggtggagtacgcgatggaggcgatcgggaacgccgggtcggccctcggcgtcctggcggccgacggcgtggtcctcgtcggcgagaagaaggtcacctccaagctcctccagacctcgcgctccgccgagaagatgtacaagatcgactcccacctcgcctgcgccgtcgccgggatcatgtccgacgccaacatcctcctcaacacggcgcgcctccacgcccagcgctacgccctctcctaccaggagcccatccccgtcgagcagctcgtccaatccctctgcgacaccaagcaggggtacacccagttcggcggcctccgccccttcggcgtctccttcctcttcgccggctgggacaagcaccatggcttccagctctacatgagcgatccctccggcaactacagcggctggaaggccgcggccgtcggggccaacagccaggcggcgcagtccatgctcaagcaggactaccgcgacggcctgacccgggaggaggccgtagccctcgccctcaaggtcctgagcaagaccatggattcgaccagcttgaccgccgagaagctggagctcgccgaggtgttcctgcagcccggcaccggggaagtgcagtaccaggtgtgctcccctgaggcgatggggaagctgctcgccaaggccggcctctcgcagccggcgcctgaggcttgatgtgctggtttgctgtgccttgtgatgcctgctgctcttagatggttttatcattattatgcttcttgttatctaaaccaaactatctgataatcatgtgttttaattttatgttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0167600, RefSeq:Os06g0167600