Os06g0186300

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0186300| Description = Protein kinase-like domain containing protein| Version = NM_001063543.2 GI:297605327 GeneID:4340343| Length = 6814 b...")
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Gene Name

Os06g0186300

Description

Protein kinase-like domain containing protein

Version

NM_001063543.2 GI:297605327 GeneID:4340343

Length

6814 bp

Definition

Oryza sativa Japonica Group Os06g0186300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4334979..4341792

Sequence Coding Region

4334979..4335074,4335173..4335536,4338321..4338774,4339179..4341792

Expression

GEO Profiles:Os06g0186300

Genome Context

<gbrowseImage1> name=NC_008399:4334979..4341792 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4334979..4341792 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaacttgctcctcatcccaatcatcatctgctacctcgtgccgatcgctgtcgccgtcgacgcaccaccaccagtaatggcggccgccgctgtcgccgacgactggtctgcgctgctcgctttcttgtccaatgtgtcggccgattccggtggtgtcgctctcgccgactggggacgctcgccggagttctgcaactggacgggcgtggtgtgcggcggcggcgagcggcggcgggtcacgcagctggtgctcgccgggcgtgggctccgcggcgtggtgtcgccggcgctggggcggctggagttcgtcacggttcttgatctctcgaacaatggtttctccggcgagataccggcggagctcgcgtcgctgtcgaggctgacgcagctgagcctgacgggcaaccgcctcgagggcgccatccccgccggcatcgggctgctccggcggctctacttcctcgacctcagcggcaaccgcctctccggcggcatcccggcgacgctgttctgcaactgcaccgcgctgcagtacgtcgacctcgccaacaactccctcgccggcgacatcccgtactccggcgagtgccgcctccccagcctccgctacctcctcctctggtcgaacgacctctccggcctgatcccgccggcgctgtcgaactcctccttgctcgagtgggtcgacttcgagtcgaactacctcgccggcgagctgccgccgcaggtgttcgacaggttgccgcggctccagtatctctacctctcgtacaacaacctgtccagccatggcggcaacaccgacctcgcccccttcttccgctccttgacgaattgcacgcgcttgcaggagctcgagctcgccggcaacgacctcggcggcgagctcccggcgttcgtcggcgagctctcgcgcgagttccggcaaatccacctcgaggacaacgccatcacgggcgcgatcccgcccagcatcgccggcctcgtcaacctcacctacctcaacctctccaataacatgctcaatggctcgatcccgccggagatgtcgcggctgcggcggctcgagcggctttacctctccaacaacctcctcgccggcgagatcccgcgatccatcggcgagatgccgcacctcggcctcgtcgacctctccggcaaccggctcgccggcaccatcccggacacgttctccaacctgacgcagctgaggcggctaatgctgcaccacaaccacctctccggcgatgttccagcgagcctcggcgactgcctgaaccttgagatcttggacctctcctacaatggcttgcaggggcggatccctccgcgcgtcgccgccatgagcggcctcaagctgtacctgaacctgtcgaacaaccacctcgaggggcctctccccctcgagctcggcaagatggacatggtcctggcgctcgacctgtcggagaacgcgctcgccggcgcggtcccggcgcagctcggcggttgcgtcgcgctcgagtacctcaacctgtcgggcaacgcgctgcgcggcgcgctcccggcgcccgtcgcggcgctcccgttcctgcaggtgctcgacgtgtcgcgcaaccggctctccggcgagctgcctgtgtcctccctgcaggcgtcgacgtcgctacgggacgcgaacttctcctgcaacaacttctccggcgcggtgccgcgcggcgccggcgtgctcgcgaacctctcggcggcggcgttccgaggcaaccccggcctatgcgggtacgtccccggcattgccgcgtgcggggcggcgacggcgagacgcacgcgccaccgccgcgcggtgctccccgccgtcgtcggcatcgtcgccgccgtgtgcgccatgctgtgcgcggtggtgtgccggtcgatggcggcggcgagagcgaagcggcagtcggtccggctcgtcgacgtcgaggactaccaggcggcggcggagagggagcacccgaggatatcgtaccgggagctcgccgaggccaccggcggcttcgtccagtcgagcctgatcggcgccgggcggttcgggcgcgtctacgaggggacgctccgcggcggcgcgcgcgtcgccgtgaaggtgctcgacccgaagggcggcggcgaggtctccggcagcttcaagcgggagtgcgaggtgctccggcgaacccggcacaagaacctcgtcagggtgatcaccacctgcagcacggccaccttccacgcgctcgtcctcccgctcatgccgcacggcagcctcgagggccacctctacccgccggagcgcggcgccggcggcggcgccggcggcggcgacgggctggacttcgggcggctgatgagcgtcgtgagcgacgtcgcggaggggctcgcgtacctgcaccactacgcgccggtgagggtggtgcactgcgacctcaagcccagcaacgtcctcctcgacgacgacatgcgcgccgtgatctccgacttcggcatcgccaagctcatctccggcgccgccgccgccgtcggagacggcggcgccagcagcacgagcgacgagtccgcaccgtgcaactccatcaccggactcttgcaaggctcggtcggatacatcgcgcctgaatatggattaggagggcatccatctcgacagggtgacgtgtacagcttcggcgtgatgatactcgagctgatcaccgggaagaggccgaccgacgtcatcttccacgagggcctcacgctgcacgactgggtcaggcgacactacccgcacgacgtcgccgccgtcgtcgcgcacgcgccgtggcgccgggaggcgccgtcgccgatgtcgacggcggcgtcgccggcggcggccgacgtggccgccgtcgagctcatcgagctcgggctcgtgtgcacgcagcactcgccggcgctgcggccgagcatggtggacgtctgccacgagatcacgttgctcaacgaggctatcaggaggcacgccgccgccgccgccgccatcgccgccgccaccgacgaggacgaggacgacgacgacggcaggtcgttgtcgacgaccaaggacgactcgctcgctgcccagactctccttgtgtatctacatgctgcgaggaggtgcagggctgtttcctgggtccgacgacataaggggcaaatggaaccgtttggccaacctcttgtcgccagcttgtcagaggtccagactctattttggatgattagccaggcgaaggtcttgcacttatgcggcgcccaggctttccagattagcctgttgaagttggtagcggtggttccaagaagttgtgcgttatatgccgatgctgtcgtgtactcgcccatggttagtaagcttccatattatattgtcctcctcgtgctctaccaggtgtatagcctgaacagcgctccaaaccccgacaagttgatcaatcaggctacgtatacaagcggcgcaacatccttcaatctcctcccctgcgtccaggccgattctcagaagcttattttggcaccaatagtaatcagttag</cdnaseq>

Protein Sequence

<aaseq>MANLLLIPIIICYLVPIAVAVDAPPPVMAAAAVADDWSALLAFL SNVSADSGGVALADWGRSPEFCNWTGVVCGGGERRRVTQLVLAGRGLRGVVSPALGRL EFVTVLDLSNNGFSGEIPAELASLSRLTQLSLTGNRLEGAIPAGIGLLRRLYFLDLSG NRLSGGIPATLFCNCTALQYVDLANNSLAGDIPYSGECRLPSLRYLLLWSNDLSGLIP PALSNSSLLEWVDFESNYLAGELPPQVFDRLPRLQYLYLSYNNLSSHGGNTDLAPFFR SLTNCTRLQELELAGNDLGGELPAFVGELSREFRQIHLEDNAITGAIPPSIAGLVNLT YLNLSNNMLNGSIPPEMSRLRRLERLYLSNNLLAGEIPRSIGEMPHLGLVDLSGNRLA GTIPDTFSNLTQLRRLMLHHNHLSGDVPASLGDCLNLEILDLSYNGLQGRIPPRVAAM SGLKLYLNLSNNHLEGPLPLELGKMDMVLALDLSENALAGAVPAQLGGCVALEYLNLS GNALRGALPAPVAALPFLQVLDVSRNRLSGELPVSSLQASTSLRDANFSCNNFSGAVP RGAGVLANLSAAAFRGNPGLCGYVPGIAACGAATARRTRHRRAVLPAVVGIVAAVCAM LCAVVCRSMAAARAKRQSVRLVDVEDYQAAAEREHPRISYRELAEATGGFVQSSLIGA GRFGRVYEGTLRGGARVAVKVLDPKGGGEVSGSFKRECEVLRRTRHKNLVRVITTCST ATFHALVLPLMPHGSLEGHLYPPERGAGGGAGGGDGLDFGRLMSVVSDVAEGLAYLHH YAPVRVVHCDLKPSNVLLDDDMRAVISDFGIAKLISGAAAAVGDGGASSTSDESAPCN SITGLLQGSVGYIAPEYGLGGHPSRQGDVYSFGVMILELITGKRPTDVIFHEGLTLHD WVRRHYPHDVAAVVAHAPWRREAPSPMSTAASPAAADVAAVELIELGLVCTQHSPALR PSMVDVCHEITLLNEAIRRHAAAAAAIAAATDEDEDDDDGRSLSTTKDDSLAAQTLLV YLHAARRCRAVSWVRRHKGQMEPFGQPLVASLSEVQTLFWMISQAKVLHLCGAQAFQI SLLKLVAVVPRSCALYADAVVYSPMVSKLPYYIVLLVLYQVYSLNSAPNPDKLINQAT YTSGATSFNLLPCVQADSQKLILAPIVIS</aaseq>

Gene Sequence

<dnaseqindica>6719..6814#6257..6620#3019..3472#1..2614#atggccaacttgctcctcatcccaatcatcatctgctacctcgtgccgatcgctgtcgccgtcgacgcaccaccaccagtaatggcggccgccgctgtcgccgacgactggtctgcgctgctcgctttcttgtccaatgtgtcggccgattccggtggtgtcgctctcgccgactggggacgctcgccggagttctgcaactggacgggcgtggtgtgcggcggcggcgagcggcggcgggtcacgcagctggtgctcgccgggcgtgggctccgcggcgtggtgtcgccggcgctggggcggctggagttcgtcacggttcttgatctctcgaacaatggtttctccggcgagataccggcggagctcgcgtcgctgtcgaggctgacgcagctgagcctgacgggcaaccgcctcgagggcgccatccccgccggcatcgggctgctccggcggctctacttcctcgacctcagcggcaaccgcctctccggcggcatcccggcgacgctgttctgcaactgcaccgcgctgcagtacgtcgacctcgccaacaactccctcgccggcgacatcccgtactccggcgagtgccgcctccccagcctccgctacctcctcctctggtcgaacgacctctccggcctgatcccgccggcgctgtcgaactcctccttgctcgagtgggtcgacttcgagtcgaactacctcgccggcgagctgccgccgcaggtgttcgacaggttgccgcggctccagtatctctacctctcgtacaacaacctgtccagccatggcggcaacaccgacctcgcccccttcttccgctccttgacgaattgcacgcgcttgcaggagctcgagctcgccggcaacgacctcggcggcgagctcccggcgttcgtcggcgagctctcgcgcgagttccggcaaatccacctcgaggacaacgccatcacgggcgcgatcccgcccagcatcgccggcctcgtcaacctcacctacctcaacctctccaataacatgctcaatggctcgatcccgccggagatgtcgcggctgcggcggctcgagcggctttacctctccaacaacctcctcgccggcgagatcccgcgatccatcggcgagatgccgcacctcggcctcgtcgacctctccggcaaccggctcgccggcaccatcccggacacgttctccaacctgacgcagctgaggcggctaatgctgcaccacaaccacctctccggcgatgttccagcgagcctcggcgactgcctgaaccttgagatcttggacctctcctacaatggcttgcaggggcggatccctccgcgcgtcgccgccatgagcggcctcaagctgtacctgaacctgtcgaacaaccacctcgaggggcctctccccctcgagctcggcaagatggacatggtcctggcgctcgacctgtcggagaacgcgctcgccggcgcggtcccggcgcagctcggcggttgcgtcgcgctcgagtacctcaacctgtcgggcaacgcgctgcgcggcgcgctcccggcgcccgtcgcggcgctcccgttcctgcaggtgctcgacgtgtcgcgcaaccggctctccggcgagctgcctgtgtcctccctgcaggcgtcgacgtcgctacgggacgcgaacttctcctgcaacaacttctccggcgcggtgccgcgcggcgccggcgtgctcgcgaacctctcggcggcggcgttccgaggcaaccccggcctatgcgggtacgtccccggcattgccgcgtgcggggcggcgacggcgagacgcacgcgccaccgccgcgcggtgctccccgccgtcgtcggcatcgtcgccgccgtgtgcgccatgctgtgcgcggtggtgtgccggtcgatggcggcggcgagagcgaagcggcagtcggtccggctcgtcgacgtcgaggactaccaggcggcggcggagagggagcacccgaggatatcgtaccgggagctcgccgaggccaccggcggcttcgtccagtcgagcctgatcggcgccgggcggttcgggcgcgtctacgaggggacgctccgcggcggcgcgcgcgtcgccgtgaaggtgctcgacccgaagggcggcggcgaggtctccggcagcttcaagcgggagtgcgaggtgctccggcgaacccggcacaagaacctcgtcagggtgatcaccacctgcagcacggccaccttccacgcgctcgtcctcccgctcatgccgcacggcagcctcgagggccacctctacccgccggagcgcggcgccggcggcggcgccggcggcggcgacgggctggacttcgggcggctgatgagcgtcgtgagcgacgtcgcggaggggctcgcgtacctgcaccactacgcgccggtgagggtggtgcactgcgacctcaagcccagcaacgtcctcctcgacgacgacatgcgcgccgtgatctccgacttcggcatcgccaagctcatctccggcgccgccgccgccgtcggagacggcggcgccagcagcacgagcgacgagtccgcaccgtgcaactccatcaccggactcttgcaaggctcggtcggatacatcgcgcctggtacgtgcacgtcgcatgcatccatgcatccattcacacaacttttttgcaattaacttgcacttatctcaccatcttattactaatcggaattgtgcatgtattctgagaaaaaaaaaactttcgaacgttactatagtgtatactatagctgtagtaattataatatgattatactatagttatattataactatattataactataatatagttatattatagtgtaattgtactataactatattgtaatatctatataagttacatataaaattatatatacaaattatattatagttgtagtgaaattatatcacagatacatatatatttagatttgaaagtttttcagttttttaagatagtcccttactaattacgtgtttgattttgtgattagaatatggattaggagggcatccatctcgacagggtgacgtgtacagcttcggcgtgatgatactcgagctgatcaccgggaagaggccgaccgacgtcatcttccacgagggcctcacgctgcacgactgggtcaggcgacactacccgcacgacgtcgccgccgtcgtcgcgcacgcgccgtggcgccgggaggcgccgtcgccgatgtcgacggcggcgtcgccggcggcggccgacgtggccgccgtcgagctcatcgagctcgggctcgtgtgcacgcagcactcgccggcgctgcggccgagcatggtggacgtctgccacgagatcacgttgctcaacgaggctatcaggaggcacgccgccgccgccgccgccatcgccgccgccaccgacgaggacgaggacgacgacgacggcaggtcgttgtcgacgaccaaggacgactcgctgttctccaattaattaacacctaattagccacgagaaacttctcgtcacaatcctcatttcgccattgttaatattattgagacctttgagaaggatcggagaaatcactagtgcttccttctcgtagcgcatttgagttagctctcatgatctctaatcatctctgccttggtagggaatgtgattagtatattggtttattggatggttaggggatcgcctactaactagtgctaaattctttctgttattaattcatcaatggaagctgcactcgattaatctgttcatgttgcaaacatgtcggactccattagcaaccggccatgcatatacttgaataagaacaacgtacagctgaaggaggaagagaaatggatcttgatcagttaggtcattattcaggtgctaatgatcaaacataaacaaatccaaatgctgcaaaagtcgtcactgttcgatgcatctgatgatatcatgctgtcttccaattcaccacccagcaatgtagtttaattttgttcttgatttgacaagaacttccatgctactgccagatttttttaggcttttcaattagcacgcttgctggcttttagtcaggttcaggattagcagaaagcgactgacacacaatatactggttttactcatgaattaaagattgtttttgagagatatgaattgaagattgttacctgaagcattttaggttttaaattgctagtgtttgtggggttttgacctgaatatataaaacctagtggcgactttgcaaagtgttctgcatccatgagcttttggacttttatgttctagtagtcagacttttatatcaggatattgtaagatgtgtaagaaagggtaaggcaatgtagttcaaagtgtgatcttgtgtttatatgttcatacttactctgactagtgaccttacatcatttcattaacttaaactgaaagaacaaagtactgaagatatgtagtcaatggcaggaaatacaagatgatctctgcaaggtaaagagccttaaagaactgaacaatattgtgggcatgcacacatgacagatcatgcataataataagatagtataaattacaattgttgttgcagtcttgcaggcagatcagcaataagcaaagattgatgtgatggtaactaagatctagctagataaaggtgtgagtgacttctcattcatgttgcaattgcgtaccaaactggcagtatgacgcattttggttgatttgtttgctcctctttatcatacaaaagatgctgttccactggcttttctttgcaaaagaaaactgcagacaaaaacaaaacaaaagaaaaggttacaggtcttccatttcagagtgtgatccatctaatgatctgaatcagatgatggtagctttagtgctttccttgcatgtcttatcatgttaccttccaatttggaattacctatatatagttcttcaaggtttaatccttactcttaattattcacaacaacaaaaccttcctagaagtaccaaatattatcactaaagtagtactagctaggacacatgcactcgatgtcgggtgtgttcggaacacctggtttccaacacgaagtacccacacagaaaacggagcggtctattagcgcgtgattaattaagtattagctatttttttaaaatggattaatttgattttttaagaaactttcgtataaaaactttttaaaaaaaacacaccgtttagcagtttgaaaagcgttcacgcggaaaacgagagaaataggttggtaagaaggggcgccgaacacataaactagttttctacaagagatgttttataatggtctttgctggtagtataattaatctaaattatttatgctttctaatccaatgatcatatttttatactattatcttaactactaatagtagaataatttttgaactggtagtaaagctcatacatcaatagttgagttcacttctactagtgataattttgacattagaatattattagttctttaagatttaatgtctactcttaattattcacaacaacaaaagctttagaaccaccaaatttatcactaaagaagtgaatacataggatacatcactcaagagcttaaactagtttcccatgaatactacccaataattagctttcctgttcagtttaagatcgacaaactggtccgaagaatattgacgaagataatccactaaattaaaactaatatcctaaatcgaaatgctaatttaatcatatactaactacgttaaaataatcaactatgtttatgtttcgtaccagttatattagctttgtctatgagaagcattaatggactgtgatttattactataacttcttaaaacgatagtaatcagttttttttaacgaatcaacgagcgccaatttcattgaatagagaaggagaactttacaaagcgaaaggaaaaaagaaaggagctaggacctttggtccgagctaactaaaagaaagccagctattaagacttatcgctcctgctaagacccaagttttggcctcttccttaatcttggctaaaagggaggtagctgaaagctccttctgttggaaggttctacgattcctttcgttccatatcttccaggcgaccaacaacatcaaagtgcggagtgtcttcttaggtgtctcttgtatatttgcggtagcctcccaccaatctagcaccgttgaagtttgcctccattggctaggatttagttgctcgcacgttacccactccgctagcgctgcccagactctccttgtgtatctacatgctgcgaggaggtgcagggctgtttcctgggtccgacgacataaggggcaaatggaaccgtttggccaacctcttgtcgccagcttgtcagaggtccagactctattttggatgattagccaggcgaaggtcttgcacttatgcggcgcccaggctttccagattagcctgttgaagttggtagcggtggttccaagaagttgtgcgttatatgccgatgctgtcgtgtactcgcccatggttagtaagcttccatattatattgtcctcctcgtgctctaccaggtgtatagcctgaacagcgctccaaaccccgacaagttgatcaatcaggtctgtcgttcagcccgcagtccctggcaggtccaagtcaagaagccattggttcgcttgcaaagcctgttgaagcgttctgttctttttttttggaggctacgtatacaagcggcgcaacatccttcaatctcctcccctgcgtccaggccgattctcagaagcttattttggcaccaatagtaatcagttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186300, RefSeq:Os06g0186300