Os09g0491868

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0491868| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001188994.1 GI:297727118 GeneID:9267816| Length = 5...")
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Gene Name

Os09g0491868

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001188994.1 GI:297727118 GeneID:9267816

Length

5414 bp

Definition

Oryza sativa Japonica Group Os09g0491868, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19682391..19687804

Sequence Coding Region

19682391..19682580,19682871..19683046,19684918..19685052,19685966..19686151,19687321..19687472
,19687684..19687804

Expression

GEO Profiles:Os09g0491868

Genome Context

<gbrowseImage1> name=NC_008402:19682391..19687804 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19682391..19687804 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgccggcgccgccgcgcgtgtgcgtcaccggaggcggcgggttcatcgcctcctggctcgtcaagctgctcctctcccgtggctacgccgtccacgccaccctccgcgacccatgtgatcccaagaacgccaatctggagcggcttcaggacgcgtcccaggcggccccggcgaatctgcggctgttcaccgccgacgtgctcgacctcgacgcgctaacgcacgcggttcagggctgcgacggcgtcttccacctcgcgactccgtcagaagtgattgatcctgctgtgaagggaaccttgaatgtgctgaaggcttgctcggttgctaaggttcagaaagttgttgtgatgtcctccaatgctgctgttgatgttaacccggactggccgccaaatagactcaaatatgagagttgctggtcagacctagcgctctgcgaaaagaatgagctcaccaccatggcggcattgagaaatggcgacagaggagtggaggacgacgacgaggacgacgctcgggcgctggcggcggcggaggttgctcgggcggccgtcgacggagcggaggaggaggtagcgctccgcattccaggaggccctgatgtgatgaacaacaaactgtggcacatagtcgatgtccgtgatgtggccgatgccttacttttgctgtacgaaaaaccagaatcatctgggagatacatttgctcatcagatcacatctgcacaagggatttggtgaacttgctgaagatgtacccaaacatccctgatgtggagcataaagcgtcattgacatcgcagaagctgatgagcctgggctgggcgccaaggaggctggaggagacgctctcggacagcgtcgattgctacgaaaatgcaggcattctgaagattttggatgggcatccttgccgacttccccatctcttcaggttgtctgctgacaattga</cdnaseq>

Protein Sequence

<aaseq>MASPAPPRVCVTGGGGFIASWLVKLLLSRGYAVHATLRDPCDPK NANLERLQDASQAAPANLRLFTADVLDLDALTHAVQGCDGVFHLATPSEVIDPAVKGT LNVLKACSVAKVQKVVVMSSNAAVDVNPDWPPNRLKYESCWSDLALCEKNELTTMAAL RNGDRGVEDDDEDDARALAAAEVARAAVDGAEEEVALRIPGGPDVMNNKLWHIVDVRD VADALLLLYEKPESSGRYICSSDHICTRDLVNLLKMYPNIPDVEHKASLTSQKLMSLG WAPRRLEETLSDSVDCYENAGILKILDGHPCRLPHLFRLSADN</aaseq>

Gene Sequence

<dnaseqindica>5225..5414#4759..4934#2753..2887#1654..1839#333..484#1..121#atggcgtcgccggcgccgccgcgcgtgtgcgtcaccggaggcggcgggttcatcgcctcctggctcgtcaagctgctcctctcccgtggctacgccgtccacgccaccctccgcgacccatgtatagtaactgttcatcaccaaattattcaccaatatattggcaccattaccgctctcttggcctcttgctacatccatttccaacctgaagattgaacagttcagccaagaaaattggagtgattcattcatggccaaacaggagagtgacgcatttgcatagtgtccttgattaattaatggcgtaatgctctctgatttcccgtcaggtgatcccaagaacgccaatctggagcggcttcaggacgcgtcccaggcggccccggcgaatctgcggctgttcaccgccgacgtgctcgacctcgacgcgctaacgcacgcggttcagggctgcgacggcgtcttccacctcgcgactccggtgcccgaggataagattgtcgatccggaggcaagtttgatgctaatcaatctgctactgctaatgcatcttcagtgtactcttaactcaatattagaaaactatcattgatcggtcgatccaaatccacaatagtcccggtttcattaaaaaccaggactaaaaataattttttaatcccggtttataagaggaatatgactagttgatctttagtccctgttgattccatgacagaccgtgtcagggccctaaaatctttagtcccagttagtaacatcaaccgggactaaaaacctatttttaagtctcggttgatgttactaaccgggaataaaaatcaaaacgctctatataatccctaatccctagtacttatcctattttcccgtccacacaacaaactcctccctctatctctattttcctctctaacttcttatctttttccttatctctaactccaagccttctctttcctttttgtaacagtggagaaggtggagcggcatgaggaagagggcgggccggccgggcggcggcctacgcggcggcgtgggggccgcacggagacggcctgtgcggcggcggccagccagcgcggaggggaggaggggaggcggcagtggctggccgacttctttttttttttacaatttatgatttatcctgcaatgaatttaatttgtgtgtgatgagaatttgtgatgtattttttagaaattgtgatgtaatgtttttaagagtttgtgatgtatttggagatgatctatttgaggatttggagatgttatgtgatacgtgatgatttggatttgggattttttggtataatttaaggatggggtgaaatcaatatttaatgttaaaaacaatgaaaaagagaaaaataaaaggaaaaagatctttagtcccagttggtaacaatcccggttggtaactaaagatcgatctttactccggttatttaccgggactaaagatagtgatgggctaccaaccggaactacagagcatttctccaccagcatgtgttacagtacggaatattgttctgatagctcaactgaagcttgtcctgattgctcaactaagttgctgaaactctgaactcacaatgttttgaatgtgctttaaaaaaaacaatgttttgaatgcatccgttgcagtcagaagtgattgatcctgctgtgaagggaaccttgaatgtgctgaaggcttgctcggttgctaaggttcagaaagttgttgtgatgtcctccaatgctgctgttgatgttaacccggactggccgccaaatagactcaaatatgagagttgctggtcagacctagcgctctgcgaaaagaatgaggttatatattttgttagtacttttcttacaaataacttatactacctcggtttaaatatatgatgttgttgacttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacctttcatcttattaaaaaaaatctatgtaagaattatttattttattgtgcttttttatcattaaatgttctttaaacatgacttatatttttagcatatttacactagatcttttaataagacgaatagtccaatattatattaagagtaaaatgtatggccggtccttaaagttgagcgcgggtgtcacttaggtccataatcttgtaaattgcacatctaggtccaccatcttgtttaagtgactcattgagatccaaaccccacatgaccagccctgaccaccgacgtggcacaccacgcaagcaccaattttgcaaacaaacccctccgcaacagtagcgccaaggacaacacaaaaaaccccaaatccttcgtcgtagtcatgccacgccgccgccgctaccgacggcgccgcaagcgccagtagcaagcagcacattaacacgacacacacgctcgagtggagacagcggtggcgcacgagagacgacgaggccgaggccgagcaaaatgcctctccgtctcctccttctcctcgcgcgttcgccattagccacccccctcctccttctccatgtgcgctcgccaccggacacccccctcatcgcgcaccacggctacgggcggcggtgagcaagcgcggcggagggtagagcagcggtgggcgagcacacgggggcgggcggtggacagcagtgtcacggcgacgccgggatccataacatcgcggcggcgttgggatcctgctgccgcgctgcccctcaccagctcaccaccatggcggcattgagaaatggcgacagaggagtggaggacgacgacgaggacgacgctcgggcgctggcggcggcggaggttgctcgggcggccgtcgacggagcggaggaggaggtagcgctccgcgtaagccatgtaagccaaacaacccggtcggaggtcctttagacctcaatgagtcacttaaacaagatggtggaactagatgtgcaatttacaagattatggacctaagtaacacccgcgctcaactttaaggaccggccgtgtattttactcttatattaaaaagtcaattgtgccatatctttaaaaacagaggaagtaatactttcttactgcaactgattgccactttgccagaacaataaatataaatcactttcaagcagccgattgtaaatgactaggttctgtccatacagatgtctgattcctcgttggttttgcaacttcagcctgcccttttcatagagaatttacacgatgactaaactgtgatatttactgcttcctgtttgcaggattggtatccctgttgcgaagattatgggcctgttcactttgataaaaaaaaacttaccaaaatttagcattgccaaaattttggcaacttacaaaaattttggcaggatttcttatatagttatcaaaatttggcagtaaattaaatgtagccactttttttttgataactttactaaagtttggtaaggttgaaaatgacgtcaaagtgaataggccctattgctgaataagcggctttcgaatatgcgaagaacaatggactgaatgttgtaacactctgccctccgttggtttttggtccgatgttgcagcctacggtgaatatcagcagcaaattcctcatctatgtgatgaaaggtcccttgttggtgactcctccatttatttcttctcgtttattgcctgaattgttgcttttctgatgaataccctgacaatgcaagttagttatgctccctaacaattagtcaacttgtgttaatgcaaaccctgttactagtgttgaaatgcatttatttggtccagcccaatgctttagatgtgattgcttagttatttcctgtggttagatacttagatgcactttattacaactcaatcaagaaaaaaaatccaaataatgtggtatggccattatctagaatctgtcttgtgagtgatcacttatttctttgcctgccccatgtttatccttgtattcttcagatatagctgcttgacctttttcagatgctctacagtgtatagttgcaagatgggaataatcatcctgaggcagattctctacaatctacttattcatctattgcatgtgattccccacttagctcattaatgttcataacttgatattacacgcttaatattgaatggcaatggacaaagcagtgtacagctctacttaatatagcaccagcgtttgctggctcggtttttttttttaaaaaaaaaaccaacaacaacaacaacaagaagcagtgtacagcgaattctgtgctaaaactgatgaatcgtgaaagaaaagcactcttacgtgtcactgaaagtttttaaaaatgttttgtgtagtgctgtaaatgtaagaagtgataattgtcttgtcatgttcttgccattgtgcaagccatcatgctacattgctattagcctactagttctgacaatttgtttacttcattcatggtgctacacttgactcatcccgatgcatagattctatgcaatctattgcatgtgattcctacacttggctcatttattgtagatatttcacgcctgaatgtgattgtggtggcactgtcagattacaaccaacattcaatgtgccactaaatctttaggaaaatgagtacgcagtactgaaagaaaccttacagttgtcttgttactgttgcaaccacgaatattgctagttactaatacttggcaaaattattttgtttcactgtagttttgaccctgttaattagattccaggaggccctgatgtgatgaacaacaaactgtggcacatagtcgatgtccgtgatgtggccgatgccttacttttgctgtacgaaaaaccagaatcatctgggagatacatttgctcatcagatcacatctgcacaagggatttggtgaacttgctgaagatgtacccaaagtacaactatcccgaggccgagtttagttccaaactatttcttcaaacttttaactttttcatcacatcaaaatttttctacacacaaactttcaacttttccgtcacatcattccaatttcaaccaaagttttaattttagcgtgaactaaacacaccctaaataagtaggttaaatttccctcataccagtttctgtcaagactcaagacttagaacaacatggaataatcctcattgtgtcttcagtatttgcatggcttgaacaaatctttaatttgcttctacagcatccctgatgtggagcataaagcgtcattgacatcgcagaagctgatgagcctgggctgggcgccaaggaggctggaggagacgctctcggacagcgtcgattgctacgaaaatgcaggcattctgaagattttggatgggcatccttgccgacttccccatctcttcaggttgtctgctgacaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0491868, RefSeq:Os09g0491868