Os06g0177700

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Revision as of 09:06, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0177700| Description = 2OG-Fe(II) oxygenase domain containing protein| Version = NM_001063495.2 GI:297605284 GeneID:4340292| Length = 2538 ...")
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Gene Name

Os06g0177700

Description

2OG-Fe(II) oxygenase domain containing protein

Version

NM_001063495.2 GI:297605284 GeneID:4340292

Length

2538 bp

Definition

Oryza sativa Japonica Group Os06g0177700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3886856..3889393

Sequence Coding Region

3886856..3886997,3888150..3888409,3888518..3888777,3888976..3889303,3889364..3889393

Expression

GEO Profiles:Os06g0177700

Genome Context

<gbrowseImage1> name=NC_008399:3886856..3889393 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3886856..3889393 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaatgaggagcttcgtcggagatggaggtcgggtcggggggcttcggcggcggcggcaggtggtggccgtgtgggactatggaggcggcggcggcggcggcggcgagcaaccgattccatttcgcggcaatggcggcgtcctgagacagtacctgagctacatccgtatggaagggagcatggaggatgtgagatcaacactacttgtgcaggagcttgccggcatgagaagcaaatctgtgccaagacagtacattgtgcaacaagaagaccaaccgaccattgcagccactgcatcattccccattgttgaccttggtcgcctgtcccaaccagatggtgatgccaatgaggcggtgaaactccggcaggcgatggagtcttggggccttttcatggtaactaaccatggcatagaagatgctctgatggataacgtgatgaatgtgtcaagagagttttttcaacagcatcttggagagaagcaaaaatacaccaacttgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtgaaatctgatacccaaatcctggattggttggatcgattgtatctgaaagtagatccagcagacgagagaaatctttccgtttggcccaagcatcctgaatctttcagggatgttctggatgagtttctcataaaatgtgatggagttaaaaacagtctccttccatcaatggcaaagctcttgaaactcaacgaggattactttgtcagacaattctctgacaggcctaccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggcatgaagcctcattctgatgcaaccattcttacaattcttatggttgataacgacgttggtgggctacaagttcttaaagatggtgtctggtatgatgtcccaactaaacctcacaccttgctgatcaacttaggagatcacatggagctcttgctaaaactcactgtctcactgtga</cdnaseq>

Protein Sequence

<aaseq>MAMRSFVGDGGRVGGLRRRRQVVAVWDYGGGGGGGGEQPIPFRG NGGVLRQYLSYIRMEGSMEDVRSTLLVQELAGMRSKSVPRQYIVQQEDQPTIAATASF PIVDLGRLSQPDGDANEAVKLRQAMESWGLFMVTNHGIEDALMDNVMNVSREFFQQHL GEKQKYTNLIDGKHFQLEGYGNDQVKSDTQILDWLDRLYLKVDPADERNLSVWPKHPE SFRDVLDEFLIKCDGVKNSLLPSMAKLLKLNEDYFVRQFSDRPTTIARFNYYPQCPRP DLVYGMKPHSDATILTILMVDNDVGGLQVLKDGVWYDVPTKPHTLLINLGDHMELLLK LTVSL</aaseq>

Gene Sequence

<dnaseqindica>1..142#1295..1554#1663..1922#2121..2448#2509..2538#atggcaatgaggagcttcgtcggagatggaggtcgggtcggggggcttcggcggcggcggcaggtggtggccgtgtgggactatggaggcggcggcggcggcggcggcgagcaaccgattccatttcgcggcaatggcggcggtgaccggaggaggaggcgcgacgaggctacttcctgcgggttgcctcgatcccatcttcttacgcagatagggaatcggggcggataggtttgtgccaaagcagcttcggttaaattttttgttctttgaaaagtttgggggaaatttatttgggattagtactgtgcgaatgtgcaatgttttcaggattgattttgtgcaatccaaaaaacaggaagaaaaatcccgtaggaacaagaatcgttcgtttttttttaaaaaaaaaacagcacacggtattagggttccttgcatagaatttgatatgaagcatgccactttcaaagtagtagaagatgaacaagattgccatgaactataccactttcaaataaaaaagaaacaatattgtcatgaagtacaccactttcaaattaaaaagaaacaagatgtcatagaatttgatgtgaaatacgccacttccaaataaaaaagaagcgatattgccaggttcagttaatatgctccttcaagatgttaagttattctggaaaggacgttatcacaagcttaaatttaagggcctgtgctgtgcatcatcggttgctcaacctctcaagttgaagttggcatgttgtatgttgtgtaacacatggagtggttttctgattcacatggtatattgaatctttattcttctaggtgcttatatttttcattgtccggcaaaagtatgccgcccaaattaagaccaaggagaggttacaagtaataaataaacaaacaaggttgctgtgccaccagaaattagcccaactacctaaggatagaacaaacagcctgccaactccaggctagtacacagctgcgctctaggtgcttatattgaagttagggaatcagatgttgagcttgaatttaaatcttaattgtcagccactattgggcagttcctaactctgctccataaatgtcaaattgccttttttttttggttaattcagcaatttggttgcaacttacagcatttttttataccaggtataaattgttttcattacatgaccacttgtgcaacaatggcagtatttttactcttttttcgtacatggtctcagactcatatatagtaacttctccgtatcaactcaacagcattgaacaacctaagtcctgagacagtacctgagctacatccgtatggaagggagcatggaggatgtgagatcaacactacttgtgcaggagcttgccggcatgagaagcaaatctgtgccaagacagtacattgtgcaacaagaagaccaaccgaccattgcagccactgcatcattccccattgttgaccttggtcgcctgtcccaaccagatggtgatgccaatgaggcggtgaaactccggcaggcgatggagtcttggggccttttcatggtaataagtagtcagtgtacctttgatagatttttgttgaactgccttggcttctttaaataacatgatgtcgtggcttatattctatatctgcaattgtgttctcaggtaactaaccatggcatagaagatgctctgatggataacgtgatgaatgtgtcaagagagttttttcaacagcatcttggagagaagcaaaaatacaccaacttgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtgaaatctgatacccaaatcctggattggttggatcgattgtatctgaaagtagatccagcagacgagagaaatctttccgtttggcccaagcatcctgaatctttcaggtaatatcacaaacacagtgtcagagatgttttacgatttgtttacggcgatggtaaacaacttataaggcctagtttatggttgcaacgtgtcacaaaaatttagtactccctctgtcccaaaatttatagttcaaattatgtcaataaaacactttcgccagtaccaatccattatgcgaattgactcttatgtagggatgttctggatgagtttctcataaaatgtgatggagttaaaaacagtctccttccatcaatggcaaagctcttgaaactcaacgaggattactttgtcagacaattctctgacaggcctaccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggcatgaagcctcattctgatgcaaccattcttacaattcttatggttgataacgacgttggtgggctacaagttcttaaagatggtgtctggtatgatgtcccaactaaacctcacaccttgctgatcaacttaggagatcacatggaggtaaatatatctgtccacgaatgctgtttttcttgtcaccattgcatcatgctatcttagctcttgctaaaactcactgtctcactgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0177700, RefSeq:Os06g0177700