Os06g0174350

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0174350| Description = Conserved hypothetical protein| Version = NM_001187698.1 GI:297724526 GeneID:9270574| Length = 2969 bp| Definition ...")
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Gene Name

Os06g0174350

Description

Conserved hypothetical protein

Version

NM_001187698.1 GI:297724526 GeneID:9270574

Length

2969 bp

Definition

Oryza sativa Japonica Group Os06g0174350, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3761944..3764912

Sequence Coding Region

3761999..3762336,3763313..3763598,3764022..3764912

Expression

GEO Profiles:Os06g0174350

Genome Context

<gbrowseImage1> name=NC_008399:3761944..3764912 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3761944..3764912 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtggaggaggaagggaggtgggagccgacggcggcggcggcggaggaggaggagatgggggtggaggcggaggaagcgatggaagacggggaggtcgagggagaagttggtcagcagcagcaggaggaggaggggaatggagacgcgggaaagagcgaggagcacggcagcgcgggggggcgtatggtgtggaagaagaagcatcaccaccaccaccagccgcggacgcccgtggcggcggagagccgcgccacctggagggggggcaagggcagcgggaaggggagaggaggaggaggaggaggaggggggtttcaccactgcccttggaatctgcaaccggacaatctgaacagatttaacaaaccaggggtatatggtggtgctattatcatctgcaatcacatgactaagagggggttcttcgagaagaaactttttgggcttccaggctacgctgcaactttcataaagaagatcagagttggtatgcttctctttgtgtttgagcttggggaaagaaaactttatggggtatttgaagctacctccaatggagcactggacatccttccaaatgcatttacttctttgaggaagccccgaccagcccaggttttaaatctggtgcacctgtttgcttcaaagaggattgaactgcagccataccagaaaccaaaatctagagttatatatgattacaagatctctctcgctcatcttggccgagagttcagtcctcgcactcataacaagaccttttctagccattcgtcttccacgttttgcaataacagattctcattgccacgcagttcttacttgtacaccaaacagaatgctaagcatgatgcttgcaaatatgaatctcctttgcactctccacttaagtctgtgatcttcaaagcaccagatgtcaaaggagaaagcttagagccaaatcctgattatataccacttgagctagatgattctaagtctgacagtgatgcagatccatcagatagtttggaaactgtaagcttctatccaacactagagggctgcatcagctatgaggatcaagatctcaaacctttcaatggaaaattcaatggcgatgatgggcatcattcacatgtgctgattcgagggctcaattctgaatgtgaaacagatcgaaacagtgttttttctcgcaatgtgaaagagaggcaatcaagcttggccaagggcggcaaggggtgcaaacgcaaggcaattgtcgagtttgatgagcaatcatccccaaggagaggttgtaccatgaaaagggtttcattcagtttctctggtgaagaaatttcagttacttctgagaaatcattgcacaggcctactgcatttgctgaactacctaacacaagggaatcatctgcggaagaaggaaagcaagaagtcggttgcgtggttcaaaaggctcggagcaagggggaagatgtttcagcaaagatcaagctgatgggcctatccttgcctgaagcactt</cdnaseq>

Protein Sequence

<aaseq>MAAVEEEGRWEPTAAAAEEEEMGVEAEEAMEDGEVEGEVGQQQQ EEEGNGDAGKSEEHGSAGGRMVWKKKHHHHHQPRTPVAAESRATWRGGKGSGKGRGGG GGGGGFHHCPWNLQPDNLNRFNKPGVYGGAIIICNHMTKRGFFEKKLFGLPGYAATFI KKIRVGMLLFVFELGERKLYGVFEATSNGALDILPNAFTSLRKPRPAQVLNLVHLFAS KRIELQPYQKPKSRVIYDYKISLAHLGREFSPRTHNKTFSSHSSSTFCNNRFSLPRSS YLYTKQNAKHDACKYESPLHSPLKSVIFKAPDVKGESLEPNPDYIPLELDDSKSDSDA DPSDSLETVSFYPTLEGCISYEDQDLKPFNGKFNGDDGHHSHVLIRGLNSECETDRNS VFSRNVKERQSSLAKGGKGCKRKAIVEFDEQSSPRRGCTMKRVSFSFSGEEISVTSEK SLHRPTAFAELPNTRESSAEEGKQEVGCVVQKARSKGEDVSAKIKLMGLSLPEAL</aaseq>

Gene Sequence

<dnaseqindica>56..393#1370..1655#2079..2969#agcggctttagcacgcgcgcagacagcagcacacgcgagcggagaggagacggggatggcggcggtggaggaggaagggaggtgggagccgacggcggcggcggcggaggaggaggagatgggggtggaggcggaggaagcgatggaagacggggaggtcgagggagaagttggtcagcagcagcaggaggaggaggggaatggagacgcgggaaagagcgaggagcacggcagcgcgggggggcgtatggtgtggaagaagaagcatcaccaccaccaccagccgcggacgcccgtggcggcggagagccgcgccacctggagggggggcaagggcagcgggaaggggagaggaggaggaggaggaggaggggggtttcaccactgcccttggtatggcgcccagtaatagtagccctaggcgccatctaatcctagttctttcttgattcagcgcgttgttggatgcatcctgtttatagtttactagtttatgcttcgtaggtgatatcgatgctttgcttcaattagatgcttcttgacttcttgtggtggagaaaagtggctagcaactcactatgttttagtatcggttttggttagtgctgcatccaggcaaatatatgtgggcaacacaatgcaccaccacattgggttgtggaatcacgggtgtctgcccctagggggatcaaaattgatggagattgcgcggattctataattagttggtgtccactttacgatttcttcgtttgtgatgcatccatgcaagtatatggtggcttgtggaaattttatcatagatcatacaggtcgcattaatgtgtttagttggatcatgcagcgaatttggagacttagggtctgacagtagcctgtacccgtagaagaggctggacaccaggatctagggaggttttggttccattttgatgatttttctgtaattaatatgaggtgaatagtttccatcttaattactggataaattgtaacacatcgttcttcatttttgtatttttccttttcagtttgtatgcctgctttcagctttcttgcaacatctaattttggagactgagaagcactagtatagtagtagctgtacctgattaatgtttgttgtataatttctgaggtacttcttagaaccttctatgctttttattttgttaatttggccactgttggcttccggtcccgatcattgttgatttgttttaaattgccaagtctaaatgtgagtgatttgctcgtcgttactgccatattttttggacaatagcaactgtaagtgttctttgaatataccaggtctccattagtgatgctttgcattgcctcaatatcttctctttcatttttaaaggaatctgcaaccggacaatctgaacagatttaacaaaccaggggtatatggtggtgctattatcatctgcaatcacatgactaagagggggttcttcgagaagaaactttttgggcttccaggctacgctgcaactttcataaagaagatcagagttggtatgcttctctttgtgtttgagcttggggaaagaaaactttatggggtatttgaagctacctccaatggagcactggacatccttccaaatgcatttacttctttgaggaagccccgaccagcccaggtaagtttgctttagttattggctacgctctccaagtttcatgtcctcatagtctgggtcatgttctttccgatgtttaattgttgcttcttgatttcctcttggtaagtatttccagtgatgttactaaggactgcttttacagttaaaatgcagagaaacattgataacggttattttatttttaccctgtggatgaaattcaggttctcttcagaagaatttggttctgtaagcccctcgctgaaactgagttttctagtgccatcaagggaaactgtctctatccccaaatgtccttctttggtatatcgtaccaacaggtttgctatgtcaagttttgaaatttgtgatactgacgtgattatcttttagtgtctctagaacttgcttactgctaattcaagttttttcgtagtataggttttaaatctggtgcacctgtttgcttcaaagaggattgaactgcagccataccagaaaccaaaatctagagttatatatgattacaagatctctctcgctcatcttggccgagagttcagtcctcgcactcataacaagaccttttctagccattcgtcttccacgttttgcaataacagattctcattgccacgcagttcttacttgtacaccaaacagaatgctaagcatgatgcttgcaaatatgaatctcctttgcactctccacttaagtctgtgatcttcaaagcaccagatgtcaaaggagaaagcttagagccaaatcctgattatataccacttgagctagatgattctaagtctgacagtgatgcagatccatcagatagtttggaaactgtaagcttctatccaacactagagggctgcatcagctatgaggatcaagatctcaaacctttcaatggaaaattcaatggcgatgatgggcatcattcacatgtgctgattcgagggctcaattctgaatgtgaaacagatcgaaacagtgttttttctcgcaatgtgaaagagaggcaatcaagcttggccaagggcggcaaggggtgcaaacgcaaggcaattgtcgagtttgatgagcaatcatccccaaggagaggttgtaccatgaaaagggtttcattcagtttctctggtgaagaaatttcagttacttctgagaaatcattgcacaggcctactgcatttgctgaactacctaacacaagggaatcatctgcggaagaaggaaagcaagaagtcggttgcgtggttcaaaaggctcggagcaagggggaagatgtttcagcaaagatcaagctgatgggcctatccttgcctgaagcactt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0174350, RefSeq:Os06g0174350