BGIOSGA026491

From RiceWiki
Revision as of 17:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA026491

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026491, complete gene.

LocusTag

P0562A06.8

Ensembl Transcript ID

BGIOSGA026491-TA

Ensembl Protein ID

BGIOSGA026491-PA

Length

4359

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:29902235..29906593

Sequence Coding Region

29906398..29906593,29906089..29906290,29905869..29905989,29904955..29905017,29904794..29904868
,29902235..29903479

Genome Context

<gbrowseImage1> name=IndicaChromosome08:29902235..29906593 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:29902235..29906593 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGGCAATAAGCAGTCCCTGATATACAGCTTCGTGGCCAAGGGCTCCGTCGTGCTGGCCGAGCACACCGCCTTCTCCGGCAACTTCAGCACCATCGCCGTCCAGTGCCTCCAGAAGCTTCCCCCCAACACCTCCAAGTCCACCTACTCCTGCGATGGCCACACCTTCAACTTCCTCGTCGACCGCGGCTTCGTGTTTCTCGTCGTTGCGGATGAGGCCGTTGGAAGGAGCGTGCCGTTTGTGTTCCTAGATAGGGTTAAGGAAGACTTCATGCAGCGGTATGGCTCCAGTATCGACGAGGAGGGTCAACACCCGCTCGCCGATGATGCAGATGATGATGACTTCCTCTTGGAGGACCGATTTAGCATCGCCTACAATCTTGACCGGGAATTCGGACCGAGGCTGAAGGATCACATGCTGTATTGTATTAATCATCCAGAGGAAATTAGCAAGCTCTCCAAAGTGAAAGCACACCTCACGGAGGTCAAAGGGATTATGATGGACAACATTGAGAAGATATTGGAACGTGGAGAGAAGATTGAGCTTTTGGTCGGCAAGACTGAAACCTTACAATCACAGGCTGACAGCTTCCACAGGCATGGAAGAGAGCTCAGGCGTAAGATGTGGCTTCAGAACCTGAGGTTTAAGTTGATGTTTGAGCACTTCTCTCTGAAACAACGAAGTGAGCCGCAGATACAAGCCTTTAGGGATGTGGTCCAGAGATGTGAACTCCATGATCTGGGGTTCTCGGGGGTGCCATACACTTACGATAACAGGAGAGAAGGCCGCGGCAATGTTAAAGTGTGCCTAGACCGCGCCCTTGCAGATGATGGGTGGAGGGGACTGTTCTCTACAGCACAGGTGTTTCATCTGTCCTCTCCTAGATCAGACCATTGCCCCATCCCTGTCAAATTTTATTCTGAAGATCTTCGCAGGAATTTTGCGAAGTGTGTCCATTATGAAATTTACTGGGAAAGAGACCCTGCAATCTCTGAAGTTATAGCAGAATCTTGGGGCATTTCCGGAGCTAAGCAGGATCTGAGCGACACTAATCAAGCTCTGTTTAGGATGATGTCTAACCTTCGCACATGGAGTAAGAAAAAGTTCAGGAATGTCAGCCGGGAGATTGAGAAAACTAGAAAGAAACTATCTGAACTTCTTCTAAGTAATACCGACAGCATGGAAATAAGACGGGTGTCTGATCAAATGAACGAACTTCTGTACCGTGAGGAGATGATATGGCTGCAACGATCTCGAATTGCTTGGCTGAAAGAAGGTGATAGAAATACACGTTTCTTTCACAGCAAAGCAGTGTGGAGAGCAAAGAAGAATAAGATTACAAAGCTACGGGATAGTGACGGTACTGTTCACAGTACGACAAAAGAGTTGGAAAGCATGGCAACTGAGTATTTCCAAAGGCTGTTCACTGCCGACCCCAGCATTGATCATTCGAGAGTCACTAGCCTGATAAAGCCGAAAGTCACGGATGCGATGAATGAGGAACTATGCAAAACCGTCAGTGAAGAGGAAATTGCAAATGCCCTGTTCCAAATTGGTCCATTAAAAGCACCCGGGCCAGATGGATTCCCTGGTCGGTTCTATCAGAGGAATTGGGCTATACTAAAGGACGACATTGTGCGAGCAGTACAAGAATTTTTCTCTTCGGGTACCATGCCTTCGGGGGTCAATGAGACTGCCATTGTTCTGATACCGAAAACTGAGCAACCACAGGAACTAAAGGATTTCAGACCTATCAGTTTGTGCAATGTGGTCTATAAAATAGTGTCTAAATGTTTGGTGAACAGACTAAGACCAATCCTGGATGATCTGGTGTCGCAGAACCAGAGAGCTTTTGTCCCTGGTAGATTGATAACAAATAATGCCGTGATAGCATTCTAA</cdnaseq>

Protein Sequence

<aaseq>MNGNKQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFLVDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDFLLEDRFSIAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEKIELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMFEHFSLKQRSEPQIQAFRDVVQRCELHDLGFSGVPYTYDNRREGRGNVKVCLDRALADDGWRGLFSTAQVFHLSSPRSDHCPIPVKFYSEDLRRNFAKCVHYEIYWERDPAISEVIAESWGISGAKQDLSDTNQALFRMMSNLRTWSKKKFRNVSREIEKTRKKLSELLLSNTDSMEIRRVSDQMNELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKITKLRDSDGTVHSTTKELESMATEYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQRAFVPGRLITNNAVIAF</aaseq>

Gene Sequence

<dnaseqindica>1..196#304..505#605..725#1577..1639#1726..1800#3115..4359#ATGAACGGCAATAAGCAGTCCCTGATATACAGCTTCGTGGCCAAGGGCTCCGTCGTGCTGGCCGAGCACACCGCCTTCTCCGGCAACTTCAGCACCATCGCCGTCCAGTGCCTCCAGAAGCTTCCCCCCAACACCTCCAAGTCCACCTACTCCTGCGATGGCCACACCTTCAACTTCCTCGTCGACCGCGGCTTCGGTAACACCCCTCTTCTTCTTATTCTTATCTTTCTGTGGGAACTGAACTACAGTAGTTAGTAATTGTGATATCTGTTGAGCTCACTTGGGTTATTTTGGGGGCTGCAGTGTTTCTCGTCGTTGCGGATGAGGCCGTTGGAAGGAGCGTGCCGTTTGTGTTCCTAGATAGGGTTAAGGAAGACTTCATGCAGCGGTATGGCTCCAGTATCGACGAGGAGGGTCAACACCCGCTCGCCGATGATGCAGATGATGATGACTTCCTCTTGGAGGACCGATTTAGCATCGCCTACAATCTTGACCGGGAATTCGGGTATGAAGTCACCATATGCTGTGCTACCTACATATGATGTTTCTTTCTTTTACTAGTATCAAATGTGTCTTTAACATGTGTTTTTGTGTTTGGGTATAGACCGAGGCTGAAGGATCACATGCTGTATTGTATTAATCATCCAGAGGAAATTAGCAAGCTCTCCAAAGTGAAAGCACACCTCACGGAGGTCAAAGGGATTATGATGGACAACATTGAGAAGGTATGTGCTCAAAACAGTGCTTTCTTTGCTGAAAGAATATAGTATATTGTGTACGGAAACAATTGTTGTGTAAGTAAGGTTTCCCAAAAACTCTGGATTATATTGTTCTAGACACCTAACAGTTCCCCTGTTCTATTCATGTATGGTCATATTTCTGTGTGATTTATTTCTTTGATGAAGTAAACGTGGATATCATGTCAGGGTATGATGTAAACATGTTTCACCTTTTCTGCTCAATGAAAAATCGCGTAAACTTGTTTCACCTTTCCTGCTCAATGAAAAATTGCAAATGGAAACATTTTCAATAGTTCATGGGCCACATCCCATGCTGCTTGGAAGTTCCTGCAGAATATTATTACTGTGTGCAGTCTATGTTGCTATGCATAGAAGTGCTCTGGTGTCTGTTGGTGTGATTAATTTACAAATTGAACAAGTAATGATGGGATCTTGAGTTTTAAAATAAAGATCAGTTTTCCCCCCCTTTTTGTGAGTTAGTACATACTGTTGTCATTGTGGTGATGAATCGTCTGCTTATTGTTTTGCCCACGTATTTGAACTTTTTTTTTGTTACAAAGTCTTCACTATGACAGTATGGTTATTGGCACGCTAGTTTCAATACCTTGGGATATAGGAGTATCATTTTAGTTATGCTGACTTTCCAATATAGAAACCCATGTCTAGTACTCCTACCCAGTATGTAATTAGTCAGTCTGGCATTTTACAGGAAGCCAGAGAATGCAAACAATATTTGTGGCCTCATGTCATTTTAGTATTTAACTGAATACAGAAAAAATAAACTCCTTTCTTGATGTTTCATACTACTGACTCTTACTGTCCTGGATTTTGTATAGATATTGGAACGTGGAGAGAAGATTGAGCTTTTGGTCGGCAAGACTGAAACCTTACAATCACAGGTATGGAAAATCTGTGTGAAATTTTTGTTTCTGTAAGAATGTTTAAGTAACCATGACTAAGTGGTGTGTTTTCAAATAATCTTCAGGCTGACAGCTTCCACAGGCATGGAAGAGAGCTCAGGCGTAAGATGTGGCTTCAGAACCTGAGGTTTAAGTTGATGGTGGGTGGTGCTGTTGCGGCGTTGATTCTCTTCCTCTGGCTGATTATTTGCGGGGGCTTCAAGTGCTAGAACATTGAAAGCCTTTTTCTTTTTTTTGCATTCGATGTGTTTACCGTGTCGTGTGCATATATAACGACCAGCAAATCCTGCTTTCGATATGCTTCGTGCAGAGTTAAATCTCCTTATGGACCTTTATTCCTTGTAGCCTGTTCTCATGTTTCATAGTATTACAATAGGGGGGCTCTGGAAATGGAATACTTGTGTAAACAAACCTTGTGAAAGGAGACAACTTAGCTATCTGTATTATGTACATTCTGAAATGCTAATAGCTTATTTCAATCTCATTTTCATTGGTCATTCTCAGCTGGTGTCCTAAATGTTGATTGCGTACCGCGCGTCTGCGCCAGATCATTTAACTCGCTATTCATATTCTGCAATTAATCGATTCTTTGAACTGTAAGGGTCTATCTCAAGATTAGGATGGCGCACCGAATTTCTGATTGCATGAAAGATATAGTTTATCTTCACAATTTGCAAAGGGAGAAAGGCTATATATGTTGATATGCACTCTGCTTCTATCAATCCCTCCCGTGCTATGTTTAGCGGTGAAGCAGGTGTGGATATACCTCAACTGACAGCATATGATCAGTTAAACTGAATTTCATACGGAATGAGTTAGACTGACTATGCCTAATCACTTTCATTGCTGCCCTTTTTTTTCTCCCTCTTCTAGCGTTGCGAGGTAAATGTATTAGTTAGAGAATTCAAGTTCCTGTTATATAAATTTATAAAAATTACGGAACTGGAACAACACAAAGGGTGTTTGGTCTAGTGGTATGATTCTCGCTTCGGGTGCGAGAGGTCGCGAGTTCGATTCTCGCAACACCCCGTTGTTTTTTTCCCAATTTTGCTTCAACGGATGACCAATTGCCTGTGCCATTTACCTGAGTCTAATTAGCAGCTATTTTTGACTTTTATTTTTCCCACCTTGTTTGTGCATGCAACCGCGTATAGAAATATTTTCACAAGATAGGTATGTCTTGTTTGAACCAAATATGGGTTCCGGCACTTTGTATCGCCAATTCTGAGATATCACCATTTTTTGGTGGAAATAATAGTAGCCAAAATTGTCTAAGTACGAGTCTGTACAACATGGTACAGATTGGAGGTTAAAGCAAAACCAGTTTACTTGTGTGAACATAGTTGTGCTCTGGTTAGGGTCCATGTGATAAAAATCATAGGGTACGTACGTTTGATGGTTAAAGAAGGTACCCGTGGTTAGTGGTGGGTGATTTTAATGAGACTCTTTGACAGTTTGAGCACTTCTCTCTGAAACAACGAAGTGAGCCGCAGATACAAGCCTTTAGGGATGTGGTCCAGAGATGTGAACTCCATGATCTGGGGTTCTCGGGGGTGCCATACACTTACGATAACAGGAGAGAAGGCCGCGGCAATGTTAAAGTGTGCCTAGACCGCGCCCTTGCAGATGATGGGTGGAGGGGACTGTTCTCTACAGCACAGGTGTTTCATCTGTCCTCTCCTAGATCAGACCATTGCCCCATCCCTGTCAAATTTTATTCTGAAGATCTTCGCAGGAATTTTGCGAAGTGTGTCCATTATGAAATTTACTGGGAAAGAGACCCTGCAATCTCTGAAGTTATAGCAGAATCTTGGGGCATTTCCGGAGCTAAGCAGGATCTGAGCGACACTAATCAAGCTCTGTTTAGGATGATGTCTAACCTTCGCACATGGAGTAAGAAAAAGTTCAGGAATGTCAGCCGGGAGATTGAGAAAACTAGAAAGAAACTATCTGAACTTCTTCTAAGTAATACCGACAGCATGGAAATAAGACGGGTGTCTGATCAAATGAACGAACTTCTGTACCGTGAGGAGATGATATGGCTGCAACGATCTCGAATTGCTTGGCTGAAAGAAGGTGATAGAAATACACGTTTCTTTCACAGCAAAGCAGTGTGGAGAGCAAAGAAGAATAAGATTACAAAGCTACGGGATAGTGACGGTACTGTTCACAGTACGACAAAAGAGTTGGAAAGCATGGCAACTGAGTATTTCCAAAGGCTGTTCACTGCCGACCCCAGCATTGATCATTCGAGAGTCACTAGCCTGATAAAGCCGAAAGTCACGGATGCGATGAATGAGGAACTATGCAAAACCGTCAGTGAAGAGGAAATTGCAAATGCCCTGTTCCAAATTGGTCCATTAAAAGCACCCGGGCCAGATGGATTCCCTGGTCGGTTCTATCAGAGGAATTGGGCTATACTAAAGGACGACATTGTGCGAGCAGTACAAGAATTTTTCTCTTCGGGTACCATGCCTTCGGGGGTCAATGAGACTGCCATTGTTCTGATACCGAAAACTGAGCAACCACAGGAACTAAAGGATTTCAGACCTATCAGTTTGTGCAATGTGGTCTATAAAATAGTGTCTAAATGTTTGGTGAACAGACTAAGACCAATCCTGGATGATCTGGTGTCGCAGAACCAGAGAGCTTTTGTCCCTGGTAGATTGATAACAAATAATGCCGTGATAGCATTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026491