Os09g0491836

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0491836| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001188992.1 GI:297727114 GeneID:9270429| Length = 3...")
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Gene Name

Os09g0491836

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001188992.1 GI:297727114 GeneID:9270429

Length

3105 bp

Definition

Oryza sativa Japonica Group Os09g0491836, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19669362..19672466

Sequence Coding Region

19671672..19671869,19672001..19672170,19672269..19672380

Expression

GEO Profiles:Os09g0491836

Genome Context

<gbrowseImage1> name=NC_008402:19669362..19672466 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19669362..19672466 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgcggcgcgtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctctcctgcggctacttcttccacggcaccgtccgcaacccagatgatcccaagaacgcgtttctgaagcagctagagaatgccacggagaatctgcagctgttcaaggccgacgtgctcgacggcggctcgctgacggcggcgttcgccggctgcgagggcgtcttccatccggccactccggtgccggaagaacagatggttgatccagagaaggagatgatggctcctgctgtgaaaggcaccaggaatatgctggaggcttgctctgccgcaggtgttcagaaactcgtcgtggtctcctccattgctgctgtattctttaacccgagctggcctcatgacaggccaaaagatgagacttcttggtcagacaagaagctctgcatggaaactgaggtcagaaattaa</cdnaseq>

Protein Sequence

<aaseq>MPPRRVCVTGAGGFIGSWLVNLLLSCGYFFHGTVRNPDDPKNAF LKQLENATENLQLFKADVLDGGSLTAAFAGCEGVFHPATPVPEEQMVDPEKEMMAPAV KGTRNMLEACSAAGVQKLVVVSSIAAVFFNPSWPHDRPKDETSWSDKKLCMETEVRN</aaseq>

Gene Sequence

<dnaseqindica>598..795#297..466#87..198#tgcaacttgcaaccaaattctgtggctgcgtgcgtacgaaggggcttcgattccaatctgatcagagcggcaaagttcaaccggagatgccgccgcggcgcgtgtgcgtcaccggcgccggcgggttcatcggctcgtggctcgtcaatctcctcctctcctgcggctacttcttccacggcaccgtccgcaacccaggtttgctgcatcttgctttaaactaggaagtatatcatcttggtgtgattaattagatgtgtttttctttttaatctcctcttgttttgctgttccagatgatcccaagaacgcgtttctgaagcagctagagaatgccacggagaatctgcagctgttcaaggccgacgtgctcgacggcggctcgctgacggcggcgttcgccggctgcgagggcgtcttccatccggccactccggtgccggaagaacagatggttgatccagaggcaagtatatatctatgcacacaccatctgaacaaccagaaacctctcgtgattttgctttctgcaaatctgcatatctctgctgctgctgatgatgatgatgatgattctaaacacgatttcgaattcagaaggagatgatggctcctgctgtgaaaggcaccaggaatatgctggaggcttgctctgccgcaggtgttcagaaactcgtcgtggtctcctccattgctgctgtattctttaacccgagctggcctcatgacaggccaaaagatgagacttcttggtcagacaagaagctctgcatggaaactgaggtcagaaattaatttgccagattaagcaacttaaggcatccatcaaatgatcaaatccccatgttaacacatgaatgtcacctgaaattctttagttagacatgtccagtcctctcttcatgtcaccttcatcatactctcttctcttcttcgtaattataagtcattttgatatttttcttagttaagctttgttaagtttgatcaaatttatagaaaaatttagcaatacataaaacaccaaattagtttcattaaatctatcatttggatgtattttgataatatgtttgttttgtgttgaaaattatagcatagcttcttataaatttgatcgagcgttgttacagtacagcggtcggtaccggtaccgcccgataccaaaatcctgaccgttggatctggcccgatccaacggctggtagagtttggtaccgggctgtaccaattctgtccctgtgcagtatcacgcggagaactgaggtggaagggcaaaaacgtaactttgcgtataataaccggatcgggagggatggacgggcagctcgaaccctagaagcgttgggattctcgatcgatcgacgccgccgccgcctcctggatcgacgccgccgactcttggaggtgaactcagccgtctctgggaacgacgacatcgacgccgccgcctccgggaaggacgacatcgacgccgccaccgccgccgggaacgacgagttcgctgctgccgtcgactgcttcaacgtcgccgccgctaccgccgcagggaaggacgacatcgacgccgctgccgccgagaaggacgacatcgacgccgccgccaccgggaacgacgagttcgctaccgccgccgcttgcttcaacgccgctgccgctgggaaggacgagttcgatgccgccgcagcggcctacttcaacgcatgccggaatccgccgctcgccgccacttgattgcttcaacgcatggccggcgccactctcttccgatcctacccatgccgaaacgaacggcagatgcgtactggtaccgagcagtaccagtaccgagcggtacaatttgctggaccataaaaaatcttaatttgatcaaactttaataagtttgagtaaaaaaaaatcaaaacgactcataatatgtaacagaggagggtgtatttgttttttggcgagcattattaatcagttcttaattaggactaatactctcttgccaaaactacatgtgttttttggcgagcattaattaatcagttctctacatgtgttggcagaactggtactctcttgccaaaactgaaggtgaagagatggccctagaatacggaaacaggaatggtctgcatgttgttacggtttgccctggaattgtttttggcccaatgttgcagactgtgcaactcaacactaccaccaaagctctcctctatatcatccaaggttgcatgattctcgtttttttttctactgatagtagaactcataaatcagtaatcaagattattttcgttgatgataatactagtagtagaatacgactaacaaacataacagtgcaggaggccatggccctgatacaatgaacaacaaattcttgtccatggtggatgtccgtgatgtcgctgatgctctacttctgcatatgaagaggtagggccatctgagcgatacatctgcgcactagaacaaatggacctgaaggatttgttgagtttgatgaagaccatgtaccctaactacaattatgtagacaagtaagtcattatctaaagaaaatgtacaaaagtaggtgcaatattcctatatatggctgtgtcaacatcaacctattattccagagcttatcttaatttgtactggtgttttctactgcaaacatgaacacggttaatttgaacagctcatctatcgttcgacagaatggttgatttggattacaaggccgaagtgacatcggagaaactgaagaatctgggctggaaaccaaggaaacgggaggagacattcgcggacagcatcgagttcttcgagaaggcaggccttctggatggacaacctttccggcttccctatctctaccgtatggctgcctaggaatgaactgaaaatatgtgtaataataagttggcatcaggcccgattatcagctacttcctccgtttcataatataagtctttctagcattgtccacattaatatagatgttaataaatctaggcatatatgtgtctagattcattaacatctatacgaatatgagcaatgctagaaagtcttatattatgaaacggagggacaaattaatacatcctctgtttcacatt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0491836, RefSeq:Os09g0491836