Os06g0170500

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0170500| Description = Similar to RNA-binding protein-like| Version = NM_001063466.1 GI:115466663 GeneID:4340263| Length = 3537 bp| Defini...")
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Gene Name

Os06g0170500

Description

Similar to RNA-binding protein-like

Version

NM_001063466.1 GI:115466663 GeneID:4340263

Length

3537 bp

Definition

Oryza sativa Japonica Group Os06g0170500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3535684..3539220

Sequence Coding Region

3536216..3537065,3537612..3537835,3538243..3538512,3539051..3539155

Expression

GEO Profiles:Os06g0170500

Genome Context

<gbrowseImage1> name=NC_008399:3535684..3539220 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3535684..3539220 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccgacttccccatcatctgcgagtcctgcctcggcgacaacccctacgtccgcatgttgagagcagaatatgataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgttggcgacctggccgggatgcaagatacaagaagacagagatctgccagacatgttgcaaactgaaaaatgtctgccaggtctgcctgctagatcttgaatatggtctaccggtccaggttagggatacagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtgagtactttgcagaagagcatgatcgcaaggccagggctggaatagattatgattcttcccatgggaaggcacgtcccaatgacaccattctgaagcttcagaggacggcaccatattacaagaggaatcgagctcatgtctgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatgcctgaaactggagagttatctcagcagaacattaaagatcgttactatggagttaatgatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctgacacctccagacgatgagagtataaggacactttacattggtggccttaataatcgaatcaccgagcaggatttgagggatcaattttacgcacatggtgaaattgagtccataaggatggttctgcaacgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctgcagaggagcttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggtaagcctcaagcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatggaggaatgctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccacctggaatggagggacaacagcaagcaccatcgggatcatactacttcaacattccagcaccgccaggagcagagcggacactgtacccttcaatggatccccagaggatgggtgccttggtcaagtcacaggagggtgatggcaaacccggtccacagcaggcagcccaagctcaggcatcaagcagctcaggacagagttaccctatgccaccacaatattaccatggtcagtacccaccctactacccaccgtatggcggttacatgcccccacctcgcatgccatacccaccgccaccgcagtatccgccttatcagccgatgttggcaacaccagcacagtcgcaagctagctcatcacaacaacctgcaccagcaacgctgcaccaggctcaagtccctcctccgcagcagacgacccagaactga</cdnaseq>

Protein Sequence

<aaseq>MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKEC KICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALAI NSNDAIPRSDVNREYFAEEHDRKARAGIDYDSSHGKARPNDTILKLQRTAPYYKRNRA HVCSFYVRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMPS LTPPDDESIRTLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGA EKAAEELANKLVIKGIRLKLMWGKPQAPKPEDDEAGRQGHVAHGGMLPRAVISQQQSG DQPQPPGMEGQQQAPSGSYYFNIPAPPGAERTLYPSMDPQRMGALVKSQEGDGKPGPQ QAAQAQASSSSGQSYPMPPQYYHGQYPPYYPPYGGYMPPPRMPYPPPPQYPPYQPMLA TPAQSQASSSQQPAPATLHQAQVPPPQQTTQN</aaseq>

Gene Sequence

<dnaseqindica>2156..3005#1386..1609#709..978#66..170#gtctctctctctctttcctctcgtctttctcggcggcggcggaggcggaggcggcggcggcggagatggctcaccggctgctgcgagacgcgcaggcggacgggtgggagcggtccgacttccccatcatctgcgagtcctgcctcggcgacaacccctacgtccgcatggtaccgtgtctcttgcccccccacaaaccctaaccgcatctgattgattcgcgctcttggtggttcatgtggtggctgcgggcgcggtgatttcagcctgcctggtttgcgattgctgttgttattggggtagatcgggggtcaaaagttaggcgtcggtttctgtgggatgtattgcggtacgtgtgttgttgtagttgttctgatttagcgacgagttaggccgaaaagattgctgctctagggtggattttgttggtttcatgtaccgaaatggtgtttgtttcgcaaattgcagtagtatgattatagaattttatttgtggaggataacctagccaagaaaacgagaacaaattgtcaagcagaagaccaggcattgtgtaggggtccaatactaagcaattagatgtggatgagattgtctccacatccaaacatttattactaatcaaatttatcattgtcggcacatttagtttgcttatgatcttgatatggacacaagatttactgtctttcttgtttgtcttggcagttgagagcagaatatgataaagagtgcaaaatatgtgcacgtccgtttactgtcttccgttggcgacctggccgggatgcaagatacaagaagacagagatctgccagacatgttgcaaactgaaaaatgtctgccaggtctgcctgctagatcttgaatatggtctaccggtccaggttagggatacagcactcgctattaattcaaatgatgcaatcccaaggagtgatgtgaaccgtgagtactttgcagaagagcatgatcgcaaggtatgtctcctttttcacaacttattatttgtatcaactttcacaatactcatctaaaatggtttatgtccatatcactgctattttcatttttcttccctgcaactagtatgtccacagtgttccttccatttttattgtctagtctattctagtagcataacacattaaggaaattaatgggttttcttagaccagaaacctaatgttgtaaggaatataaaatgaatgcactttaagtgtgttgatctcaaataacaaacgatgtacccttttttaagtagtttggtccggcagagtgcctgcacatgctttctgcctatgttaatcatgatctaattattcttcctgcctctaaatgtatggattatttgttcttatggtaggctttctttatcaaaatgtaggccagggctggaatagattatgattcttcccatgggaaggcacgtcccaatgacaccattctgaagcttcagaggacggcaccatattacaagaggaatcgagctcatgtctgcagtttctatgtgcgtggtgaatgtacaagaggtgctgaatgcccttatcgacatgagatgcctgaaactggagagttatctcagcagaacattaaagatcgttactatgggtatgtttgtgctgattgtgcatacaattttttgaactgtgtgcttgttttggttctctatggatattagcatatttttatttctcattaagaggcaacaattaatgatcattatactccaaagatgcctattgatccttttttatatctgttagacctgctatttctaactaattttaatattaagactatcatcaaaactaaatccatgtgtagtgtctcaggatgcaaaccagcatctgcatgcatagtacttgtaactctggatatgaattccatcatcagtgtctatggatggatgaatgatgaagtaaaagaaatcttggtatatttcaatcaaattggactttacattgtttagtacaatatggtgtggtagcacacctgagatcttgttgatgcacacctactgatggtttaatcatgtccgtgagatgaaccgacttgttttttttcttcactgtactcttttggttcatattgcacttagttctatttatatattacttcacattctctgacgcattctcttcttgctcattacagagttaatgatccagttgctttgaaacttttgggtaaggccggtgagatgccatccctgacacctccagacgatgagagtataaggacactttacattggtggccttaataatcgaatcaccgagcaggatttgagggatcaattttacgcacatggtgaaattgagtccataaggatggttctgcaacgtgcctgtgcatttgtgacgtacactacaagagaaggtgctgagaaagctgcagaggagcttgccaacaagttagtcatcaagggtatacgcctgaagctcatgtggggtaagcctcaagcaccaaagccagaagacgatgaagctggaaggcaagggcatgttgcacatggaggaatgctccccagggctgttatatctcagcagcagagtggtgaccagcctcaaccacctggaatggagggacaacagcaagcaccatcgggatcatactacttcaacattccagcaccgccaggagcagagcggacactgtacccttcaatggatccccagaggatgggtgccttggtcaagtcacaggagggtgatggcaaacccggtccacagcaggcagcccaagctcaggcatcaagcagctcaggacagagttaccctatgccaccacaatattaccatggtcagtacccaccctactacccaccgtatggcggttacatgcccccacctcgcatgccatacccaccgccaccgcagtatccgccttatcagccgatgttggcaacaccagcacagtcgcaagctagctcatcacaacaacctgcaccagcaacgctgcaccaggctcaagtccctcctccgcagcagacgacccagaactgaaggccttaatcttactagacgagtgataaacagttagctggaaacaaatgatggttttaaacttttaatggacgctgcgaacaaaacgtgaagatgaatgaagttgctttcagcttcaggctttcagcaacttgggctggtatggatgttctccctgtatctgatgtgccattgaggcagcagcaggcttttgatgcggcgatatgtgcggccgcaaagcaagctgcagagccgaacgcttggagcctgtggtcattgttgcttgataaggtgtatcaacactgttgttattatacaatttcaaatctgtgcattttctatattgctatagatattgctactgttgtattcctagaatctgttctttggaggactgtaaccctcgtttattaccagctttcttttgtatgttgtaatgtgtgactcgcagtacttagtactcctaaatgtttatctgattcatcttagctgagaaaaatactggaatttgtccagctatactaaaatggaagcggaattcagtttcttgtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0170500, RefSeq:Os06g0170500