Os06g0182300

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0182300| Description = Similar to Callose synthase 1 catalytic subunit| Version = NM_001063518.1 GI:115466767 GeneID:4340315| Length = 6053...")
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Gene Name

Os06g0182300

Description

Similar to Callose synthase 1 catalytic subunit

Version

NM_001063518.1 GI:115466767 GeneID:4340315

Length

6053 bp

Definition

Oryza sativa Japonica Group Os06g0182300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4068733..4074785

Sequence Coding Region

4068733..4069102,4069225..4069454,4069530..4069642,4069990..4070073,4070162..4070277
,4070365..4070484,4070576..4070687,4070963..4071152,4071240..4071308
,4071392..4071517,4071610..4071719,4072768..4072919,4072987..4073110
,4073196..4073290,4073424..4073547,4074302..4074462,4074557..4074641
,4074724..4074785

Expression

GEO Profiles:Os06g0182300

Genome Context

<gbrowseImage1> name=NC_008399:4068733..4074785 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4068733..4074785 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tttgctcagttgtggaatgaagtgatatgtagtttccgggaagaagatcttataagtgataaggaaatggacttactggtggttccttattcgtcagaccccagtcttaaactgatgcagtggccactcttcttgcttgctagcaagatacctatagctttagacatggcagcacaatttcgaccaagagattccgatctttggaaacgtatatgcgcagacgagtatatgaaatgtgctgtactggaatgctacgagtcattcaagcttgttcttaatttactcgtaattggagaaaatgagaaaaggattattggtattatcataaaagaaattgaagctaacatcgcaaagaacacattccttgccaattttagaatgagcgcactgccagtcctgtgcaagaaatttgtggagcttgtatctgccctgaaagaaagggatgcctccaaatttgacaatgtagtattgctgcttcaagacatgttagaagtaataacaagagatatgatggtcaatgaaatcagagagctagctgagtttggtcatgggaacaaggattctgtaccaagaaggcaactttttgcgggtactggtacaaagcctgcaatcgtctttccacccccaatttcagcacagtgggatgagcagatcaagcgtctgtacctccttttgaccgtgaaagaatcagcgatggacgtgcctacaaatcttgaagcccgtcggaggatagcatttttcactaattctttattcatggacatgccacgtgcacctagagtacgcaaaatgctgtcattcagcgttatgactccatactacagtgaggaaactgtatattcaaggaatgacctcgatctggaaaatgaagatggtgtctcaattatattctacctgcaaaagatttttccagatgaatggaataattttttggaaagaattggttgccaaagagagagtgaagtttggggaaatgaagaaaatgtcctacaacttcgtcattgggcttctcttagagggcagacactctgtagaacagttagaggcatgatgtactacaagagagccttgaagcttcaagcttttcttgacatggcttctgagtctgagatattggaaggatataaagcagttgcagatccagcagaggaggagaagaaaagccaaagatctctgtcatctcaacttgaggctatagcagacatgaagtttacatatgttgcaacttgccaaatatacggcaatcagaaacaatctggtgatcgacgtgcaaccgatatcttaaacttgatggtgaattatcctggtttgcgcgtggcatacattgacgaagttgaagagagagacggtgaaaaggtgcagaaggtcttctattcagttttggtaaaagctcttgacaatcatgatcaggaaatataccgcataaaattgccaggaccagcaaaattaggtgaaggtaaaccagaaaaccagaatcatgcaattgtctttacacggggtgaagctctccaaacaattgatatgaaccaggacaattatttggaggaagctttaaaaatgcggaatttactggaggagtttcacgagaaccatggtgtgcgccagccaacaattcttggtgtgcgtgagcacattttcactggaagtgtgtcctctctcgcgtggtttatgtcaaaccaggaaacaagctttgtgacaattggacagagagtactagctaatccattgaaggtacgttttcactacgggcatcctgatgtatttgatagaatttttcacattacacgaggtggcattagcaaggcttcctgtggtataaatttaagtgaagacatttttgctggtttcaactcaacactgagacgtggaaatgtcacccaccatgaatacattcaagttggcaaaggacgagatgttggtcttaatcaaatttctctctttgaagctaaagtggcatgtggtaatggagagcaaacactcagcagagacatctatcgcttgggtcaccgctttgactttttccggatgctgtcgtgctactttaccactgttggattttatatcagttcaatgatggttgtcataattgtctatgtcttcttgtatggaagactttacctagcattaagtggactcgagttagcaattatgaagcaagcacgaatgagaggtaacactgctcttcaggcggctatggggtctcaatctattgtgcagctaggtcttttgatggccttacccatgtttatggagattggactagaaaggggttttagaagtgccctaggggatttcatcattatgcagcttcagctctgctctgttttcttcactttctcccttggcacaaaatcacattactttggccgcacaattctgcatggtggtgccaaatataaagcgaccggcagaggctttgtagttcgccatgtaaaattccctg</cdnaseq>

Protein Sequence

<aaseq>FAQLWNEVICSFREEDLISDKEMDLLVVPYSSDPSLKLMQWPLF LLASKIPIALDMAAQFRPRDSDLWKRICADEYMKCAVLECYESFKLVLNLLVIGENEK RIIGIIIKEIEANIAKNTFLANFRMSALPVLCKKFVELVSALKERDASKFDNVVLLLQ DMLEVITRDMMVNEIRELAEFGHGNKDSVPRRQLFAGTGTKPAIVFPPPISAQWDEQI KRLYLLLTVKESAMDVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSE ETVYSRNDLDLENEDGVSIIFYLQKIFPDEWNNFLERIGCQRESEVWGNEENVLQLRH WASLRGQTLCRTVRGMMYYKRALKLQAFLDMASESEILEGYKAVADPAEEEKKSQRSL SSQLEAIADMKFTYVATCQIYGNQKQSGDRRATDILNLMVNYPGLRVAYIDEVEERDG EKVQKVFYSVLVKALDNHDQEIYRIKLPGPAKLGEGKPENQNHAIVFTRGEALQTIDM NQDNYLEEALKMRNLLEEFHENHGVRQPTILGVREHIFTGSVSSLAWFMSNQETSFVT IGQRVLANPLKVRFHYGHPDVFDRIFHITRGGISKASCGINLSEDIFAGFNSTLRRGN VTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSCYFT TVGFYISSMMVVIIVYVFLYGRLYLALSGLELAIMKQARMRGNTALQAAMGSQSIVQL GLLMALPMFMEIGLERGFRSALGDFIIMQLQLCSVFFTFSLGTKSHYFGRTILHGGAK YKATGRGFVVRHVKFP</aaseq>

Gene Sequence

<dnaseqindica>5684..6053#5332..5561#5144..5256#4713..4796#4509..4624#4302..4421#4099..4210#3634..3823#3478..3546#3269..3394#3067..3176#1867..2018#1676..1799#1496..1590#1239..1362#324..484#145..229#1..62#tttgctcagttgtggaatgaagtgatatgtagtttccgggaagaagatcttataagtgataagtgaggcccctggctcatgtttaggaggaaacatgttatcatttgctcatagcaatgcgtttaatgaacttctgctattcagggaaatggacttactggtggttccttattcgtcagaccccagtcttaaactgatgcagtggccactcttcttgcttgctagcaaggtttggcagaataaaattaaagcttctcttttctcctccttacgttctgtgttcaattgcatgatcgcaatttattttgtgggaaactctgcagatacctatagctttagacatggcagcacaatttcgaccaagagattccgatctttggaaacgtatatgcgcagacgagtatatgaaatgtgctgtactggaatgctacgagtcattcaagcttgttcttaatttactcgtaattggagaaaatgagaaaaggtacattcctatatttttgctcttcccaccattcttgtttctacagtagaaaaggctaatgtgagttgagtaaagaaagaaagcccctagttctttttctgaagtttccttcctttttttcccccattttagtgtcaacataatcttggaaacaactgcttcgatacaaaacagtgaaattagagtatgcccatttttttttcttaaagatatcattaccattatttattactaggttttggtttctatggaactttggtactttggacattaactatttgctctttgcttcaaagctttcaataaagttgggtaactcctttggtcagtaaacagtttcattcttattcttacaaagccaaaattcctttggtcagaaaaatatcagctttatattgatgtgcatgcgagctatcattataatacactgtaagaatagagactggccaattgcatatggcttcacaccatgctatgtccaattagaggacctggatgtccaaattgaactaagaagatgcccaagcatcacagctataaatggagagggataccgtgacagctcataatttgtaaatgtgcaatggctattacgtaggcatttgtgcattcatctttcatgctagctttttttgtttaatttatttttgtttatgcatgttaccttaaaagcatgtatatcttggtattttgcttcaccattctttccccagaatatgttttgcttcacttgtttgttcattgactgctacaggattattggtattatcataaaagaaattgaagctaacatcgcaaagaacacattccttgccaattttagaatgagcgcactgccagtcctgtgcaagaaatttgtggagcttgtatctgccctggtaatacaatgtttactacttctactgaattgtaatactgtatgagaaatgcagtgttgttttgttcagtccttagaacatgtcatttgtcatgtattgaaatattctaagattattttactcacatccacagaaagaaagggatgcctccaaatttgacaatgtagtattgctgcttcaagacatgttagaagtaataacaagagatatgatggtcaatgaaatcaggtgacactttttgtactcaataaaactgactttctttctcatggcaaactggtgagtaatctcttatactacgattcgttcacagagagctagctgagtttggtcatgggaacaaggattctgtaccaagaaggcaactttttgcgggtactggtacaaagcctgcaatcgtctttccacccccaatttcagcacagtgggatgagcaggtcatatcatcaatatcttgtttgtcttttataactaggaaggtgcactaacttcacttgtgtccagatcaagcgtctgtacctccttttgaccgtgaaagaatcagcgatggacgtgcctacaaatcttgaagcccgtcggaggatagcatttttcactaattctttattcatggacatgccacgtgcacctagagtacgcaaaatgctgtcattcaggttagtctcatatatcaacctgctaatggtactgctgtgtttctgcttttatttccatctaaaatgaactctgcagtatttctgtcacgtttcacacatagcacactgcatagagattgtatgtagcatttctagaaaatagaatattgaaaacacgtgttaaaactaaattaacagaacacatggaaaatttggcagcaactaactgatgtttcttccactgtactcctactaaaatatttaatactttaaaaataatcttgtaaagtaaaatttgggtcgagttttggtgtgatcccacctcttaccactgtagttccgtgagtatttggccaactgtcctcgaactgaattcctagtgtgtgctcaccaggaagggggaaataggcattaataccatgcaggaatttgccatgaatgttaggtttttttagctgaagccgttgatgatgcctgacatgaatcaaaattgtgttcattgtttatttaaagctgagttgatcctcaggttcatttcttaaactttatgctattattcgatgtattaattatactgtgcccaacaaataatgcgagcagctactgacctgatgccataattctgttaggctgctttcaatacttggaatttcaacaagcactgcttgcctttgttctgattcatgtcaggcagtccagttaatttgattcactgtgatcttactatgagtctatgagagtagctactctttaatccgatgaaatgatatttataaagttcattgtattcgtccttattatagcatgttttcttgatgataacactactgcaaatcattctaatttgtgaaatatgaaatgtacaaaacgaagtggttgaccatcctgatgcagaccttgtaagccctgtacaacaccaccaggcacatcaacaatgtcgaatctagaaaaagacactgaatttgccacaaatataagccttctatgcttaaatttagcaatgtgtttttacaattttcaacaatgattgtgcattagataattgcatatcacctactgtcctttgcagcgttatgactccatactacagtgaggaaactgtatattcaaggaatgacctcgatctggaaaatgaagatggtgtctcaattatattctacctgcaaaagatttttccaggtctccactcatgttttatttttctttgcacttctaaatatggatacagtcaccaggattctgtcctttactcttcgctattcttgttatagatgaatggaataattttttggaaagaattggttgccaaagagagagtgaagtttggggaaatgaagaaaatgtcctacaacttcgtcattgggcttctcttagagggcagacactctgtagaacaggtgaatcaaactggctgttttatcttacaaaataaggatgattttgttgattccttgttaaatgcttttcttgctgtgaatagttagaggcatgatgtactacaagagagccttgaagcttcaagcttttcttgacatggcttctgagtctggtgagcttcttctctccaagctgagcattccctttctttttgtgccttcataaatatttttgatcttatgccctgtcttgcatgtagagatattggaaggatataaagcagttgcagatccagcagaggaggagaagaaaagccaaagatctctgtcatctcaacttgaggctatagcagacatgaagtttacatatgttgcaacttgccaaatatacggcaatcagaaacaatctggtgatcgacgtgcaaccgatatcttaaacttgatggtgaagtgagtcattttgatgatctattctaaactaataagatatagtaacattttgccatactacaagatacaccatatctatcccctggagcaaaaatgttttcttcttggatttttggagattatatcccttggtttacatttattttggttgatggcatttaactgacaaatacatgatttctaggaaaatattatgcactctgcttgttctattaagaataaatattattttcttttatgagcaaagtaatttcaatctgaacttgaaactgtagttatcctggtttgcgcgtggcatacattgacgaagttgaagagagagacggtgaaaaggtgcagaaggtcttctattcagttttggtaaaagctcttgacaatcatgatcaggtaatcatttccacaaagttgaattaccttgatggcattttgatatgatgtacatctcgatagagcttatttacttttgtatactgtgaaggaaatataccgcataaaattgccaggaccagcaaaattaggtgaaggtaaaccagaaaaccagaatcatgcaattgtctttacacggggtgaagctctccaaacaattgatatgaaccaggtgaattgaacggttgttctaaaaaactgaagagctatgctgccactcaagatatatctaatctgttgcattcttaattatttttaggacaattatttggaggaagctttaaaaatgcggaatttactggaggagtttcacgagaaccatggtgtgcgccagccaacaattcttggtgtgcgtgagcacattttcactggaaggtctggttggatgctttgcagttgttactgaatttacttctaaaaaaatacatatcagtgcctaacatctaatattcttgcattgtagtgtgtcctctctcgcgtggtttatgtcaaaccaggaaacaagctttgtgacaattggacagagagtactagctaatccattgaagtaagtcagcatcggtttattatgtcctgatgagatgaagcggaatccattaatattatgtggaacaatgggattgcggcatgttggaattagcatctgtagcaactgactcaaagtcaaataagttatagatgatttttttggtattatttcaaccgttgaaatgcatatggatatgtgtctgagattaagtaaataagttgtcaaagattaaatcaaccaagtgctatttgtcatcttggccattaagaaaaacatgaagacggtttatagcgtgacacaaaagcaaagggaatcaagtcttatagtcttgatgttgcatatttgacactttattttctgttcagggtacgttttcactacgggcatcctgatgtatttgatagaatttttcacattacacgaggtggcattagcaaggcttcctgtggtataaatttaagtgaagacatttttgctggtatgtgattctccatgtatttctgacttccccatttgtgctgtcggataccataggcttacacttctgttccaggtttcaactcaacactgagacgtggaaatgtcacccaccatgaatacattcaagttggcaaaggacgagatgttggtcttaatcaaatttctctctttgaagctaaagtggcatgtggtaatggagagcaaacactcagcagagacatctatcgcttgggtcaccgctttgactttttccggatgctgtcgtgctactttaccactgttggattttatatcagttcaatggtaagttggtaacttacattgacctagtagagtgaacacaggacaccttcatgcattacattcgttatgatctgctaccatcctttttattctcgtaaggttattgtcttaattttgtgcagatggttgtcataattgtctatgtcttcttgtatggaagactttacctagcattaagtggactcgagttagcaattatgaagcaagcacgaatgagaggtaacactgctcttcaggcggctatggggtctcaatctattgtgcagctaggtcttttgatggccttacccatgtttatggagattggactagaaaggggttttagaagtgccctaggggatttcatcattatgcagcttcagctctgctctgttttcttcactttctcccttggcacaaaatcacattactttggccgcacaattctgcatggtggtgccaaatataaagcgaccggcagaggctttgtagttcgccatgtaaaattccctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0182300, RefSeq:Os06g0182300