Os06g0171500

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0171500| Description = Conserved hypothetical protein| Version = NM_001063469.1 GI:115466669 GeneID:4340266| Length = 3054 bp| Definition ...")
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Gene Name

Os06g0171500

Description

Conserved hypothetical protein

Version

NM_001063469.1 GI:115466669 GeneID:4340266

Length

3054 bp

Definition

Oryza sativa Japonica Group Os06g0171500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3584218..3587271

Sequence Coding Region

3584752..3585508,3586951..3586955

Expression

GEO Profiles:Os06g0171500

Genome Context

<gbrowseImage1> name=NC_008399:3584218..3587271 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3584218..3587271 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtggtcgaaagaagccgggttccaagaagatgccaacccctgctgtgatgcgcatccgctctccacctccagacccgcacaggagggcgcgagctgcgccccgaaggtgcatccctccattggcttcggattccgagtcgtctgcttcttctccgacgacttctccagccgccgccgcggctgctctgcctggcatcgctcaagcccggcacgagttcttcgccaagcacacggtgtaccactacggagcgcctccgactgctcaacgaaacgagcagcgggagagcgcgggaggatgccagagcgtgcgcggcggagttcgccgccaaccagctgacggccttgccgctgcggcggggcgaggacatctccgcggcttcctcctcgcgccgtcaagaatcggtggcggagcgcgcggggcggtggatgctcctggactcatcggcgatcggtttctcgactccggccacggcagcttggccggtaccggaatggacgcaccagccggcggggaacgcattggagtacggcccatggaatcctccgacgatgacagcaccttctgctccaggtgcgcccgagctcagcggggagccgccagcgccaccgccctcgtcacgaccgctgtcgccgccgccacctccgccaggtgtcattccaccaccgccgggcgtgatcccggcgccgccacctgcgtggtggacggagcaccaccaccacccggcggcgtctatgccaccacgaggaccatagcctag</cdnaseq>

Protein Sequence

<aaseq>MGGRKKPGSKKMPTPAVMRIRSPPPDPHRRARAAPRRCIPPLAS DSESSASSPTTSPAAAAAALPGIAQARHEFFAKHTVYHYGAPPTAQRNEQRESAGGCQ SVRGGVRRQPADGLAAAAGRGHLRGFLLAPSRIGGGARGAVDAPGLIGDRFLDSGHGS LAGTGMDAPAGGERIGVRPMESSDDDSTFCSRCARAQRGAASATALVTTAVAAATSAR CHSTTAGRDPGAATCVVDGAPPPPGGVYATTRTIA</aaseq>

Gene Sequence

<dnaseqindica>535..1291#2734..2738#agacttggccctccaatccacactggtgttcgctgcctccgcggccggtgataggacgagttcggctccgaacgcctcagtgctgctctactcgcacatgaggtgttcgttcaaatgcttgcgagttgttcgcctcttgttctgcttctacctatcaccggcgagacgtagccgggacgacgatgctggcagccgtggacgccgtggctgactctcgccggccgtgagcctgtgcaagcagcaggcagcggcaacaggttctcgtcgcgaggcgaggatgacgtcatcgagcatgtgggcccacctgtcagcggacatgggactgcggccccacctgtcagcgaagggttgaactcccttcaaattgcacccgccttgccgccgagagcgccgagccgtaaccttggccaacgaacttctctcctccctccgttctcccctcgccggtgagccaagaaaccaagaacccactcgccgcctccgctgctcgccggacagagcgccaagaaaccaagagccgcctcgcctgacgccatgggtggtcgaaagaagccgggttccaagaagatgccaacccctgctgtgatgcgcatccgctctccacctccagacccgcacaggagggcgcgagctgcgccccgaaggtgcatccctccattggcttcggattccgagtcgtctgcttcttctccgacgacttctccagccgccgccgcggctgctctgcctggcatcgctcaagcccggcacgagttcttcgccaagcacacggtgtaccactacggagcgcctccgactgctcaacgaaacgagcagcgggagagcgcgggaggatgccagagcgtgcgcggcggagttcgccgccaaccagctgacggccttgccgctgcggcggggcgaggacatctccgcggcttcctcctcgcgccgtcaagaatcggtggcggagcgcgcggggcggtggatgctcctggactcatcggcgatcggtttctcgactccggccacggcagcttggccggtaccggaatggacgcaccagccggcggggaacgcattggagtacggcccatggaatcctccgacgatgacagcaccttctgctccaggtgcgcccgagctcagcggggagccgccagcgccaccgccctcgtcacgaccgctgtcgccgccgccacctccgccaggtgtcattccaccaccgccgggcgtgatcccggcgccgccacctgcgtggtggacggagcaccaccaccacccggcggcgtctatgccaccacgaggaccataggtgagatttcctggtgatgcaccatcgtccatcggtttcctcgctgggttcttcggggaccaattcttgatcttttcttgtgtcaaatttctgcattgtgttagttccattcctgtatgcaattctttgttcagttcttgcaatagtttcctcctctatcgctaatttgctaatcctaatcgtgcgctgcgtcctgcgcacgggaaagtaattcttagtagcattttagctcaagatatccgttctgtgtgttgcactagtagagggagcagttcttggtttcatctaggttgtcaggttcttcacttcttgctcctctgaatttgctctgctccaggatgcatttcttaggatgattcttgataacagcgaactgttactgttgctaaaatatgacctgaagctagttttgtgatttcagaacaatgacttgttagttgcatacatgttcgttctcaatcctgataaagaaattctggtttcatgcacagatccttagatcagaaaattcagttgctccttttgttgttttgtcttggtagtggtgttgagggtttaagcccagatccagctccttttcagtctaagaaaaatggtttttgatttaagacaaccctacatgcattgtatatactctaactaaaatgtcttattgttttgtgacaactcatgtactgatgatatctttctaatgaactgtttttaataagactctatgcacttgtcatcaaggtaaatgcacacatgttttgttgagagaaacattttttctttgatccaaaattttattgtcagaaacttgtctgaaaaataagtaggtattcagagtttggcttgtggtttttcaatctgtgtatagatgctaaaatatggcctgaagctagttttgtttgtgattcagaacactaacttgttagttgaagtgaaggtcgggttttatccattatctaaaaactcatgcgcaaacctgatacagaaaataccagtttcatacaccaatctagttcagaaaattcattgatcctttttttaacttgttagtagagttaaggtatttaagaccagatcatcttagtaatctattttcagtcttagcaacagtctttgatttaagagagtcttacatgcattgcacatactctaacttgtaaaaatgttcacttgtaccactgtactatagacaaatgacaacactgttgccattaaaccatgacacaagcttctggtcataatgctggtttctagatgagttaacccttttattatttttgctgttcacttaaatatttttacataatggtgacccccagatgtttttagctgatctcttaatattgaacaacttgtgagttgtgtatctgtaattaacttgtcttattgttttatttggtcctttgcaaattcagttgctgatcggttgagacaccccaatgttaatgcagcctagaggaagaggaaccgcaggagcagaacctctgacaatcacttcttcattatctcttcagaagtttctgctgcttcagatcgaatgacagagaggggatgtcttctttttttcttcttctcctttttcttcttcttcttttgttaatatgggctcagggtaggaaatcgtcaaaccttctgtttcccggttgttaattagctattacccattatgttctgatgaagttcacaaactgctgtaagcaaccgtacaatgtgcgcctgaacaaattgtgcgttccggcattatattggtataaatcttgtgagtgcattct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0171500, RefSeq:Os06g0171500