Os09g0491788

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0491788| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001188990.1 GI:297727110 GeneID:9272624| Length = 3...")
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Gene Name

Os09g0491788

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001188990.1 GI:297727110 GeneID:9272624

Length

3878 bp

Definition

Oryza sativa Japonica Group Os09g0491788, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19648255..19652132

Sequence Coding Region

19648508..19648697,19648811..19649000,19650969..19651134,19651410..19651595,19651679..19651848
,19651947..19652076

Expression

GEO Profiles:Os09g0491788

Genome Context

<gbrowseImage1> name=NC_008402:19648255..19652132 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19648255..19652132 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcctccgcctccgccgccgcggcgccccgtgtgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcccgtggctacgccgtccacgccaccctccgcgacccagatgatcccaagaacgcgtttctgaagcagctggagaacgctccggagaacctgcgcctgttcaaggccgacgtgctcgacggcggctcgctgacggcggcgttcgccggctgcgagggggtcttccatccggccactcccgtgccggaacacaagacggtcgatccggagaaggagatgctggctcctgctgtgaaaggcaccagaaatgtgctcgaggcttgctctgctgcgagcgttcagaaactcgtcgtggtctcatccatctgtgctgtttgctttaacccgagcttgcctcgagacaggctcatagatgagacttgctggtcagacaagaagtcatgcaaagaaaatgagaactggtactgtcttgccaagaccgaagctgaagagatggccctggaatattcagagaaaaatggactgcatgtcattacggtttgccctggcgttatctttgggccactgttgcagactgtgctactcaacaccagcagcaaagttctgctctacatcatgaaaggaggccctgatgcactaagcaacaaattctttcccatagtcgatgtccgcgatgtcgccgatgctttacttctagtgtacgacaaggcagggccatctgagcgatacatctgttctcaagaacaaatggacatgagggatttgttggatttgatgaagagcatgtaccctaactacagctacacagccaaagtggttgatgtggatatgactacgagtgttgaattgacatcagagaagctgaagaagctgggctggaaacctaggaaactcgaggagacgcttgtcgacagcgttgaatcctacaagaaggcaggctttgtagatgacgaaccttgccggcttccccatctttaccgtgcaccagatgctcaggagtga</cdnaseq>

Protein Sequence

<aaseq>MTPPPPPPRRPVCVTGAGGFTGSWLVKLLLSRGYAVHATLRDPD DPKNAFLKQLENAPENLRLFKADVLDGGSLTAAFAGCEGVFHPATPVPEHKTVDPEKE MLAPAVKGTRNVLEACSAASVQKLVVVSSICAVCFNPSLPRDRLIDETCWSDKKSCKE NENWYCLAKTEAEEMALEYSEKNGLHVITVCPGVIFGPLLQTVLLNTSSKVLLYIMKG GPDALSNKFFPIVDVRDVADALLLVYDKAGPSERYICSQEQMDMRDLLDLMKSMYPNY SYTAKVVDVDMTTSVELTSEKLKKLGWKPRKLEETLVDSVESYKKAGFVDDEPCRLPH LYRAPDAQE</aaseq>

Gene Sequence

<dnaseqindica>3436..3625#3133..3322#999..1164#538..723#285..454#57..186#acagttgcaggcttgcagcagtggtccagtggatacggaggtggtggcaaccggagatgacgcctccgcctccgccgccgcggcgccccgtgtgcgtgaccggcgccggcgggttcaccggctcgtggctcgtcaagctcctcctctcccgtggctacgccgtccacgccaccctccgcgacccaggtctcttcttgagttcttattttttctgttctttcctagtatcctcttgtgctgcatcttcttgtatgtgggtttctttatccttttcctggtttcagatgatcccaagaacgcgtttctgaagcagctggagaacgctccggagaacctgcgcctgttcaaggccgacgtgctcgacggcggctcgctgacggcggcgttcgccggctgcgagggggtcttccatccggccactcccgtgccggaacacaagacggtcgatccggaggtaaatactccatttacacacacacttctctgcaatctgcagttcttctgctgatcctatgtttgctaaacacgattgttcagaaggagatgctggctcctgctgtgaaaggcaccagaaatgtgctcgaggcttgctctgctgcgagcgttcagaaactcgtcgtggtctcatccatctgtgctgtttgctttaacccgagcttgcctcgagacaggctcatagatgagacttgctggtcagacaagaagtcatgcaaagaaaatgaggtcagaaattggcctctcttgcttttctctatcgttagtttttccttgattcatcagttagttattagggatgattgctagaaagtagctaggattaatttattttgagcaaaatgttgccaaactagtgttctacagatagcagcttaacacttcagagttcagacaactgcaaaaagaaaagggggaaaaaaagctcttttagcctttcgttggatttcctggttaatagtagctaggattaatttatgaacctcaaattcttgtgttggcagaactggtactgtcttgccaagaccgaagctgaagagatggccctggaatattcagagaaaaatggactgcatgtcattacggtttgccctggcgttatctttgggccactgttgcagactgtgctactcaacaccagcagcaaagttctgctctacatcatgaaaggttcacctcaccctcttttctcaatggagagaaactagagcacgctatcccgtccgaacggcatagttagaccttgtttagttcccaaaataaaaacttttcacccatcacatcgaatgtttggatatatgcatagagtattaaatgtggattaacaaaaaccaattacacaattagccaggaaattgcgatacgaatcttttaagcctaattgcgccatgatttgacaatgtggtgctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcggtttactgacgaattctataattagtttttttattagtgcccgaacaccccatgcgacaccctatataatacccgatgtgacacgccaaaactttacacccctgaatctaaacactccctaactttcaagcttcatgtataattttgatagatgggacgactacagagctaggccacatgctctgacatgcctatgtgctaggtggcttggatggagtcgggccaatatgtaatggatagatgctcttcgttatttctttttttttataaaatagggaatgagagctaggctgaccaattaggttgagtcacctagattgatacatgtgatgatactaatatttggagatacatatcatgtctatttgtatcaaacttgttggtgctcatgggtatctgacatggtaattatgtcctagatatggtaccgtattggacttggttactaggtatcggaaatggtatccataggtatcagacctgaggtctcaaatatggtaccataagtactattagacttggttactaggtatcagatatggtaccataggtatcagacctgaggtctcaaatatggtaccataagtatgggacttggttactaggtatcggatatggtaccataggtatcagacctgatacctaggtaccggatatggtatccacgaatactagacttgatacctaagtatcggatgtgatacccacgagtatcagaccaagtacgtaggtattgaacatggtaccaataggtatcaaacatggcacttattgtatcggatatgatacttatgggtctcagactaggtacctagatatatatcaaagatagtaatataggtatagtatcatgtttggtacctaggtaccgattaattgagatgaaaattagaaggtttcatcttaaaaaaacaaaatcaaaaaataagaaagaaaaggggacaatttagtgactttcccctcatcggtgctgcttcaatagtacaacgtaacaaatttctaaaaaattttgtagctgcatgccaagctagggtccattttatatgtggacatcaatggaaatccggagggcccatgtcatctcatccgcacatattcaacatggaccctacttctcgtcattttttatcttcccgagctatccgtatgagaagtggaaagttgcttgtgatttgtgagaatgcatgtgtcagatcatatgcaagcagggagcaggttctattaaggccctgtttagttctcgaaaagaaaatttttaggaattacatcggacgtttgaccggatgttggaaggggttttcggacatgaatgaaaaaactaatttcataattcgtctggaaaccgcgagacgaatctcttgagcctaattaattcatcattagcacatgtgggttactatagcacttatggctaattatggattaattaggcttaaaatattcgtctcgcgattttcatgcaaactgtgcaattagtttttctttaatctatgcatgtgtctaaagatttgatctgatgtttttgggaaaaaaaattggggaactaaaccgggcctaactataccgtgcaaacggtatctgttttctagcttttctcaatggtttatagtttctacagtttttgtttgttctggtgattggtgcactgattccatcagttttggttgcaacgcaggaggccctgatgcactaagcaacaaattctttcccatagtcgatgtccgcgatgtcgccgatgctttacttctagtgtacgacaaggcagggccatctgagcgatacatctgttctcaagaacaaatggacatgagggatttgttggatttgatgaagagcatgtaccctaactacagctacacagccaagtaatttgccttgtatcattatcatcatcaactatcctattcatgacagagaaactgaaatgacatcaggttattgcatcagtatcacaagatgaacacaattatttttgcagagtggttgatgtggatatgactacgagtgttgaattgacatcagagaagctgaagaagctgggctggaaacctaggaaactcgaggagacgcttgtcgacagcgttgaatcctacaagaaggcaggctttgtagatgacgaaccttgccggcttccccatctttaccgtgcaccagatgctcaggagtgaacagccggcgccgtcttgctgctactgttcttgatctaattgtcactgaaaaaaaaagtttccaataatactgtaatagatgagggatcaggtgttcctgtccagtgtccacattatcatctgctctgttccattagtgaattgattcagcctgtgatcaatgacacaatttatgcctggcaataattgaatattgtctactgattaagatggacaattgtgtgtgtaattttaatatatccgccacccgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0491788, RefSeq:Os09g0491788