BGIOSGA027209

From RiceWiki
Revision as of 17:06, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027209

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027209, complete gene.

LocusTag

OS08G0371900

Ensembl Transcript ID

BGIOSGA027209-TA

Ensembl Protein ID

BGIOSGA027209-PA

Length

3595

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:14353502..14357096

Sequence Coding Region

14356276..14357096,14353502..14355578

Genome Context

<gbrowseImage1> name=IndicaChromosome08:14353502..14357096 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:14353502..14357096 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGGTTTCTGGTGATCGCGGCCACCGGGGCACTCAAGTCCGTGCTGGTGAAGCTCGCCGCCATGGCCGGCGACACGCGCTCCAACGGGGTGCGCGGCCAAATCAGTTTCCTCGCCGACGAGCTCGCCGCCATGCACGCGTTCCTCCTCAGGATGTCGGATTCGGAGGAGGGGAACGCTGACCCTCAGGACAAGGCCTGGATGAGGGAGGTGCGGGAGCTCTCCTACGACATCGAGGACAGCCTCGACGAGTTCATGCTCCATCTAGATGGCGAATCCGCTAATCCAGATGGGTTCATCGACAAATGCAGGAATTTGCTGGCCAAGATCGTGGCGCGGCATCGGATTCCAAAGATGATTGGAGAGTTCAAGGCACAAATCAAACAAGTTGGGGAGAGAAATGCAAGGTACAGGAGCAATGGTGGGATCAGTTTGAGGACAGCCAATGCGACTGTAGACCAAAGAGCTCTTACCATCTTTCAGGATGTGTCATCTCTAGTTGGGGTTGATCAGCCGAAGAAGGAGCTCATCGATCTGTTGATGAAAGATGATGGGCATGTGGCATCCGAGCATCTAAGGATCATCTCCATTGTTGGAATTGGGGGATTAGGGAAGACAACAATCGCAAACCTCGTCTTTGAGGAGCTGAGGGAGCAATTCGATTGTTCTGCTTTTGTGTCTGTGTCAAGAAACCCTGACATCTCTGGAATCTTGAGAATTATTCTCAGTGAAGTTAGCGCCGAACCTTATGGCAACACTGAATCAGGGGACATACAACAACTCATTAGAAAAATCACTACTTCCCTTAAGAACAAAAGGTATCTTATTGTGATTGAGGACTTATGGAATATAGAAAGTTGGAAAATTATTAGATGTGCTTTTTCAAGAAGTATTACTGGCAGCCGAATCATCACAACCACACGTATAAATGAAGTAGCTGAATCTTGCTGCTTCCCACATGTGCATCGGGTATATAAATTAAGGCCTCTTCATTTTGTTGATTCAAAAAGGTTGTTTCTGAAGAGAATTTTTGGTCTGGAGGAATGTCCATCACACCTGACTGAAGTTTGTTGTAACATATTGGCAAAATGTGATGGTTTACCCTTGGCAACTATTGCAATATCCGGTTTATTGGCTACAAAAGCACCGACAGAAGATCAATGGAATCAAGTGGAAAAGTCAATTGGTTATGCATTGGAAAGAAACGAGGATGTCAATGGAATGATAAGGATACTGTCGCTTAGTTACTTTGATCTTCCTCATAACTTGCGTACATGTCTATTATATCTATGTACATTTCCAGAAGATTATATTATTCATAAAAAATGGTTGGTTAGAAGATGGATTGCAGAGGGATTTATTCACGAGGAACATGGACACACTTTATATGAATTGGGGCAGAGGTGTTTCAATGAGCTGATCAATAGAAGTTTGACTGAGCCAAGGTATATTGGCAAGTTCGGTGAGGTGAAATCCTGTCGAGTTCATGATACGATTCTTGATTTCATCCGGTCAAAGTCTATTGAAGAGAACTTCGTAACCTTGTTAGGAATTCCTAACGTTCCTATTGATCGGCAGAAGAAGGTCCGGCGGCTATCCCTCCTTGTTAATACTGAAGAGTATTATAGCGGTTTGGAGGAGAATAACATAAAATATGTCCTGGATAAAAAAGAAGATGATAGCAATGAGCAGGAAGATAACAGTAACGGTTTTCATATCCTAAAAAAGTTGAATTTGTGCAATGCTCGATTGCTAACTATTTTTCCACATTCTGTGAAAGTCCCATCTTTGTTGCAGTTTAGGCGGTTGCGTGTGCTCGACTTTGAAGGCTGTGAGCAGTTAGAAAATCATCACCTTGCAAATATAGAGAATTTATTGCACCTGAAGTACCTCAGCATCAAAGATACAATTGTTAATGTGCTTCCGACTCAAATAACAAGACTACGATATTTACAGACATTGAATGTAGATGTAAGAGGGGCAATTAACATTCCAACACATATTTATCGACTTCGACAACTGACTTATCTACTTGTTGATGTGAGATGTCAACTGCCGGCTAAAATTGGGAACATGCAAGCATTGCAAGAGCTCAAAGTTGTGAATGTGCTTGCGCAGTCACTGAACACGCTGCAAGGACTTGGTAAATTAACCAACCTGAGGAAGCTTAGTATATTTATGCCTGGCCATCACGCTGATGCGGCAGAAAGATACAAGGGTCATATGAAAGCAATGATCTCTTCCATATGTAAGCTAGGCAGAGACAACCTTCATTGTCTAACAATTCATATTTCATCCGTATCAGCAGATGACTTCATCCAGGAACCATGGTGCCCTCCTCCATTGAGTCTTCAAGAACTTGTCATCAATCAGGCGCCAATGTCTAGGGTTCCAAGATGGATTGGCTCACTTGTCAACCTCCAACGATTAGGTTTATATCTGAAGGAACTCTCGCAAGAAGATGTCAGTACACTGGGAGGACTGCCAGCCCTGCTCTCTCTCATACTCTATGTGGAAGAAGTAATTACAGAGGAGGGAGGAAGGCTTAGGATCAGCAGCAGTTATGGATTCCCATCCTTGGAACGTATCCGAATCGGTGGGGAAAGTTGCAGGCTTGAGTTGACTTTTGAAGTTGGGTGCTTGCCAAAGCTACAACAACTGAACCTCGAATGCATGGTAGCAGAAGAAAACCACACCAGCAGCAGTAATGTTGTGTTTGGCATAGAGCATCTGTCCCGCCTCACAAGCGTATATTGCTGTATTCATTACAAGTATGAAACCAGACTGGCCAAGGTGGCTACGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAACCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MEGFLVIAATGALKSVLVKLAAMAGDTRSNGVRGQISFLADELAAMHAFLLRMSDSEEGNADPQDKAWMREVRELSYDIEDSLDEFMLHLDGESANPDGFIDKCRNLLAKIVARHRIPKMIGEFKAQIKQVGERNARYRSNGGISLRTANATVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRIISIVGIGGLGKTTIANLVFEELREQFDCSAFVSVSRNPDISGILRIILSEVSAEPYGNTESGDIQQLIRKITTSLKNKRYLIVIEDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKWLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLTEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSGLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLRVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLRYLQTLNVDVRGAINIPTHIYRLRQLTYLLVDVRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSVSADDFIQEPWCPPPLSLQELVINQAPMSRVPRWIGSLVNLQRLGLYLKELSQEDVSTLGGLPALLSLILYVEEVITEEGGRLRISSSYGFPSLERIRIGGESCRLELTFEVGCLPKLQQLNLECMVAEENHTSSSNVVFGIEHLSRLTSVYCCIHYKYETRLAKVATLAALERSIISHPNQPTFTKEEYGDFVDESC</aaseq>

Gene Sequence

<dnaseqindica>1..821#1519..3595#ATGGAGGGGTTTCTGGTGATCGCGGCCACCGGGGCACTCAAGTCCGTGCTGGTGAAGCTCGCCGCCATGGCCGGCGACACGCGCTCCAACGGGGTGCGCGGCCAAATCAGTTTCCTCGCCGACGAGCTCGCCGCCATGCACGCGTTCCTCCTCAGGATGTCGGATTCGGAGGAGGGGAACGCTGACCCTCAGGACAAGGCCTGGATGAGGGAGGTGCGGGAGCTCTCCTACGACATCGAGGACAGCCTCGACGAGTTCATGCTCCATCTAGATGGCGAATCCGCTAATCCAGATGGGTTCATCGACAAATGCAGGAATTTGCTGGCCAAGATCGTGGCGCGGCATCGGATTCCAAAGATGATTGGAGAGTTCAAGGCACAAATCAAACAAGTTGGGGAGAGAAATGCAAGGTACAGGAGCAATGGTGGGATCAGTTTGAGGACAGCCAATGCGACTGTAGACCAAAGAGCTCTTACCATCTTTCAGGATGTGTCATCTCTAGTTGGGGTTGATCAGCCGAAGAAGGAGCTCATCGATCTGTTGATGAAAGATGATGGGCATGTGGCATCCGAGCATCTAAGGATCATCTCCATTGTTGGAATTGGGGGATTAGGGAAGACAACAATCGCAAACCTCGTCTTTGAGGAGCTGAGGGAGCAATTCGATTGTTCTGCTTTTGTGTCTGTGTCAAGAAACCCTGACATCTCTGGAATCTTGAGAATTATTCTCAGTGAAGTTAGCGCCGAACCTTATGGCAACACTGAATCAGGGGACATACAACAACTCATTAGAAAAATCACTACTTCCCTTAAGAACAAAAGGTATGCAAAATTCTAACCGTCAATCATATATTCTTGTCTCCAAAATATATGGTGTGTGTATTATAAGGACAGACCTTCAAGATTTTAAGCCTTTAGTTCATTCTTTGCCGGTCCAACTTGCTAAGTAGTCCGTGTTTTCTTTTACTTGCATTCAGCTCTCTTATGTGCATACCATTCTGCTTTTCAGATTTTATTTACAAATATAGGTTTGAACCATAGCAAAAAGTTGAGCAAAAATCATTCGAGGACATAGTCTTGCCAAACATGAAAACTTCTCACTTTCATTATGATTTTTTAATAAAGTATCCATAAGGGACACATTTCACCTAACAAAAATATTGTTTTTGACAAGAGGGACCAGATTCTTGGCTGTTGAATGAATTATGGTTTAGCTGATTCATTAGTGGATGGAGTCTGAGAACTACCCGCCTTGTTACATTTCTTTAATCAAATATCCATGTGCTATAAGTGTTACAACCATAGCTACAATCATGCAAAATCAGTAACAATGAGGACACATTTCACCTAACTGAGACATGATTTAGAGAAGCGAGACCAGATTTGTGTTAATTTAACAAGTCAGCTTTAGTTGAATTATTCTAGGACGACATGAGACCAAAATGGGAAAAATATCCCCCTTTCTAACATTTATTAGATCAAATATTTCTACTGATGCTTGTAATAAAAAAATTGGCAGGTATCTTATTGTGATTGAGGACTTATGGAATATAGAAAGTTGGAAAATTATTAGATGTGCTTTTTCAAGAAGTATTACTGGCAGCCGAATCATCACAACCACACGTATAAATGAAGTAGCTGAATCTTGCTGCTTCCCACATGTGCATCGGGTATATAAATTAAGGCCTCTTCATTTTGTTGATTCAAAAAGGTTGTTTCTGAAGAGAATTTTTGGTCTGGAGGAATGTCCATCACACCTGACTGAAGTTTGTTGTAACATATTGGCAAAATGTGATGGTTTACCCTTGGCAACTATTGCAATATCCGGTTTATTGGCTACAAAAGCACCGACAGAAGATCAATGGAATCAAGTGGAAAAGTCAATTGGTTATGCATTGGAAAGAAACGAGGATGTCAATGGAATGATAAGGATACTGTCGCTTAGTTACTTTGATCTTCCTCATAACTTGCGTACATGTCTATTATATCTATGTACATTTCCAGAAGATTATATTATTCATAAAAAATGGTTGGTTAGAAGATGGATTGCAGAGGGATTTATTCACGAGGAACATGGACACACTTTATATGAATTGGGGCAGAGGTGTTTCAATGAGCTGATCAATAGAAGTTTGACTGAGCCAAGGTATATTGGCAAGTTCGGTGAGGTGAAATCCTGTCGAGTTCATGATACGATTCTTGATTTCATCCGGTCAAAGTCTATTGAAGAGAACTTCGTAACCTTGTTAGGAATTCCTAACGTTCCTATTGATCGGCAGAAGAAGGTCCGGCGGCTATCCCTCCTTGTTAATACTGAAGAGTATTATAGCGGTTTGGAGGAGAATAACATAAAATATGTCCTGGATAAAAAAGAAGATGATAGCAATGAGCAGGAAGATAACAGTAACGGTTTTCATATCCTAAAAAAGTTGAATTTGTGCAATGCTCGATTGCTAACTATTTTTCCACATTCTGTGAAAGTCCCATCTTTGTTGCAGTTTAGGCGGTTGCGTGTGCTCGACTTTGAAGGCTGTGAGCAGTTAGAAAATCATCACCTTGCAAATATAGAGAATTTATTGCACCTGAAGTACCTCAGCATCAAAGATACAATTGTTAATGTGCTTCCGACTCAAATAACAAGACTACGATATTTACAGACATTGAATGTAGATGTAAGAGGGGCAATTAACATTCCAACACATATTTATCGACTTCGACAACTGACTTATCTACTTGTTGATGTGAGATGTCAACTGCCGGCTAAAATTGGGAACATGCAAGCATTGCAAGAGCTCAAAGTTGTGAATGTGCTTGCGCAGTCACTGAACACGCTGCAAGGACTTGGTAAATTAACCAACCTGAGGAAGCTTAGTATATTTATGCCTGGCCATCACGCTGATGCGGCAGAAAGATACAAGGGTCATATGAAAGCAATGATCTCTTCCATATGTAAGCTAGGCAGAGACAACCTTCATTGTCTAACAATTCATATTTCATCCGTATCAGCAGATGACTTCATCCAGGAACCATGGTGCCCTCCTCCATTGAGTCTTCAAGAACTTGTCATCAATCAGGCGCCAATGTCTAGGGTTCCAAGATGGATTGGCTCACTTGTCAACCTCCAACGATTAGGTTTATATCTGAAGGAACTCTCGCAAGAAGATGTCAGTACACTGGGAGGACTGCCAGCCCTGCTCTCTCTCATACTCTATGTGGAAGAAGTAATTACAGAGGAGGGAGGAAGGCTTAGGATCAGCAGCAGTTATGGATTCCCATCCTTGGAACGTATCCGAATCGGTGGGGAAAGTTGCAGGCTTGAGTTGACTTTTGAAGTTGGGTGCTTGCCAAAGCTACAACAACTGAACCTCGAATGCATGGTAGCAGAAGAAAACCACACCAGCAGCAGTAATGTTGTGTTTGGCATAGAGCATCTGTCCCGCCTCACAAGCGTATATTGCTGTATTCATTACAAGTATGAAACCAGACTGGCCAAGGTGGCTACGCTGGCTGCATTGGAGAGATCAATCATCAGCCATCCCAACCAACCCACATTTACAAAGGAGGAATATGGTGATTTTGTAGATGAGTCCTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027209