BGIOSGA027078

From RiceWiki
Revision as of 17:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027078

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027078, complete gene.

LocusTag

OsI_29009

Ensembl Transcript ID

BGIOSGA027078-TA

Ensembl Protein ID

BGIOSGA027078-PA

Length

3531

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:18268455..18271985

Sequence Coding Region

18271881..18271985,18271267..18271432,18270196..18270500,18269621..18269807,18269344..18269497
,18268819..18268881,18268628..18268724,18268455..18268547

Genome Context

<gbrowseImage1> name=IndicaChromosome08:18268455..18271985 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:18268455..18271985 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAGTGTTGAAGAGATGGAGTACAAGCAGATGATGCAAGAGAAAATCAAGGAAACCAAAGATTTTATGAAGAAGAAAGTTATTGAGATTGAGAAAACCAGGATGGAGAAAGGCAAACATAACAAAGGAGGATACTCATCAATATCAGGTCCCCAGGTGATTGAAAAATCTTTCAATGACATGAGCATTAGTTGTACTGGATTTGGAAGTGGTTCTGGATTAGGTGGATTGAACACAGATACAGACACATTTACTAGCAGGCCCAAAGGTCGTACATCTGGAGGTACTACAGGTGCTGGTAAAGGCATTGGAATGAAATTAGGAAATACAAAGAAGACGAACCAGTTCTTAGAATCATTGAAGGCTGAAGGTGAAGTCATTATGGAAGATTTTCAACCATGTTCTCTTCAGTCAAGGTCATCGCCTCTACCACCGAGTGATCCTGTCACAGTGGCTGTTGAAGAGAAACTCAATGTTGCAGTGAAAAGAGATGGTGGTGTTAATAATTTTGATGTTCAAGGAACACTTGCTCTGCAGGTCCTTAATGATGCAGATGGATTAATCCTGTTGCAGATAGAAAGCCAAGATATTCCTGGACTTAGTTTCAAAACACACCCCAATATCAACAAGGACTTGTTTAACAGTCAGCAAATTCTGGGGGCAAAAGATCCTATCAGGCCTTTCCCAAGTGGTCAAAATGAAACTCCTCTAGTGAAATGGAGAATACAGGGGATGAATGAGTCATCTTTACCTCTATCAGTCAATTGCTGGCCATCAATATTAGGAAATGAAACCTACGTCAACATCGAGTATGAAGCTTCTGAGATGTTTGACCTGCACAGTGTCATCATATCTATACCTCTTCCTGCACTTCGGGAGGCTCCATGTGTTAGACAGATAGACGGAGAGTGGAAGTATGATTCAAGAAACTCGGTTTTGGAATGGTCTATTATCCTTATTGATCAATCAAACCGCAGTGGATCCATGGAATTTGTTGTTCCTCCAGCTGATCCATCAATGTTTTACCCCATATCCATTGGATTTTCCGCATCGAATACTTTCAGTAATGTGAAGGTTACTGGAATCCGCCCTTTGAATGAAGGTAGCAACCCTCCAAAGTATTCGCAGAGGGTTCGTTTGGTTGCTGATAATTATCAAGTGGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MDSVEEMEYKQMMQEKIKETKDFMKKKVIEIEKTRMEKGKHNKGGYSSISGPQVIEKSFNDMSISCTGFGSGSGLGGLNTDTDTFTSRPKGRTSGGTTGAGKGIGMKLGNTKKTNQFLESLKAEGEVIMEDFQPCSLQSRSSPLPPSDPVTVAVEEKLNVAVKRDGGVNNFDVQGTLALQVLNDADGLILLQIESQDIPGLSFKTHPNINKDLFNSQQILGAKDPIRPFPSGQNETPLVKWRIQGMNESSLPLSVNCWPSILGNETYVNIEYEASEMFDLHSVIISIPLPALREAPCVRQIDGEWKYDSRNSVLEWSIILIDQSNRSGSMEFVVPPADPSMFYPISIGFSASNTFSNVKVTGIRPLNEGSNPPKYSQRVRLVADNYQVV</aaseq>

Gene Sequence

<dnaseqindica>1..105#554..719#1486..1790#2179..2365#2489..2642#3105..3167#3262..3358#3439..3531#ATGGATAGTGTTGAAGAGATGGAGTACAAGCAGATGATGCAAGAGAAAATCAAGGAAACCAAAGATTTTATGAAGAAGAAAGTTATTGAGATTGAGAAAACCAGGGTGCGCCCTACTCTTTTTTTGCAGACAAATATGACTTCTATTTAGCTAGTAGGCAAAATAGAGCTGTTACTTCTATTTAGTCCTGTTTTTTTTTTTTTTTATCTTGGCCTACTTCGGTTACAGTTACTATCAGTTCCTTCAATCTTTGATGATTACTTGAGTTACAGTTTATCTGTCTGGATAGACTTATGTTTTTTCTAGACTAGCTTGTTGGGCTTTAGAATCTGTAAGAATATATGATAAATTTAGTACTAACATAATTTCTACTAGCTAGACTGTATGATAGCCTTAGGAGAAATTAGGTCAAACAAGACAAAATAAAATTAGAGAAATATCATACAGGAAACATATCCCTTGGAATCATACTACATTATTGGTTACAATGACCTTTCTATACATTACTTGTTATTGTGTAGCTTTCAATCGTAAATTGTTGGTGTTTATGCAGATGGAGAAAGGCAAACATAACAAAGGAGGATACTCATCAATATCAGGTCCCCAGGTGATTGAAAAATCTTTCAATGACATGAGCATTAGTTGTACTGGATTTGGAAGTGGTTCTGGATTAGGTGGATTGAACACAGATACAGACACATTTACTAGCAGGCCCAAAGGTATTATTTTTCGGTCTATTTTAACAAATACTACATGCAGTATTAGTAGAAATGCATATTGTGTCCATTCCTATTGCCTGGTAACAATTTTATTTATTTATATTTTCTCTTCTTCTATTTTATCCTGGTTTTTCTTATATATATCTGAGATGATTCCTTCAGTCTTGAAAGACCAGATGGTTTGGACATGGTTTATGTCAATGTTTAACACTTCGAACATCAAAATCCTTTCGATATTTAGGTTCGATGCATGAGAATCATAAATATATTGCAGTGAAATTAGTGAGTAAAGTTGTATTTTCAAGACATGTAGTCCAAAACAAGATTTGTTAAGACCAGAAGGAGCATGCATTCAGCTAGCCTTTTAGACTTCAAACCCTTAAATATGGTAACGTCTGTGGTGTTCTGTAAAATATAATTTAAATAGTTACTAAACGTAAAATTGTACTGTTTCAGAATAAAAATAAGTCATGCAGCAAACATACCAGAGCTAACTTGCATGCTATATCTGTGATGCAAATCTATTTATTGTACAAGTCGGTGGTTGCCACAATGCTGTCTTAATTGAACCTAGCCTTTCTTTTATCTGTGTAGATTATCTGCTGATTGATTAAAATTTATGTTTTCTTCTCAGTCCTGTTATCCAGAATATGTTTTTGTCAAGTCCTTCTCGACATTTTGGTCAACTATATTTTCTTTTCTTTAACTGCAAGAAGAATTTACAAGATGTTATGTTATTTTGTTCTAAATAGCAACCTACCTGCAGGTCGTACATCTGGAGGTACTACAGGTGCTGGTAAAGGCATTGGAATGAAATTAGGAAATACAAAGAAGACGAACCAGTTCTTAGAATCATTGAAGGCTGAAGGTGAAGTCATTATGGAAGATTTTCAACCATGTTCTCTTCAGTCAAGGTCATCGCCTCTACCACCGAGTGATCCTGTCACAGTGGCTGTTGAAGAGAAACTCAATGTTGCAGTGAAAAGAGATGGTGGTGTTAATAATTTTGATGTTCAAGGAACACTTGCTCTGCAGGTCCTTAATGATGCAGATGGATTAATCCTGTTGCAGGTAATTTTTTTATATTTATTAACATTATTCTTGTATTGTTGTCATATATGGGAAATTTGTACTTTGAAACAGAATAAAACAACATAAAAAACATTTTCCTTTCTTTTTTCGGTGTGAAGATATAGTGATATTGTTTTAATAAATATAATGCTTTCCTTCTACTATGATGCCCTTTCACATAAAATAGATTGTGCACAGATTTTTTTTCTTACTCCATGGAAATGCGGTGATGATCTTCACTGTAACATTCGCAATGATTTATGTTTCTAACGCCATGCATTTATTGCTAACAAGCAACCTTACTGCACATTGTTTTGGGTAACCAAATCTCTTTCTTACTATTGTTTGGAGTTGGTTTATTCACTAGTTAATACTTGCTATCTTGTAGATAGAAAGCCAAGATATTCCTGGACTTAGTTTCAAAACACACCCCAATATCAACAAGGACTTGTTTAACAGTCAGCAAATTCTGGGGGCAAAAGATCCTATCAGGCCTTTCCCAAGTGGTCAAAATGAAACTCCTCTAGTGAAATGGAGAATACAGGGGATGAATGAGTCATCTTTACCTCTATCAGGTGTACATTCACTTCTCTCTCTTCTCTGGTATCTAGTAATTTGGAGTTCTAATAACTTTCACTTCTCTCTCTTCTCTGGTATCTAGTAATTTGGAGTTCTAATAACTTGTTTGCTTTGCATAGTCAATTGCTGGCCATCAATATTAGGAAATGAAACCTACGTCAACATCGAGTATGAAGCTTCTGAGATGTTTGACCTGCACAGTGTCATCATATCTATACCTCTTCCTGCACTTCGGGAGGCTCCATGTGTTAGACAGATAGACGGAGAGTGGAAGTAATATTCCTGTTCCTCTACCGTTCTCTTATGTATTTGTAACTACTGCAAAATTTTGTTGTGAATTTTTTTTTTATTTTTGTTGAAAGATTTCCTTTGCATGTCCAGGCCAATGCATAATGTCTGCTGTTCTTGCATCATGTCGCCTTTTTGGCAGATATTTAAGGGGGCGGGGGGGGGGGGGGGCACACGACTGCATGGCAATATCATATTAAGTTTTTATATGAAACATTACTAACGGTTACTAGTATTCTAGTTTTTATTGTTTACGGTAGATTCGAAGTGTTAATGGATGTGACTCCTCGGAATGGCACTTAACTATTTGATTCTATTATTCACGTTGCATTGTCTGGAATGCTATTACAAACTCATCCAGACTCTGTCCCTTTTGTATCCTTGAGCTTGTGTGCATATGCTCTCTTTCTCATGCCTTCTGGTATTTTCCCTTTCTTTGCCCTACAGGTATGATTCAAGAAACTCGGTTTTGGAATGGTCTATTATCCTTATTGATCAATCAAACCGCAGGTACATGAAATCTGTGAATTCCAAATTATCATTGTTCTTTTATCTTGTAGTTTATGCTCTTATTACTAGCTCTTATTTTTGTGAACCATTGCAGTGGATCCATGGAATTTGTTGTTCCTCCAGCTGATCCATCAATGTTTTACCCCATATCCATTGGATTTTCCGCATCGAATACTTTCAGTAATGTGAAGGTTAGTTTGCCCATTTAGTTTGACAGATTCTCCTTCCCATCTCTCCATTTTTGTTAATTCTGTTTGCTGGATATTTTCAGGTTACTGGAATCCGCCCTTTGAATGAAGGTAGCAACCCTCCAAAGTATTCGCAGAGGGTTCGTTTGGTTGCTGATAATTATCAAGTGGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027078