Os06g0168600

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0168600| Description = Similar to Ribonucleotide reductase| Version = NM_001063461.1 GI:115466653 GeneID:4340258| Length = 5047 bp| Defini...")
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Gene Name

Os06g0168600

Description

Similar to Ribonucleotide reductase

Version

NM_001063461.1 GI:115466653 GeneID:4340258

Length

5047 bp

Definition

Oryza sativa Japonica Group Os06g0168600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3448702..3453748

Sequence Coding Region

3449101..3449205,3449280..3449372,3449524..3449671,3449762..3449911,3449988..3450190
,3450328..3450447,3450539..3450703,3450793..3450879,3450960..3451109
,3451234..3451326,3451408..3451578,3452024..3452100,3452184..3452424
,3452504..3452767,3452922..3453009,3453108..3453169,3453263..3453490

Expression

GEO Profiles:Os06g0168600

Genome Context

<gbrowseImage1> name=NC_008399:3448702..3453748 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3448702..3453748 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatcacggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcgtcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagctcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctcgctcgcggcgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggagacgattaaggacatgtatggacatttcaacgagagatctgggctgaatgctcctttggttgcccacgatgtatatgaagtcatcatgaagaatgcttctcgcttggacagcgagataatttatgatagggacttcgattatgattattttggtttcaagactctggagaggtcttacctcctgaaacttggcgggaaggttgttgaaaggccgcaacacatgttaatgagagtttcagtaggtatacacaaggatgacattgagtctgctatcaagacctaccatctgatgtctcagcgctggtttactcatgcttcaccgacccttttcaatgctggcactccaaggccccaattaagcagctgtttccttatctgcatgaaagatgacagcattgagggaatctatgatactttgaaggaatgtgctgtcataagcaaatctgctggaggaattggtgtatcagttcacaatattcgagctactgggagctatatccgtggaacaaatggaacctccaatgggattgttcctatgctacgtgttttcaatgatactgcccgttatgttgatcaaggtggaggcaagagaaagggtgcatttgctgtgtacttggagccttggcatgcggatatttttgagttccttgatctgagaaagaatcatgggaaggaggagcatcgtgcaagggatcttttctatgcactctgggttcctgatctattcatgcaaagagtccaaaataaccaagaatggtcattgttttgtcccaatgaagctccagggttagctgattgctggggtgatgagtttgagaaactgtacacaaaatatgagagagagggcaaggcaaagaaaattgtcccagctcagaccctctggtttgacattttaaaggcacagatagaaactggtacaccatatatgctttacaaggatacatgcaataggaaaagtaaccagcagaatttgggcacaattaaatcttcaaacttatgcactgagataattgagtacacaagccctactgaaactgctgtctgcaatctggcatctattgctttaccacgttttgtaagggaaaagggtgtccccatagagtcccatccatctaaacttgtcgggagcagtgattctaaaaatagatattttgactttgacaagcttgctgaggttacttcaactgtcacatacaatctcaacaaaataattgatattaattattaccctgttgaaaccgcaaaaagatcaaatatgcggcacaggccaattggcattggtgttcaagggttggcagatactttcatattacttggcatgccatttgattcaccagaggctcagcaattgaataaggatatcttcgaaactatttactttcattctctgaaagcttccgctgagcttgctggtaaagaaggtccctatgaaacatatgaagggagccctgtcagcaagggcattctccaacctgatatgtggaatgtagttccatctgacagatggaactggccatctctacggagtactatttctaaagttggattaagaaactctcttcttgttgctccaatgcctactgcttccactagtcagattcttggcaacaatgaatgctttgaaccttatacatctaacatatacagccggcgggttctaagtggggagtttgttgtggttaacaagcatcttctccatgatttgactgaaatgggtgtttggactccagctctgaaaaataagataatttatgaagatggttctgttcaaaagatgacagtgatcccagatgatctaaaagcaatttacaaaacggtttgggagataaagcagaaaacgcttgttgacatggctgttgatcgtggatgctacattgatcagagccagagtcttaatgttcacatggaacaaccaaactttgggaagctgacttctctgcatttccatgcttggtccaagggcctgaaaactgggatgtattatctacgaacacgagcagctgctgacgcaatcaagttcacagttgatactgcccttttgaaggccaatggagaaaacggcaccaaggctgcagaggaagaggacgtggaagctaaaatggctcaaatggtttgttccttgaacaaccgggaggagtgcttggcgtgtggaagttag</cdnaseq>

Protein Sequence

<aaseq>MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVC AGVYKGVTTSQLDELAAETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMY GHFNERSGLNAPLVAHDVYEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLG GKVVERPQHMLMRVSVGIHKDDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSC FLICMKDDSIEGIYDTLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWV PDLFMQRVQNNQEWSLFCPNEAPGLADCWGDEFEKLYTKYEREGKAKKIVPAQTLWFD ILKAQIETGTPYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEYTSPTETAVCNLASIA LPRFVREKGVPIESHPSKLVGSSDSKNRYFDFDKLAEVTSTVTYNLNKIIDINYYPVE TAKRSNMRHRPIGIGVQGLADTFILLGMPFDSPEAQQLNKDIFETIYFHSLKASAELA GKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNWPSLRSTISKVGLRNSLLVAPMPTA STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGVWTPALKNKIIYED GSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNVHMEQPNFGKLT SLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANGENGTKAAEEEDVEAKMAQ MVCSLNNREECLACGS</aaseq>

Gene Sequence

<dnaseqindica>4544..4648#4377..4469#4078..4225#3838..3987#3559..3761#3302..3421#3046..3210#2870..2956#2640..2789#2423..2515#2171..2341#1649..1725#1325..1565#982..1245#740..827#580..641#259..486#gcgcgccaaacttgctccaaatcgaagtattattttctctcgcgatttctccgatttttttttctagcgataaattaattaatgctcctctcgccgcgccgggaaagcatttaaatctccccctcctccgcgcggttctcccaacccaaaccctaccacgattcctccccactcccaatccaatcgccgcggcggaggcggcgggcgcgcgtgcacaccaggtgttcgacggaaggcctcgccgggtggggggcgaagatgtacgtggtgaagcgggacgggcggcaggagacggtgcacttcgacaagatcacggcgcggctgaagaagctcagctacggcctcagccaggagcactgcgacccggtgctcgtcgcgcagaaggtatgcgcgggtgtgtacaagggcgtcaccaccagccagctcgacgagctcgctgccgagactgccgccgccatgaccgcgtcccaccccgactacgcctcggtaacagccactgaacttcaccgttgttggtttttttgttccccattcggtagtaccttgtctcctcctgacatgtggattgctgttgtgaagctcgcggcgaggattgcggtttccaacctgcacaagaacaccaagaagtccttctcggagacgtaagcgattgattgcttttgtttcagttgaatcatgcgaagggtgttgggatttatggattaggatgtgaattgggatttggtcgttatggatgcaggattaaggacatgtatggacatttcaacgagagatctgggctgaatgctcctttggttgcccacgatgtatatgaagtcatcatgaaggtgagatatcaaattaaactttagggacttgcactgatagctgttcttgttctgatttgtaaaatttactgttccattcaatttattggtcattaggattattgatgtatgttatgcttcttacggtttctgatgttctgatccttattttcagaatgcttctcgcttggacagcgagataatttatgatagggacttcgattatgattattttggtttcaagactctggagaggtcttacctcctgaaacttggcgggaaggttgttgaaaggccgcaacacatgttaatgagagtttcagtaggtatacacaaggatgacattgagtctgctatcaagacctaccatctgatgtctcagcgctggtttactcatgcttcaccgacccttttcaatgctggcactccaaggccccaagtactgcacatttgaccagaaaaatcctagtcttggactctgaaattgcttgcttactcttttattctctgcaatgcagttaagcagctgtttccttatctgcatgaaagatgacagcattgagggaatctatgatactttgaaggaatgtgctgtcataagcaaatctgctggaggaattggtgtatcagttcacaatattcgagctactgggagctatatccgtggaacaaatggaacctccaatgggattgttcctatgctacgtgttttcaatgatactgcccgttatgttgatcaaggtggaggcaagagaaagggtaggttctatggtcaattttatttgtgaaaattactctaataccataatctccaggaattctcataccctcctaaaaatcaggtgcatttgctgtgtacttggagccttggcatgcggatatttttgagttccttgatctgagaaagaatcatgggaaggtaaattctcaaccagatcctcttattaattcctttgcatagaaaactgtaaccatttaaatcttctggatttgttgcgacaatgagctgatttcaatgtatccttgcatctacattttctgaacttgaaatggattgcttacatgtaatagatgttatgatgcagagctgaatgttcaagtctttggtgcaaattagttataccattagaaaaaactggtggatagaagaatagcaggctctagtgtatttcttcctataatgttcagaagcttttcactatccagcatactgtgatcactggacaatttgatatgctttgaacaatttgatatgctttgcttgtgctgtttatgtttctaatatatgccatttctcctaacttaaaggctttagcctgaagaaagatctgaaatgcatgtttttatgaatgacaatttaataggaggagcatcgtgcaagggatcttttctatgcactctgggttcctgatctattcatgcaaagagtccaaaataaccaagaatggtcattgttttgtcccaatgaagctccagggttagctgattgctggggtgatgagtttgagaaactgtacacaaaatatgagagagaggtaagttggaaacgaaatttaattgtactacagtttattgaagttggaaaagattacaataacatagctttgtactttcagggcaaggcaaagaaaattgtcccagctcagaccctctggtttgacattttaaaggcacagatagaaactggtacaccatatatgctttacaaggtaaatttggtagcaaaattagtagcaaggagtacttgattttggacccaagattcctccaaatatgctgctggctatagtcaggttccaagtattcattccgaatgctcttgttgtcccacaggatacatgcaataggaaaagtaaccagcagaatttgggcacaattaaatcttcaaacttatgcactgagataattgagtacacaagccctactgaaactgctgtctgcaatctggcatctattgctttaccacgttttgtaagggaaaaggtatatcttgttagtgctttggctgatttcaaccctaaatgttgtatgtttacatgtctgatcataagattctgttgcagggtgtccccatagagtcccatccatctaaacttgtcgggagcagtgattctaaaaatagatattttgactttgacaagcttgctgaggtctgctgtctgatcgaatctgtttattctaaaaatagatactcttgcctatgtcagtgaatgttctgacacgctgttgattttaccaggttacttcaactgtcacatacaatctcaacaaaataattgatattaattattaccctgttgaaaccgcaaaaagatcaaatatgcggcacaggccaattggcattggtgttcaagggttggcagatactttcatattacttggcatgccatttgattcaccagaggtaacttttcctagttcagtaatatagtagtactagttagtagtccttcctacacttaactgatgtaaaaaatgtgatcccctcttttcaggctcagcaattgaataaggatatcttcgaaactatttactttcattctctgaaagcttccgctgagcttgctggtaaagaaggtccctatgaaacatatgaagggagccctgtcagcaaggttttttgcttttactaatgtcactttttttagtagctgaatttaccaatttatttattggtgtagtttgactaaattgttggttggatatcaacaagtaatattctttctaaggctgttttctatccacttttcagggcattctccaacctgatatgtggaatgtagttccatctgacagatggaactggccatctctacggagtactatttctaaagttggattaagaaactctcttcttgttgctccaatgcctactgcttccactagtcagattcttggcaacaatgaatgctttgaaccttatacatctaacatatacagccggcgggttctaaggtttgtaactacactgttcttagtgctcgtgctcactacaggtgcttatgattgattttgtttaattcttttccagtggggagtttgttgtggttaacaagcatcttctccatgatttgactgaaatgggtgtttggactccagctctgaaaaataagataatttatgaagatggttctgttcaaaagatgacagtgatcccagatgatctaaaagcaatttacaagtatgttgttcattgtcctaaactcctaatgctatgttctaccagatgcagatattcatttatctaaacgtttaacctcaattgttccagaacggtttgggagataaagcagaaaacgcttgttgacatggctgttgatcgtggatgctacattgatcagagccagagtcttaatgttcacatggaacaaccaaactttgggaagctgacttctctgcatttccatgcttggtccaaggtattattaaggctatgtgaaagcatattcctgaactctatgcagcccatatttattctgtatttgtcatgccatgaaaaagaactgctgtctttagattgtgtttttgcaaggtctacaagtaaacatggtttcatcttggttgatttagggcctgaaaactgggatgtattatctacgaacacgagcagctgctgacgcaatcaagttcacagttgatactgcccttttgaaggccaatggagtatgtcttctggccctccccataattgttttacattcctgaatagccaactcaccattaaaaatattgttcaggaaaacggcaccaaggctgcagaggaagaggacgtggaagctaaaatggctcaaatggtttgttccttgaacaaccgggaggagtgcttggcgtgtggaagttagatgcttcactacacagttaaaatctatttttaaccaagacgacaccattatacaactggctgatcatttggtctcaataactgaaaagggagcccttcgtgtagtttgtatgagctgatttccatactggggggtagtggggctcccctgtctgctgaatttcatctttggcttgtactgtaacatcaaaattcttgggttactgcaaatgtacatatgtgttactgttaacgttattgacgtgtggtgttgccatgttggcaatggtactttgggtttgggagtctcatggttttgtatttgcttttgcgttatcattttttgatgtggtacgagtggcacatctttggctgtgtgatattttcaatttgttactgtaatggaatttatcaggagctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0168600, RefSeq:Os06g0168600