BGIOSGA026620

From RiceWiki
Revision as of 17:03, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA026620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026620, complete gene.

LocusTag

OJ1191_A10.131

Ensembl Transcript ID

BGIOSGA026620-TA

Ensembl Protein ID

BGIOSGA026620-PA

Length

5916

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:27923029..27928944

Sequence Coding Region

27928939..27928944,27926702..27927208,27926392..27926607,27923959..27924162,27923800..27923869
,27923416..27923516,27923029..27923274

Genome Context

<gbrowseImage1> name=IndicaChromosome08:27923029..27928944 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:27923029..27928944 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACACCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACATCTTCAACAAGGTGAGGGAGGAGAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACGGTTATTCCAAATATCATAAGAATCATGAGTACTGCAAGTACTGCACGCTCTAGGAAGCGAGCCCATGATGGATCCAGACAAAAAGTTGATGTTATAAACTTGGAAACAACTGCTCCAGTGGTGAACACTGGGAGCCAGCATGAGGCTCTGATCCTTAGGGGTACACGGACCTCACCCATCGATGTTGAAGCTCTAGATGATAAAAGGAGGAGCAGAAAAATTATGAGGCGCTCTGTGGCTGTAGTGGATCCGGAGAAGGATACTGGTCCGGGAGGTTATGGCGTTGCTGGAGCTATATTTTCCCGGGGCAGAAATTTTCAGGGTGCTGTACATGTTATATGCCTTTCTCCAGATAGGGAAGAAGGGACCAGCAAGCCGAAAAATGTGGCCCAAACCAGTACGACGCATGCCAAGGTTGCTCCAAAGGAACCAACCTTTACCTGTCCTGTGTGTCTGAACAAACTGGACAAGCCATCCACGACAAATTGCGGTCATATCTTCTGCGAGAAATGCATCCAGGCATGCCTCAAGGCTCAGAAGAAATGCCCTACTTGTAGGAAGAGTCTAGGGATCAAGAGCTTCCATCGTGTTTACCTCCCTACTCCTGCTGATTATGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAQQQKKNAHVPKFGNWDNGGNVPYTVYFENARKGKVAAAGKMFNPNDPVDNPEAFSSSIAAPSPSRAPPPPPSHHERAPSDAPPPPPPAPYAGGSPYHRHAAGGGETPPARRGGGRTSGGGGSSYSVEHSPSPSPLHPYSDSGSGSYGGGLVANSRAKGGGGGAPRGNETPTRGSAVPRFGDWDSNPASADGYTHIFNKVREEKQTGQAAGKPAAGLGKGGAAAAGHGNAAKRYHDDDFASTVIPNIIRIMSTASTARSRKRAHDGSRQKVDVINLETTAPVVNTGSQHEALILRGTRTSPIDVEALDDKRRSRKIMRRSVAVVDPEKDTGPGGYGVAGAIFSRGRNFQGAVHVICLSPDREEGTSKPKNVAQTSTTHAKVAPKEPTFTCPVCLNKLDKPSTTNCGHIFCEKCIQACLKAQKKCPTCRKSLGIKSFHRVYLPTPADYD</aaseq>

Gene Sequence

<dnaseqindica>1..6#1737..2243#2338..2553#4783..4986#5076..5145#5429..5529#5671..5916#ATGGCGGTAAGCTTTCTTTGCTCTTTCTTCTTTCTCTTCTGTTCTTGGGCATGGGCATACCTTGCAATTGCATGCGACCATGTTCTTCCATCGCTCTTTCTGCCACAGTTTACCGTTAGGCGTAGGCTAAGTTTGATCTGTCCATGGTTTTCTGGTTCAATATCTGAACCTGAAATTTCTGAAGGAACAGTTCTCACTTTCTTAATAACTTCAGAGTAACTTGTTTTTATCTGTCCATGGTTTTTGGATGCGAAATCTGAGCCTGGATTTTCTGAAAGAACCGTAACAGGATCACCACGATTTTGTTTCTTGTCATCCAGTGTTAGCTAGTTAATTAGTTGGAACACCGGTTTCATCGCTTGGAAAACAAAGTCCTCTGTTGTTGTGCTCTTGTTCTGCTTGAATCCACCTAGTTTGCTCAACTTGAATGGTATGAATAACTTATTGCTTGTGTGAACGAAGGAATATCCTTGACGTGTTCATCTGCAAGAAGTCTTTCTTGATGGTTGAGATGTATCTTTCCATCACATTAAGTTGTTTTTTTTTCTTTGTGAATAAACATTTAAGTTGTAGTATTGTCTCCATAGTATTCATACCACAATTAATCAAACTGCCATAGAAGATAGATGTTGTCTGCTTAACTCACTGGAATACGACGTCCTGGATAATCAATTGTTCTCCCTTAATCGATTACATTATTCAAAATCTGTTCTAACCTGAAGATTGAATTTGTATATAACCAAAACTGAAGAGATAAGGGATGCATCATGCATGATGCATCTGTGTCTCTTTGACTTGAAATTTCTCCCACCTTTTGTAATCTTAATCAAACGTAGGGTGTCAGCAAGGTAGACCTACCTTGCGCTGTCATTTCTCCAGAAGCTTTGACAAATTGGCACACAAAAGAGATTAATTGTCAGACCTGAACACCCAACCGCCGCATTAGCCCGGTCCTGTCTGGCCAGCCTGATTAATCAGTCCAAGTGGTGAAGCCACAGCATGTGAACGATTGATTAATTCCGATTAGAAAATCAGCACGTTCCATTTGATTAGTCCGGCCATATACATCAAATGTATGCAGTGTGTGTGCAATTGACCAGTTCCTGGTCTCCATTTTTCTTTTGCTAATTTTTTGCTGGTCAGACTGCTCATTTACAACCACTTGTAGTAGGCAGTAGTACATGATTCAGCAAGTCAGCTCTGTCAAGTTGGCATGTTCAGTAATGTTTACTTCAGCAATGTCCTTATGAGTATGACTTTTGAAAACAAAATCAAAATCTCAATATGTTTGATGAATTCGCACAGCTGTTTTTTTGTAGTTGTATATGGCTGCTTGTAGAAGTTGATCTGACATGCAAAAGAAAATGTTCTTTTTTAGGTTAAAATTGTGGCAGTGGTCATGTCAGCGATTTTTATAATTCTTAAGAAGACATCGTGATATACCATATTTTATAGTCTAATTTTTGTTTTACCATCTAGTATACTAAAACTGTATAGTAGTTACTGGGATTCAGGATCCACTATCTCAGTATACCTAAATTTCGGATCGGAAAAAAAATAAACATTAAACAAATTCTGATCGAATTTAAATACATTTTGCCACATACGCATTTTTTTTTTGAATTTTTCGTGCGAAATAGTTTCATGCCCGGGCCAAAAAATCCCCAAAATTGTGAGAAGGGGAAGAAAATGCATGGCGGCAATGGCTGATCATATATAGCTTTGCATTTATGCAGCAGCAGCAGAAGAAGAACGCGCACGTGCCGAAATTCGGCAACTGGGACAATGGCGGCAACGTGCCGTACACCGTCTACTTCGAGAACGCGCGCAAGGGCAAGGTCGCCGCCGCCGGCAAGATGTTCAACCCCAACGACCCCGTCGACAACCCGGAGGCCTTCTCCTCCTCCATCGCCGCGCCATCGCCGAGCCGAGCCCCTCCTCCTCCGCCGTCCCACCACGAGCGCGCCCCGAGCGACGCGCCGCCGCCGCCGCCGCCGGCCCCCTACGCCGGCGGCTCGCCGTACCACCGCCACGCCGCTGGTGGTGGCGAGACGCCGCCGGCAAGAAGAGGAGGCGGGCGGACAAGCGGCGGCGGCGGGTCGTCGTACAGCGTCGAGCACTCGCCGTCGCCGTCGCCGCTGCACCCCTACTCCGACAGCGGGAGCGGCAGCTACGGCGGCGGCCTCGTCGCCAACTCCCGCGCCAAGGGCGGCGGCGGCGGCGCCCCGCGCGGCAACGAGACAGTAAGCTAGCTTCCCTCCGCTCCGCTCGACCTCTCCGCCATTGATGACGCTTTTGCAAGCTTCGTGACCTTGTTGTTGTGATCGCCAATGGCAGCCGACGAGGGGGTCGGCGGTGCCGCGGTTCGGCGACTGGGACTCGAACCCGGCGTCGGCGGACGGCTACACGCACATCTTCAACAAGGTGAGGGAGGAGAAGCAGACCGGCCAGGCCGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACGGTGAGCCACTCCACCAACCAACCATTGCACATAGGGGCCTCATTTTTAGTTGCTTATATTTATCAGCCAAAATTTAAATTTTCAACCTTAAATTTAGCTGATTTTAAGATTTTTTATCAAAATTTATTTTTTAGCCTTTGCTTTTAAATCGCTAGAACACGTATATAAAAGTTTTATTAACAAATTATTTTTTGTTTGTAAATATAGTGTTTCACTTATTCCGCGAATAAGCGAAACGATAGCTCCGCTAGGTTCTTGATTTCTTTTACATTTCTGATCTCATTTGAGCTCTGCATTTTTTTTTAAATTTGCAGAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTCGAGGCTGTTATCAATGTACTTGTAAATTGCAGAGAATGGGATTTTCGTTTCCCCAGTGCGATTCATCAGCTTCGAAACTGCATTTGGTCATAGATTATTTATTTGGAAGTGGGGAAATATACATTACAGTATAGTTCATGCCTGCTGTAATGGTAGATTACGTATTGGATTGTTTGGTTCCTTCTGTACTGGATTTACATGCTTGTAATGGCAGGTTAAAGCTTGGGCTGTTTCTTGTTCTTATCGTCATTTAATTTGTCCCTTGTCAACACAGAAAGTCCATTATGCACGTATTAATCTATGAAACTAGATTTCTGGTAGATTTGGAGTTTTTTGTTTTTTGGATAGCTTATTATTGCTGAAGCTGGCAGTCTGCTGCAGAGCTCCCTTAATCTGAAGACTGATGAACGGTCGCATCACATGCACTCTGATCCTCAAAAGTTCTAGAAGCAATCTGTTCTTTTTCCTTCTAAATTTACTAAACAAAACAGTGTAAATTGAATTGCTTGAAACTATTATCATACAAAAAAGAAATGCACATACGGTGCGTACTGGATCAAGAACACTCAAAACCTAGGGGCTATTCAGATTGTAGCCAAAATAAACCTTACCAAATTTTGGCAAGTTGACAATATTACTAAAATTTTAGTAGAATTTCTTATATATTTACCAAAGTTTGGCAACAAACTAAATATAGACACTTTTTTGGTAATTTTATCTAAAAAAAATATAGTATGGTTGAAAATGGTATCAATCTAAACAGCCCCCAATCGGATGGCCTAGTGAGCGTAGCTAGTCCATCTGGATTCAAATCTAGTTTTACAGTTTTATCCGGCCCATCTACGTGTGTGGGCCGTGATTGAGGCCCATCAAAACGAGTACGAGACGAGGAGTGGTCAGCACCGGGGCCCACCTATCAGAAGCCCAGCGCGGGAGGAGAGGAAGAGGAGGGCGCCAAAGTCCACAGCGACTCCCCTTTCCTTCCGATCCGTCCCGAACTCGAAGCGAAACCCTAGCGAGTTTGCGCCGCGGTTCGTTTTGGTTGTTCGTTCGAGACCGATTCGGGTAAGGTTTCCCCCTCGCCAATTCACCCCTTCCGTTTATTAACTGCTCTGATGAGTTGCCTCATCTGATTCATCTGTTCTTTGCTCTGGGATTCCGCCGCGGAAGCAAGCTCGTCCGGTTTCCATCGGCGTCTGGGATCGGGCTCGCTAAGACTTTTCTTGATTTAGTAAGCTGATCCCCCTCAGTTCGTTGTGAATTGTGACGGATTCGGGAAAAATTCAGGCACTCTTGATCAGGGTTTGGGGTTTAGCAGTCTCGGTGAGCATTTGTTTCCCCCCAAATCATTCTTTCTTTATTGTTGTTGCGCATCTGTGTGTTGTGATAAGTTCTGCGAAATGTGATATAAAGTTATGTGTGTATAGATCGTAGAGAGCTGAGATTAGAGGATATCATTGTAATTGATATTTGACAGCACCTAAAAAAGAAGTTTTTTAAGTCGGCAGGAGCATGAGAATTGCCTGATTAGATGATCTTTACAGGTTCTTTATATACCACATACTTGAAATTTCCCAGTGCTTGCAGGCATTTCTCTTCTCGACTCTTGTTTTGCCAAAGTATTGTTGAATTGTTCCCTTCCTTCCAAATTTCCAGGGTTCTCAGTTTTGTTTTTTTCCCCCTCTTTTGCTCTTCTGGCGTGCCCAGGATCGCAATCTGCGTTTTTTTTGGTGCCTATCTATCTTTAATGCAATGATACGCAAATCTTGTGCATGTTGCCAAAAAATGGGCATTTCTTGTAGAAACTGTTAAGGGAATTAGGGTACTTAAGCTGAAGATTCAGCAATAAGTAATTGTGGCTCACTGATTTCCAGGTTATTCCAAATATCATAAGAATCATGAGTACTGCAAGTACTGCACGCTCTAGGAAGCGAGCCCATGATGGATCCAGACAAAAAGTTGATGTTATAAACTTGGAAACAACTGCTCCAGTGGTGAACACTGGGAGCCAGCATGAGGCTCTGATCCTTAGGGGTACACGGACCTCACCCATCGATGTTGAAGCTCTAGATGATAAAGTAAGCTTTTGCTTTCTTCTGTCTCCAATTAAGCGAATGAATAACTGAAACCTTTACAAGAAGCTGAAGCTGATGTTTCTTTTTGATAGAGGAGGAGCAGAAAAATTATGAGGCGCTCTGTGGCTGTAGTGGATCCGGAGAAGGATACTGGTCCGGGAGGTAAGTACATTACTTATGTTTGAACTCCACATAGCTTAGTCTAAAAGAACTATTTGGAAGTCTTGTGTTACTCAGAAACATTTGGATACTTCCAAGTGACATAAGAAATGTGCACCATTAATTCTAACCCATAGTTCTGTACTGTAGGTGAAACTGAAACTTGATAGTACATCGGTGTACTGTCTTATAGATTATTATTACAAGACACTACAACATATACAATAATTATGATTCATACCTCACAAATGTTCATCATGATTCCCTGTTTTCCCTGTTCCCCAAGGTTATGGCGTTGCTGGAGCTATATTTTCCCGGGGCAGAAATTTTCAGGGTGCTGTACATGTTATATGCCTTTCTCCAGATAGGGAAGAAGGGACCAGCAAGGTTGTTAATCTTTTTAAGTTGATCTTCTTTGTACTGTGATGATAATTGCAATTCCGCATTGGCTGGTGTATGTATATTGTTTTCTTAATGCTTAGTATTGTACTCCTACATGCAACTCATAATATGCTCTCACCTTTGCAGCCGAAAAATGTGGCCCAAACCAGTACGACGCATGCCAAGGTTGCTCCAAAGGAACCAACCTTTACCTGTCCTGTGTGTCTGAACAAACTGGACAAGCCATCCACGACAAATTGCGGTCATATCTTCTGCGAGAAATGCATCCAGGCATGCCTCAAGGCTCAGAAGAAATGCCCTACTTGTAGGAAGAGTCTAGGGATCAAGAGCTTCCATCGTGTTTACCTCCCTACTCCTGCTGATTATGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026620