Os06g0179500

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0179500| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001063504.1 GI:115466739 GeneID:4340302| Leng...")
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Gene Name

Os06g0179500

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001063504.1 GI:115466739 GeneID:4340302

Length

1761 bp

Definition

Oryza sativa Japonica Group Os06g0179500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3940688..3942448

Sequence Coding Region

3940688..3942448

Expression

GEO Profiles:Os06g0179500

Genome Context

<gbrowseImage1> name=NC_008399:3940688..3942448 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3940688..3942448 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggctccgaccaccaccccggcggccgggacggcgcgccgctggtgttcgacgagctccggtgggtgatccagatccggcgctccctccaggaggacggcggcgacgacgacgacgacaacggcatcccggtgtccgtgttcaacgtgcccaagcagctgcaggcgcacaagccggaggcgtacgtgccgcagttcatcgcgctggggccgtaccaccattggcggccggagctgtacgagatggagcgatacaagctcgccgccgcgcggcgcgcccagaggcacctccgcgagggcgtcaagctcgagcacctcgtcgaacagttcgcgcgcgcggagcgcaaggtcagggcgcactaccaccgctacctcgacttcagcggcgagacgctggcgtggatgatggtcgtcgacggcgcgttcctgctcgagttcttgcagatcttcgccgccgcggaggccgccgccagcggcggcggagggaagccggagctgaggagggtgtcgtcgaggatggcgcacctggtggacttcgccgggaggaagtcggcgcacaacctcatcctccgcgacatgctcatgctcgagaaccagatcccgctcttcctcctccgcaagctcctcgagccgcagtgctcgtcggcggaggaggccagcgagctgctcgggcggatggtcaccggcctcatgaaggagctctgccccttcaagatgatggacaacttcccggccatcgacgtcgccaagcacgcccacctcctcgagctcctctaccacctgctcgtcccgaagccatccgacgacgccgccgccgccgccgacggccacgacgagggctacgacatcgaggagcagccggtggacggcggcggcggcggcggcgaggagaagcagcaatccgccgggtgcgagtacgtgaagcagctgctcgccgcggtgtggggcatcgtgtcgagcctcaagagcgggccgatgcagtacgtggcgaagccgatctcgttcgccgtcaaggcgccatggaagatgctcaccgtggtcccgggcttctcggcgatgaagcacccagtggagtccttcttcatgtccggcggcggcggcgacccgtcgtcgtcgtcgacggcggcggggcaggaccaccaccacgcgatcagccggccaccgctgatcgaggagatcatgatcccgtcagtcaccgagctcgccgccgccggcgtccagttcgcgccgacgaacggcgacgccaccacggtctcgttcgacgccaagacggcgacgctgcacctccccgtggtgacgcttgacggcagcacgacggaggtggtgctccgcaacctggtcgcctacgaggcgtcggcggcgacggggccgctggtgctcgcccggtacacggagctgatgaacggcatcatcgacaccggcgaggacgtggcggcgctgcggcggcgaggggtggtgctgaaccggatgaagagcgacggcgaggcggcgaggctgtggaacgggatgagcaggtcggtgaggctgacgaaggtggcggccatggacgcggcggtggagggggtgaaccggtaccacggcgcgcggtggcgggtgaaggcgaggcggttcatgcggcgctacgtgttcggctcgtggcagctgctcaccttcctcgccgccgtcctcatgctgctgctcaccacgctgcaggccttctgctcggtctacacctgctcgcggtggttcggcgccgtcgccgtcgcgccgccgccgtag</cdnaseq>

Protein Sequence

<aaseq>MAGSDHHPGGRDGAPLVFDELRWVIQIRRSLQEDGGDDDDDNGI PVSVFNVPKQLQAHKPEAYVPQFIALGPYHHWRPELYEMERYKLAAARRAQRHLREGV KLEHLVEQFARAERKVRAHYHRYLDFSGETLAWMMVVDGAFLLEFLQIFAAAEAAASG GGGKPELRRVSSRMAHLVDFAGRKSAHNLILRDMLMLENQIPLFLLRKLLEPQCSSAE EASELLGRMVTGLMKELCPFKMMDNFPAIDVAKHAHLLELLYHLLVPKPSDDAAAAAD GHDEGYDIEEQPVDGGGGGGEEKQQSAGCEYVKQLLAAVWGIVSSLKSGPMQYVAKPI SFAVKAPWKMLTVVPGFSAMKHPVESFFMSGGGGDPSSSSTAAGQDHHHAISRPPLIE EIMIPSVTELAAAGVQFAPTNGDATTVSFDAKTATLHLPVVTLDGSTTEVVLRNLVAY EASAATGPLVLARYTELMNGIIDTGEDVAALRRRGVVLNRMKSDGEAARLWNGMSRSV RLTKVAAMDAAVEGVNRYHGARWRVKARRFMRRYVFGSWQLLTFLAAVLMLLLTTLQA FCSVYTCSRWFGAVAVAPPP</aaseq>

Gene Sequence

<dnaseqindica>1..1761#atggcgggctccgaccaccaccccggcggccgggacggcgcgccgctggtgttcgacgagctccggtgggtgatccagatccggcgctccctccaggaggacggcggcgacgacgacgacgacaacggcatcccggtgtccgtgttcaacgtgcccaagcagctgcaggcgcacaagccggaggcgtacgtgccgcagttcatcgcgctggggccgtaccaccattggcggccggagctgtacgagatggagcgatacaagctcgccgccgcgcggcgcgcccagaggcacctccgcgagggcgtcaagctcgagcacctcgtcgaacagttcgcgcgcgcggagcgcaaggtcagggcgcactaccaccgctacctcgacttcagcggcgagacgctggcgtggatgatggtcgtcgacggcgcgttcctgctcgagttcttgcagatcttcgccgccgcggaggccgccgccagcggcggcggagggaagccggagctgaggagggtgtcgtcgaggatggcgcacctggtggacttcgccgggaggaagtcggcgcacaacctcatcctccgcgacatgctcatgctcgagaaccagatcccgctcttcctcctccgcaagctcctcgagccgcagtgctcgtcggcggaggaggccagcgagctgctcgggcggatggtcaccggcctcatgaaggagctctgccccttcaagatgatggacaacttcccggccatcgacgtcgccaagcacgcccacctcctcgagctcctctaccacctgctcgtcccgaagccatccgacgacgccgccgccgccgccgacggccacgacgagggctacgacatcgaggagcagccggtggacggcggcggcggcggcggcgaggagaagcagcaatccgccgggtgcgagtacgtgaagcagctgctcgccgcggtgtggggcatcgtgtcgagcctcaagagcgggccgatgcagtacgtggcgaagccgatctcgttcgccgtcaaggcgccatggaagatgctcaccgtggtcccgggcttctcggcgatgaagcacccagtggagtccttcttcatgtccggcggcggcggcgacccgtcgtcgtcgtcgacggcggcggggcaggaccaccaccacgcgatcagccggccaccgctgatcgaggagatcatgatcccgtcagtcaccgagctcgccgccgccggcgtccagttcgcgccgacgaacggcgacgccaccacggtctcgttcgacgccaagacggcgacgctgcacctccccgtggtgacgcttgacggcagcacgacggaggtggtgctccgcaacctggtcgcctacgaggcgtcggcggcgacggggccgctggtgctcgcccggtacacggagctgatgaacggcatcatcgacaccggcgaggacgtggcggcgctgcggcggcgaggggtggtgctgaaccggatgaagagcgacggcgaggcggcgaggctgtggaacgggatgagcaggtcggtgaggctgacgaaggtggcggccatggacgcggcggtggagggggtgaaccggtaccacggcgcgcggtggcgggtgaaggcgaggcggttcatgcggcgctacgtgttcggctcgtggcagctgctcaccttcctcgccgccgtcctcatgctgctgctcaccacgctgcaggccttctgctcggtctacacctgctcgcggtggttcggcgccgtcgccgtcgcgccgccgccgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0179500, RefSeq:Os06g0179500