Os06g0179800

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Gene Name

Os06g0179800

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001063507.1 GI:115466745 GeneID:4340304

Length

4674 bp

Definition

Oryza sativa Japonica Group Os06g0179800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3955914..3960587

Sequence Coding Region

3956397..3957661,3958384..3958452,3958560..3958715,3959261..3959591

Expression

GEO Profiles:Os06g0179800

Genome Context

<gbrowseImage1> name=NC_008399:3955914..3960587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:3955914..3960587 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggaacccctgcatttggtgttgcttggttctgctgaccttggtggtctgcgacagttgtttgcacgaagagaggaaacatcttatggacatttgcgatgcgttcctttggccggctggcaatccgcctgactggagtagcagagattgctgccggtgggagagggtgacctgcagctccatcacagggcgtgtcacggcccttgatcttgatgcagcttatccgtcgtggtatggcctactcaactgcagtatgttccttccattccgtgagctgcagaatttgtccttgggaaatgccggcatcgcgggatgcatgcctggtgcaggttttgaagtatggtctaatttacgccaactggaaatcctcgatctatctgaaaatgagttgaatgatagtagtatcatgcccttggttggacttgcatctctgcgttccccattcctcggtgggaacgccataaagaatgactttactgtccaaagattaagcaaaatgaagctggatattcttgatctaagttggaatggaattttcgggaacatatcaagagctgtttgcaatatgacaagtcttcgagaattgcatctaaacggaaattttttctttggggtgctcccatcatgtatcagaaatctaacttttctcagagtacttgatctgtcaaataatctcttaacggcaaggttccccactatttcgttcgcaaacatgacgttacttgagcaactttccctttcccataaccagcttgaaggtctgctactcctaaactctttttcaaatcatctccaactgaaatacctgagactatcaagcaacagtgccagcttccaagtgcaaactgagaatccagaagcaaatatatctagtcagcttcaggttcttgaactatcaaactgcaacctgaatgccaattctggtgttgtaccaagtttcttatcacaccagcacggattatacctaattgatgtttcgaacaataatctaagtggtcatttcccgacgtggttactggagaataatatatatctatcatacttgagtgtgaaacataactcatttgttggatcactcattcttccttccacagtaaatcagaacttatcatggttagatgcatcttataacaggctaagcggggaccttcctgtggacatcaacatcacattccctaatttgagctacctaaacttatcgaagaatttttttcaaggcatatttccttcagccgttagtcacttggagaatctttcaactttagatttatcttacaacaacatatcgggtgaaataactgctagttttcctacaactatgtcgatgaatcatctagtgctaaacgataataatatctcaggggagattcctactagcatttgcaccaacgtgaatcttggtgtggttgattttagcaataacaagttgactggatccattccaaattgcatagcttcaaatcatctattttttatcctcaatctaagagggaatcatttaactggatcaattccaacaggtctatccagccttttgaatcttcaatttcttgatctgtccaaaaaccatctgtctggccccttgccttctttgcccaatttgacatatctccacttaagtgagaatgaactgaatggaacatttccccttgtctggccattcggtgctaatttgaagacaatggatctgcgatataaccaattcagtggtgcaatcccaagatgtatagatgaaacttttccagagttacgaatactattgcttaagggaaacatgttcgaagggatggttccaaaccaagtgtgtctacttacctag</cdnaseq>

Protein Sequence

<aaseq>MRNPCIWCCLVLLTLVVCDSCLHEERKHLMDICDAFLWPAGNPP DWSSRDCCRWERVTCSSITGRVTALDLDAAYPSWYGLLNCSMFLPFRELQNLSLGNAG IAGCMPGAGFEVWSNLRQLEILDLSENELNDSSIMPLVGLASLRSPFLGGNAIKNDFT VQRLSKMKLDILDLSWNGIFGNISRAVCNMTSLRELHLNGNFFFGVLPSCIRNLTFLR VLDLSNNLLTARFPTISFANMTLLEQLSLSHNQLEGLLLLNSFSNHLQLKYLRLSSNS ASFQVQTENPEANISSQLQVLELSNCNLNANSGVVPSFLSHQHGLYLIDVSNNNLSGH FPTWLLENNIYLSYLSVKHNSFVGSLILPSTVNQNLSWLDASYNRLSGDLPVDINITF PNLSYLNLSKNFFQGIFPSAVSHLENLSTLDLSYNNISGEITASFPTTMSMNHLVLND NNISGEIPTSICTNVNLGVVDFSNNKLTGSIPNCIASNHLFFILNLRGNHLTGSIPTG LSSLLNLQFLDLSKNHLSGPLPSLPNLTYLHLSENELNGTFPLVWPFGANLKTMDLRY NQFSGAIPRCIDETFPELRILLLKGNMFEGMVPNQVCLLT</aaseq>

Gene Sequence

<dnaseqindica>2927..4191#2136..2204#1873..2028#997..1327#aatggcaagagttgaaggagtcaaaatagacttattcaatattaggcctctacacgatgggccttcacaacgccacccctacgccgacgccgacgccgacgccgatgccgatgctgccctggttgccggcggcggcggcatcgaccgcgacccctccccgtcggcgccaacttcttcaattccttcctcgatggcatcgaaggccaattcctggctgccggcggcgggggccccgcggtgcccctggccggcctcaaccctccccgttggcgccgatttcttcaattccttccacgatggcgtcgacgcagtaagctctgtattccccattaatccgttcacagcaacttcgacctactgatgatgcaaggtcctgcaggttgcccccaagaacgggctggttgagtggatgaccagactttttttttttttatgaaggtggatgaccagactgattgctattccccaatgcgaggttttgggtccaaaagtgagcagtctgcagatgaccaggaccgatccatctccgaggaaactactttgtttttttatattattattattattattattattattattattattattattattattattattattattttctcgtggatttagtcattgctaccatggagcaagcatgccggcagtccacttatccaagactccaagtccaagccccactcgcttgctggaataaagaaatctcaggcttttcttctactaagagataatgtgcgcgggctggctagcttcacggttgacgccgagtcacgaggccgatgctgacaccgatttcttttcatttcaggtaggcagtcattaccgtcgaaatcagcgacctgcttgatgccaccatggggagtgtggaatctgctggtagtggtaattgagtgtgatgcaccgagaccatcagtataaaatcggtgcctgtgggttaaatttcttgagagctagcgtatttgaggattgggaattgtggtggccatgaggaacccctgcatttggtgttgcttggttctgctgaccttggtggtctgcgacagttgtttgcacgaagagaggaaacatcttatggacatttgcgatgcgttcctttggccggctggcaatccgcctgactggagtagcagagattgctgccggtgggagagggtgacctgcagctccatcacagggcgtgtcacggcccttgatcttgatgcagcttatccgtcgtggtatggcctactcaactgcagtatgttccttccattccgtgagctgcagaatttgtccttgggaaatgccggcatcgcgggatgcatgcctggtgcaggtcagcaggtcttccttccttctcctccctcaagctgtttcacatatcgaagaaggcatttaggaacattgatattatatatttaccaagagaaattttacaatccttgagaggtaccacaatttttagtgcaaatttggtacctccgtacctccggtactgagaggtacaaaattttacagtagaaaatacggtatctttcggtaccttctcaacgactttaaaatcactcatttacggatttaccaatcgttgggccgcaagttgtagcaactaagaagtctctgttcagaataacttggatttcaccacaccaaggttgtcttgctagatgtaaacaccttgtccctgtgacccaccgaggaagggatcagggagctccctagggtgtgtgatgcttaggtaaaatggtcaccttggtgtccttttgttggaccttctctaggtaggtgcatacgtatgcacgcagtcggataactcctgttgcattagtctttatttttactaattttcatatttatagtgtttttcatcattcgctgcaggttttgaagtatggtctaatttacgccaactggaaatcctcgatctatctgaaaatgagttgaatgatagtagtatcatgcccttggttggacttgcatctctgcgttccccattcctcggtgggaacgccataaagaatgactttactgtccaaagtaagcatcacacatgcttgtattttcaatattagtttttttcctgacaaaagattttttatttcggaatttatctcttattttggtttatttattgtatgttataggattaagcaaaatgaagctggatattcttgatctaagttggaatggaattttcgggaacatatcaagaggtatggcatctcatttaaagtttttgtgaaagcataaaggtgcaatagtaaatgagtaaatgaccgtgtcatggttccaatattttacaactgtttctacgttgttcaaaataatctcagccacgcttacaaattaatggcatgcagtttgaagttcaaactttgaacaccgatgtgagtgtggtggaaaagtgaataactttacactttacattggggcaccaaatttaagtacatgattattatggtagtaatatatcttgttctccttcaatcgataaaataattcaaatttagtgtgatcacaaagtagatacaccaactccaaaccacagtgtgcttaacttcagtagtttagaaccagaagctcccaagtcccaagggcaaaaacttttaattgctgccttgtgggagtattctttcaaatagtcatgtcaaagaaatcttacttaactctgctctttatgctattttgaaacattagtatgacttcccagttcccaatgattagtatgtacttcctccacctcataatatagcaacgtagtactacgtatgtggacaagccccctgtccagatacgtagtactaggtgatatcccgtctagtactaggttgctatattgtgggacggagtgagtactcgcaaacatagcctagaattaggagcagctatgtgtaggaatcatgtactgacatcacacagttcatttcatttacagctgtttgcaatatgacaagtcttcgagaattgcatctaaacggaaattttttctttggggtgctcccatcatgtatcagaaatctaacttttctcagagtacttgatctgtcaaataatctcttaacggcaaggttccccactatttcgttcgcaaacatgacgttacttgagcaactttccctttcccataaccagcttgaaggtctgctactcctaaactctttttcaaatcatctccaactgaaatacctgagactatcaagcaacagtgccagcttccaagtgcaaactgagaatccagaagcaaatatatctagtcagcttcaggttcttgaactatcaaactgcaacctgaatgccaattctggtgttgtaccaagtttcttatcacaccagcacggattatacctaattgatgtttcgaacaataatctaagtggtcatttcccgacgtggttactggagaataatatatatctatcatacttgagtgtgaaacataactcatttgttggatcactcattcttccttccacagtaaatcagaacttatcatggttagatgcatcttataacaggctaagcggggaccttcctgtggacatcaacatcacattccctaatttgagctacctaaacttatcgaagaatttttttcaaggcatatttccttcagccgttagtcacttggagaatctttcaactttagatttatcttacaacaacatatcgggtgaaataactgctagttttcctacaactatgtcgatgaatcatctagtgctaaacgataataatatctcaggggagattcctactagcatttgcaccaacgtgaatcttggtgtggttgattttagcaataacaagttgactggatccattccaaattgcatagcttcaaatcatctattttttatcctcaatctaagagggaatcatttaactggatcaattccaacaggtctatccagccttttgaatcttcaatttcttgatctgtccaaaaaccatctgtctggccccttgccttctttgcccaatttgacatatctccacttaagtgagaatgaactgaatggaacatttccccttgtctggccattcggtgctaatttgaagacaatggatctgcgatataaccaattcagtggtgcaatcccaagatgtatagatgaaacttttccagagttacgaatactattgcttaagggaaacatgttcgaagggatggttccaaaccaagtgtgtctacttacctagccctgtcttttcacatggacaactttatgtcgcactctcacgtgtaacatcgcctgatggtcttcgtattctaattgagaatagtccaactgagcatgtgaccagcactcacaatgttgtttacaaagaaatatttaacgatctggatcaacaaggaatgcatacatgattacaggtaagtcaagcatacgtgttctacctattggtaatttgttgtgtttggttgccttgcccccaatgtgagtcctaggttcttttttctcagacctactaacttgacctgattatattctttgtgttttgataatgtcaaatttacctatcttcattgtttgcaggattctttatctgaaacctctgccttgtcaaagcagcacgcagttggtattattacaatagttcagttctttcctgtctattttatgtgatcttcacactcaactttcctctaatatatgccttctggtatccatggtttcttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0179800, RefSeq:Os06g0179800