Os09g0492700

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0492700| Description = Similar to 3-hydroxy-3-methylglutaryl coenzyme A reductase (EC 1.1.1.34) (Fragment)| Version = NM_001070076.1 GI:1154...")
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Gene Name

Os09g0492700

Description

Similar to 3-hydroxy-3-methylglutaryl coenzyme A reductase (EC 1.1.1.34) (Fragment)

Version

NM_001070076.1 GI:115479894 GeneID:4347443

Length

4558 bp

Definition

Oryza sativa Japonica Group Os09g0492700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19727772..19732329

Sequence Coding Region

19727866..19728824,19729080..19729261,19730279..19730625,19731493..19731735

Expression

GEO Profiles:Os09g0492700

Genome Context

<gbrowseImage1> name=NC_008402:19727772..19732329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19727772..19732329 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgtggagggccgccgccgcgtgccgctgccgctgccgccgccgacgaggcgggggaagcagcagcagcagcaggggggggagagggcgaggagggtgcaggccggggacgcgctcccgctgccgatccggcacacgaacctcatcttctcggcgctgttcgcggcgtcgctggcctacctgatgcggcggtggcgggagaagatccgcacgtcgacgccgctccacgtggtggggctcgccgagatcctcgccatctgcggcctcgtcgcctcgctcatctacctcctcagcttcttcggcatcgcgttcgtgcagtccgtcgtctccaacagcgacgatgaggaggaggaggaggacttcctgatcgactcccgcgccgcgggccccgtcgccgcgcaggctacccctccgccggcgccggcgccgttctcgctgctggggagcgcctgcgccgccccgaagaaaatgccggaggaggacgaggaaatcgtggccgaggtcgtggcggggaagatcccgtcgtacgtgctggagaccaggctgggcgactgccgccgcgccgccgggatccggcgcgaggcgctgcggcggaccacggggagggagatcaggggcctccccctcgacggcttcgactacgcctccatcctcggccagtgctgcgagctccccgtgggctacgtgcagctgccggtgggcgtcgccggcccgctcgtgctcgacggcgagcggttctacgtcccgatggccaccaccgagggctgcctcgtcgccagcacgaaccgcgggtgcaaggccatcgccgagtctggcggtgccaccagcgtcgtgctccaggacgggatgacgcgcgcccccgtcgcccgcttcccctccgcgcgccgcgccgccgagctcaagggcttcttggagaacccggccaacttcgatactcttgccatggtcttcaatagatcgagcagattcgctaggctgcagagagtgaagtgcgcggtggccgggaggaacctctacatgcggttcagctgcagcacaggggatgccatggggatgaacatggtgtccaagggcgtccagaacgtgctggactaccttcaggatgacttccctgacatggatgtcatcagcatatcaggtaacttctgttctgacaaaaagtcagctgctgtaaattggattgagggacgtggaaagtctgtggtttgtgaggcagtaatcaaagaggaagttgtgaaaaaggttctcaagaccaacgttcagtcactagtagaattgaacgtcatcaagaaccttgctggttcagctgttgctggagctttgggtggcttcaatgcccatgctagcaacattgtaacagccatctttattgccaccggtcaggatcctgcacagaatgtggaaagctcccagtgcatcacaatgttggaagctgtaaatgatggcaaagatcttcatatctctgttactatgccatcaattgaggtgggcacggttggtggaggcacacagctggcctcacagtctgcttgcttggacctacttggcgtgaagggcgcaaacagggaatccccaggatcaaatgcgaggctcctggccgccgttgtggctggcgctgtccttgctggggagttgtccctcatctctgctcaagctgcaggccatttggtccagagccacatgaaatacaacagatccagcaaagatatgtccaaggtcgcctcttga</cdnaseq>

Protein Sequence

<aaseq>MAVEGRRRVPLPLPPPTRRGKQQQQQGGERARRVQAGDALPLPI RHTNLIFSALFAASLAYLMRRWREKIRTSTPLHVVGLAEILAICGLVASLIYLLSFFG IAFVQSVVSNSDDEEEEEDFLIDSRAAGPVAAQATPPPAPAPFSLLGSACAAPKKMPE EDEEIVAEVVAGKIPSYVLETRLGDCRRAAGIRREALRRTTGREIRGLPLDGFDYASI LGQCCELPVGYVQLPVGVAGPLVLDGERFYVPMATTEGCLVASTNRGCKAIAESGGAT SVVLQDGMTRAPVARFPSARRAAELKGFLENPANFDTLAMVFNRSSRFARLQRVKCAV AGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQDDFPDMDVISISGNFCSDKKSAAV NWIEGRGKSVVCEAVIKEEVVKKVLKTNVQSLVELNVIKNLAGSAVAGALGGFNAHAS NIVTAIFIATGQDPAQNVESSQCITMLEAVNDGKDLHISVTMPSIEVGTVGGGTQLAS QSACLDLLGVKGANRESPGSNARLLAAVVAGAVLAGELSLISAQAAGHLVQSHMKYNR SSKDMSKVAS</aaseq>

Gene Sequence

<dnaseqindica>95..1053#1309..1490#2508..2854#3722..3964#ggatctcatctcatctcggccggtcttcgatccccaaacccccccgccccgccggagtcccccctgctccgacgagcctcgccgcgccgcgccgatggctgtggagggccgccgccgcgtgccgctgccgctgccgccgccgacgaggcgggggaagcagcagcagcagcaggggggggagagggcgaggagggtgcaggccggggacgcgctcccgctgccgatccggcacacgaacctcatcttctcggcgctgttcgcggcgtcgctggcctacctgatgcggcggtggcgggagaagatccgcacgtcgacgccgctccacgtggtggggctcgccgagatcctcgccatctgcggcctcgtcgcctcgctcatctacctcctcagcttcttcggcatcgcgttcgtgcagtccgtcgtctccaacagcgacgatgaggaggaggaggaggacttcctgatcgactcccgcgccgcgggccccgtcgccgcgcaggctacccctccgccggcgccggcgccgttctcgctgctggggagcgcctgcgccgccccgaagaaaatgccggaggaggacgaggaaatcgtggccgaggtcgtggcggggaagatcccgtcgtacgtgctggagaccaggctgggcgactgccgccgcgccgccgggatccggcgcgaggcgctgcggcggaccacggggagggagatcaggggcctccccctcgacggcttcgactacgcctccatcctcggccagtgctgcgagctccccgtgggctacgtgcagctgccggtgggcgtcgccggcccgctcgtgctcgacggcgagcggttctacgtcccgatggccaccaccgagggctgcctcgtcgccagcacgaaccgcgggtgcaaggccatcgccgagtctggcggtgccaccagcgtcgtgctccaggacgggatgacgcgcgcccccgtcgcccgcttcccctccgcgcgccgcgccgccgagctcaagggcttcttggagaacccggccaacttcgatactcttgccatggtcttcaataggtataaacgacgcattccactttaatcccctcttgtccctttcactctatgttgcacgcgcatagcaaaatgacattttagacagtgtggctcttgtgttggacgacacgtctgttgccatcagtccacatcaagacataaatttcattcaacctataattaattccccgctattttgtttacaagttttgttttacaaatcttaaggttggatggtaagataatataagctaatttgtggaaatatatgagcagatcgagcagattcgctaggctgcagagagtgaagtgcgcggtggccgggaggaacctctacatgcggttcagctgcagcacaggggatgccatggggatgaacatggtgtccaagggcgtccagaacgtgctggactaccttcaggatgacttccctgacatggatgtcatcagcatatcaggtttttacttcaatttttaagccatgccatgaaccagtatacttgctttacttttgaagtttattagtctgcggtcacacggcggcttatactcttgtcagcatattgattgactagttcttcttccaatggtgcgtagcatatagacattagatagcgttcaaacaactttaatagacggtggctaactacggaagcagaacagtgaacataaccaattggtggattgcataggctcatcgtaaaccaccgctgaaaagtttcccaaaagcttaatcgatattgacaaagaagagaacttttcagccagacagtcatgaactatctgggcaagatagatggttaggtctcaaatttaggcactctgctcgttttgcacaacaaaagtgaggggaattggcgaaaatgatttgttgaactgcaaaatctttctttgatgtttgcgcttgatctaagctgatgttgaccttgttcttattaatggtgtggtttttaccttttcgccatattcctccacctgtcagctgtcgatagttctagtgctagtactttcaagcgatgacaagatgccgataaaagatgtttgacgaagccaacacatccttcacttgcatactacatacactcaattttcaacataacacaagcaatattcttatcctgatttcttcctgcaaggcttggctgccatctgtaaagcactaaaatttaaactgattcttattgtgagagaatctccagagatactatgttagaaaatcctacgagtggtgtttctttgctctttggaacctattgagctcatcaagtcatcataaagcagtactgttagttacccccatgatcacctcctgatagcaagttagtagcttttaggtgatctgttgatgattagaacaggatatgccgttagctatacaactgtatcttgtgtacatcacaacataatagcttttaaatctttccatactttttcatgctttataatttcctaaacttatatcctcatacaaacaggtaacttctgttctgacaaaaagtcagctgctgtaaattggattgagggacgtggaaagtctgtggtttgtgaggcagtaatcaaagaggaagttgtgaaaaaggttctcaagaccaacgttcagtcactagtagaattgaacgtcatcaagaaccttgctggttcagctgttgctggagctttgggtggcttcaatgcccatgctagcaacattgtaacagccatctttattgccaccggtcaggatcctgcacagaatgtggaaagctcccagtgcatcacaatgttggaagctgtaaatgatggcaaagatcttcatatctctgttactatgccatcaattgaggtattatattgtcctttaacctcagcttcttcgtatttttcttagattgcaggctatagagtttgtattgattattgagtaatcttcacctagtactaattgtttgtctcacactactgaaaggcagtgccttgcgctaagcttcaccgttatactagttagtgattaggtgctaggcaggtcctgttacaagcatagcgccttttggaacatgcattgtggtccctgatcagttgacacccatcatctatgtcttgtgtggaaagctagtgactggtcaaaacaatttgatgtccttcatgatataggttattattttgttttttttgcccagcagatgcccttttttagtattatatttttgactccaccaaggagcaagtatgtacatgaaattaaacttgaccacaaatttaatcttgaatttatatggaaaaaccactatgcagagttaggaagtactatgtcagaatcaaatcatttgcatgatgtgtttagctagtacatgttctgtcgaataaactctttgtctttaacgatgctaattcatcattgttcttggacagttggtattcataacctccgcgctttttttttttaaaaaaaagaaacaaggattcctttcatatgctgtccagtgtccacttgctcacttgctcttgttaaaatcaacaaatgctagctagatcaacagctctcgtgtgttttattaatggcttaatcttgtaattttgtgtttgcttttgcttagaaagtcatctactagcctgtagggaacacctggtggacatttatgcattagcatttatcttatgtttgccaattatatataaattgatgaggtgttctgtgataaccaaaatgcaggtgggcacggttggtggaggcacacagctggcctcacagtctgcttgcttggacctacttggcgtgaagggcgcaaacagggaatccccaggatcaaatgcgaggctcctggccgccgttgtggctggcgctgtccttgctggggagttgtccctcatctctgctcaagctgcaggccatttggtccagagccacatgaaatacaacagatccagcaaagatatgtccaaggtcgcctcttgagcgtatcatttggatcattgccgaggaaatggacaaaaccccgtaatgttaactactgtctaattgtcttcttgtacccgctggagagagactggaagtggacacccaagagcttcacatgctgattccatgtggcatgctcgaggtaaaaaaaaaaaaggaagaaaaaaaagagacaaacccatcaggctaacgggtgtctactcagtagagttgagtggccatatttaccaggcggaggatgccgttggtggtgtatgtggcctattcgtttattgatgtttattattgctcttctacaaagtcgctaactccggacgatgggcattcttctatcactgggttctgtgtccaaagcaagcttgcattacagttcacaacccttccttgggcgcgtcgtcggcagctgctggatctttctgtcagttactgcctcgagatgcttgtattacagtttcagctttgtaactagccaattagttttttcgtctaatctttttttattttaatcttgccctggtgatagtcggtgatgttcctgtaaaaaaatgttgtggttcagggtggttatttataattcgtgttggtggtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0492700, RefSeq:Os09g0492700