Os06g0173000

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0173000| Description = Hypothetical protein| Version = NM_001063478.1 GI:115466687 GeneID:4340275| Length = 1738 bp| Definition = Oryza sa...")
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Gene Name

Os06g0173000

Description

Hypothetical protein

Version

NM_001063478.1 GI:115466687 GeneID:4340275

Length

1738 bp

Definition

Oryza sativa Japonica Group Os06g0173000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3685954..3687691

Sequence Coding Region

3685954..3686489,3686611..3686676,3686762..3686831,3686918..3687556

Expression

GEO Profiles:Os06g0173000

Genome Context

<gbrowseImage1> name=NC_008399:3685954..3687691 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3685954..3687691 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggaacaaaattgcgaagcgcttgaatgggcaaattacgccaaacttaaaaaaaattatctgcggcgcaggtgtccatgatgtactctatcagttcttctgctatccattttttgctttcctattgcctgggaggaaatctactctctgtggctctgaaagttcttctgagtcatacctttctttgacacatgacctagaggtggaagtggctattgaggtttatagatccatttgtgcaaactccaatcatggtccagaggctgatcacaaggttttcctggagagcttttgtggatttgttgtaagcataattgatgaaaacatctccctgttccaagccaacattgagtactgttcagagaagaagtttaaaaattgtgctatcctttctactcttggcgaactagttagcggattattagagaatggtcatattttgaactacgctatcaaagagccaacagaagcaagtgaagagtctgctggatatagccagcctagcatccttctgtgttgcttgaggcttgttagcaggtttatgggactgtcaactattgttatcaaagcaaatccaactacccaacaccagatcatgagcagggttttttcatctttatctgcgttcgctgggtatcttctgttgaagaaagatgttcttctattctttgagataattggagagcaactaactgaatgtctctctttatctggcacattataccgtgaaatgcaacatggggaaaccattaatcagattgagaaactctggctcaagatcatcatgtgcctaaagatgagcaagctcatcaatgattgttccttccttcaaaagcagcaaatgctacttcaagcggcagtcagtcacccacatcgtcccatttcggttgcaactacaccagcctggagagcatcaagatatgatatctcaaccttgcagcactcatcattctccctttctaaactggataaattgccaatggagagaagaaaagatcttactgacccttgcactcctcacaatgccatcgcgctcgaagaaatcgacattttgaggaagttcaaacacccaatttctgagttggagaagaatgatgaatctattaagatctctgtgggtctagggagaaagaggttgaagatcatgaagtactcaatgaagccaagggaacctggaaaaagtacagttcctcctggtaattttagctctaaaaaggatactgatgctgatgccttctcatcgcattacatggaaagcaaagcgtgtaggaaaccggaattaatacttgaaatgcttaaaagaaaaagatag</cdnaseq>

Protein Sequence

<aaseq>WNKIAKRLNGQITPNLKKIICGAGVHDVLYQFFCYPFFAFLLPG RKSTLCGSESSSESYLSLTHDLEVEVAIEVYRSICANSNHGPEADHKVFLESFCGFVV SIIDENISLFQANIEYCSEKKFKNCAILSTLGELVSGLLENGHILNYAIKEPTEASEE SAGYSQPSILLCCLRLVSRFMGLSTIVIKANPTTQHQIMSRVFSSLSAFAGYLLLKKD VLLFFEIIGEQLTECLSLSGTLYREMQHGETINQIEKLWLKIIMCLKMSKLINDCSFL QKQQMLLQAAVSHPHRPISVATTPAWRASRYDISTLQHSSFSLSKLDKLPMERRKDLT DPCTPHNAIALEEIDILRKFKHPISELEKNDESIKISVGLGRKRLKIMKYSMKPREPG KSTVPPGNFSSKKDTDADAFSSHYMESKACRKPELILEMLKRKR</aaseq>

Gene Sequence

<dnaseqindica>1..536#658..723#809..878#965..1603#tggaacaaaattgcgaagcgcttgaatgggcaaattacgccaaacttaaaaaaaattatctgcggcgcaggtgtccatgatgtactctatcagttcttctgctatccattttttgctttcctattgcctgggaggaaatctactctctgtggctctgaaagttcttctgagtcatacctttctttgacacatgacctagaggtggaagtggctattgaggtttatagatccatttgtgcaaactccaatcatggtccagaggctgatcacaaggttttcctggagagcttttgtggatttgttgtaagcataattgatgaaaacatctccctgttccaagccaacattgagtactgttcagagaagaagtttaaaaattgtgctatcctttctactcttggcgaactagttagcggattattagagaatggtcatattttgaactacgctatcaaagagccaacagaagcaagtgaagagtctgctggatatagccagcctagcatccttctgtgttgcttgaggcttgttagcaggtatgttgaattaaacttacagaggaaatactttgtaatctgtcctgtctgacatgaaaggataaattttgatgatttcagaatgtttaagtaatccccaacaaattcatggcaaatgcaggtttatgggactgtcaactattgttatcaaagcaaatccaactacccaacaccagatcatgagcaggtaaacatctggatttaatcattagcaggaatctgctttagtttggattttatattattcttctcttactttggttatatgtcagggttttttcatctttatctgcgttcgctgggtatcttctgttgaagaaagatgttcttctattctttgaggtttgtgaaatctttgtacaagtacaaggctcatggcatctttcatgctagttgcactaacaaaacttcaactcatccccttgcagataattggagagcaactaactgaatgtctctctttatctggcacattataccgtgaaatgcaacatggggaaaccattaatcagattgagaaactctggctcaagatcatcatgtgcctaaagatgagcaagctcatcaatgattgttccttccttcaaaagcagcaaatgctacttcaagcggcagtcagtcacccacatcgtcccatttcggttgcaactacaccagcctggagagcatcaagatatgatatctcaaccttgcagcactcatcattctccctttctaaactggataaattgccaatggagagaagaaaagatcttactgacccttgcactcctcacaatgccatcgcgctcgaagaaatcgacattttgaggaagttcaaacacccaatttctgagttggagaagaatgatgaatctattaagatctctgtgggtctagggagaaagaggttgaagatcatgaagtactcaatgaagccaagggaacctggaaaaagtacagttcctcctggtaattttagctctaaaaaggatactgatgctgatgccttctcatcgcattacatggaaagcaaagcgtgtaggaaaccggaattaatacttgaaatgcttaaaagaaaaagatagatatgccacgaacatatttgcttgtatgatcgtctaaaaaaagttgtattcccgaaaaaagtttataagactgctgtacatttgtatacagttatactaaattggttgttggaatagatacactttgactttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0173000, RefSeq:Os06g0173000