Os06g0176200

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0176200| Description = Glycosyl transferase, family 31 protein| Version = NM_001063489.1 GI:115466709 GeneID:4340286| Length = 3979 bp| De...")
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Gene Name

Os06g0176200

Description

Glycosyl transferase, family 31 protein

Version

NM_001063489.1 GI:115466709 GeneID:4340286

Length

3979 bp

Definition

Oryza sativa Japonica Group Os06g0176200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3839733..3843711

Sequence Coding Region

3839816..3839970,3840059..3840122,3840212..3840261,3840346..3840536,3840720..3840780
,3840912..3840984,3841317..3841440,3841521..3841608,3842043..3842093
,3842701..3842772,3843266..3843378,3843471..3843493

Expression

GEO Profiles:Os06g0176200

Genome Context

<gbrowseImage1> name=NC_008399:3839733..3843711 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3839733..3843711 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagcccccctcctcctcctccgcctccgcctccgccgccctctcctcggggagggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggcaatcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcattggaattgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctgtgggggaatggaactgctactggtagttctgacaagaagaagctccttgctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctcatggatgccgagaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcggagtgcaaatcgaggtgatagcttggaccgcaacatcgatgatgaaaatcgtcggacgaaagatttcttgattcttgaaagtcatgaggaagctgcagaggagttaccaagcaaagttaagtttttcttcagtgcagcaattgaagcttgggacgcagagttctatgtgaaagtcgatgacaacattaaccttgacctggctggattaattgagatgcttgaagcccgtcgaggtagccaaggactgtacatgggttgcatgaaatcaggaggtgttgtaagtgaagagggtcaacaatggtatgaacctgaatggtggaagtttggagattcaaaaacgtattttcgccatgcttccggtgctttgtttatcctctctaacaatttggcacgctacattaacataaacagtgcatcgctacagagctatgcccatgatgacatatcagtaggttcatggatgatggggctgaatactacttatgttgatgacgaccgtttgtgctgcggcagttctagacaagagaaagtatgttcccacgcatga</cdnaseq>

Protein Sequence

<aaseq>METLASAMRRENRRFKPPSSSSASASAALSSGRVPLVMAFLSCL AWLYVAGRLWQDAQTRMILSGLLEKSSGNLPKVLSVEDKLRNLGCIGIGRKIAEAEMD LTKAKSEGYLWGNGTATGSSDKKKLLAVIGVYTGFGSRLKRNTFRGSWMPRGDALKKL EEKGVVIRFVIGRSANRGDSLDRNIDDENRRTKDFLILESHEEAAEELPSKVKFFFSA AIEAWDAEFYVKVDDNINLDLAGLIEMLEARRGSQGLYMGCMKSGGVVSEEGQQWYEP EWWKFGDSKTYFRHASGALFILSNNLARYININSASLQSYAHDDISVGSWMMGLNTTY VDDDRLCCGSSRQEKVCSHA</aaseq>

Gene Sequence

<dnaseqindica>84..238#327..390#480..529#614..804#988..1048#1180..1252#1585..1708#1789..1876#2311..2361#2969..3040#3534..3646#3739..3761#gagctgcagtgtgtccgaagcttttcttctctaccagcggcagcggcggctggtagggaggaggagatcgccaccagatcgccatggagacgctggcgagcgccatgcggcgggagaaccgccgcttcaagcccccctcctcctcctccgcctccgcctccgccgccctctcctcggggagggtccccctcgtcatggccttcctctcctgcctcgcgtggctctacgtcgccggccggtacgtacgcgcgcccgcgcgctcagatccggggggaatttccgtggagttttctgattgtttcgttgattggattttttttttgcaggctgtggcaggacgcgcagacgcggatgatcctgtctggtctcctcgagaagagctccggcaatgtgcggatctctccccctctccacccacttctcgttttttttttccgcttgatttgtcagttcgtgtgatggtatcgcctaaattgcagcttccgaaggtgctgtcggtggaggacaagctgaggaatctaggatgcatgtaattcccccctctctctctctgaagaggaattcagaattcagaattttagttgctgatttgaaatgggttgtttggtggcagtggaattgggaggaagattgcggaggcagaaatggaccttacaaaggcgaagagcgaggggtatctgtgggggaatggaactgctactggtagttctgacaagaagaagctccttgctgttattggagtttacactggttttggttcccggctcaagaggaacaccttccgtggctcatggatgccgagaggttcgctgttcttgctcttttagtttccagtttacggcgataaaatgtgtgcgccctgataacatttggttggaatgcagcttcatttttttttctaatagctattgctgatgcaaactatgttacttataaggtttcaactacaggagtataattgttcttttacctcactgtaaatttcaggtgatgctctgaagaagcttgaggagaagggtgtggtcattcgttttgtcattggtcggaggttttattctggatccatatctcttatatgtagcatctctagcaccttagacaatcattcgccccatatcattctcaggcttttcttcatgtttagttttcctactgaaattgttctgtttggtccttcagtgcaaatcgaggtgatagcttggaccgcaacatcgatgatgaaaatcgtcggacgaaagatttcttgattcttgtaaggatctaataacatttaatatcatttttccaatttgtccttcacaaaaaattagtactgtagtacatgcagaagacttttggctttgcttggttgttttctggcatggaagactatcttacattctcgtccgtattgggccttcaattcagtacctattttaagttatctcactgtcctgattcatctaaatgtcggtttttaatttgacatttggatatacagcttagatcaaaaccatttttgtgacattgtcaaatcttgaacaaactgcttgcactttatggagaacagaatgtgacataaatagtcaataaattgtcacacaggaaagtcatgaggaagctgcagaggagttaccaagcaaagttaagtttttcttcagtgcagcaattgaagcttgggacgcagagttctatgtgaaagtcgatgacaacattaaccttgacctgggtaattccttttctgttgaaacattacacctatggcttatttcggcttaatgttttgactcattacaatctatatattagctggattaattgagatgcttgaagcccgtcgaggtagccaaggactgtacatgggttgcatgaaatcaggaggtgttgtaagtgaagagtatgtgctttcattcccatcatcagtaggtttttatttatttagattttagacaacatgcatggcatatgttaacaccaactagaccatccatttcataagaggtaccatttgttttccttgcggatccatttagcagtgatgcttccatgctgacatccttccatctttgaaagctatgtaaatgtagtggaatgcattgagcatctgaaacgtttggtccaatcaaggaatcatagcttttgaattgcttagtcccattatttaccttaggtgctaccattgcttgatatcgagaaaacatgtaccttgcacactcttaattgcattgcatcatttatatattcagggataatatttcattcagtacattggattgctttgccctttgttaacccgtcattgaagccacttgataccaacttcaatttcaggggtcaacaatggtatgaacctgaatggtggaagtttggagattcaaaaacgtgagtaaactaacatattcaaggtccttgccatttgtctattatcctaatattcatcttagtgttgggtgattagcaataattctgtgtctagtggtgttcttacatgttttatgggcattattaatgaagcaccgatctcatgttctttcttagtatttggatttctgagtctaatgctacattgaggctacaaacatttcaacctcctgatagtgagtttcagccttcaatgcaaacctaagaatgattttttttttcatattaccaactactcgtataaccttgcatggcttgcagcggatgatgtcattataactactttttcatgctaatagcggtttctccttgattcacaaatggtttacgagtcttaaagatctggtgaagcccatctgttttatatttagacttaatttgcattgtgcttgtaatttctatttgtttggtgaaggaatacgcctagtttaaatagatgtgtttcctgggtgatactagtatctatgagaagtgttctctgctgtttcttcagcgttttcattctctggctccttcaactttctagtatatcactttttttccgttcactgtgatttttaattctcaggtattttcgccatgcttccggtgctttgtttatcctctctaacaatttggcacgctacattaacataaacaggtaagtggtgcgcatccacctgttttatctttgagtcatgctaagctaaaccagttttggtgaccaaccaggcccctctgagcaattgcagtgcatcagttcaattaatacagaataaatgttgcaattaggatgatgttttcttggtggtcaaacgacaaattagttttttgttacatgagtcttctcctgtatatgtgatttacagaaaacaggctatattcgctggatttcatataagttactaatactgtctttagcatttatgaattaataaccggccactgaaatgctgttctgactaactgatatataaatgttagccatctgccatctatttgatggtcttgatgatgcaggaacactgtccagatgttctttgtcaataatcaataatacaacagtaaccaattgatatctctagtcaatataggagtatatgcagtcaaaatttgaccgaaatttgagcaatttgtttctcttcgatatgcagtgcatcgctacagagctatgcccatgatgacatatcagtaggttcatggatgatggggctgaatactacttatgttgatgacgaccgtttgtgctgcggcagttctagacaaggtaaaagctcgcctcctgaatccattatcctaccctggacaattcatggcggtacttctatgctaatgctgtaattctgctgccgtatgcagagaaagtatgttcccacgcatgagttagcagcacgcatggttatgacggtggtgtcctgatgaagaggtgacgctgtatattttgccattttgtatacaccaagcggcttctggaatgaaaaatagatacatcatttcaaacgctgctttatccgatcagtatacttaaatacaagtgtaggggaactagttgacaaaaactataaaagcgctgagcttatttttggtggagcttcctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0176200, RefSeq:Os06g0176200