Os06g0186900

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Revision as of 09:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0186900| Description = AAA ATPase domain containing protein| Version = NM_001063548.1 GI:115466827 GeneID:4340348| Length = 3519 bp| Defin...")
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Gene Name

Os06g0186900

Description

AAA ATPase domain containing protein

Version

NM_001063548.1 GI:115466827 GeneID:4340348

Length

3519 bp

Definition

Oryza sativa Japonica Group Os06g0186900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4387234..4390752

Sequence Coding Region

4387436..4388078,4389824..4390611

Expression

GEO Profiles:Os06g0186900

Genome Context

<gbrowseImage1> name=NC_008399:4387234..4390752 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4387234..4390752 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagctgaagcggctgtcggagagccgcgacctgacgcggatcgagcgcatcggggcgcactcccacatccgggggctggggctggactcctcgctggaggcccgcggctcgtcggaggggatggtcgggcagctccccgcgcggcgcgccgcggggctcatcctgcagctcatccgccaggggaagatcgccggccgcgccgtgctcctcgccggccagcccgggaccgggaagaccgccctcgccatgggcatcgccaagtccctcggcgccgagacgcccttcgcctccgtcgccgcgtccgagctcttctccctcgacctctccaagaccgaggcgctcacccaggccttccgccgctccatcggcgtccgcatcaaggaggaggcggagatcatcgagggcgaggtcgttgagatctcgatcgaccgccccgtctccgccgcagccgccgccggcagctccgcgccttccggtgtcgccgcggctggcaagaccgggcgcctcacgctcaagaccacggacatggagaccgtgtacgagctcggcggcaagatgattgaggccctggggaaggagaaggtgcagagcggggatgtggttgcgctcgacaaggcctccgggaaggtgaccaagcttggccgctcaatcgggaggtcgcgggattacgatgctgttggtcctcacaccaagttcgtcaagtgccccgagggcgagctccagaagcgcaaggaggtcgtgcattgtgtcaccttacatgaaattgatgtcatcaatagccggacacaaggttttcttgcacttttcactggtgacactggtgaaattcgtgcagaggttcgagagcagattgatacaaaagttgctgagtggagggaggaagggaaggctgagattgtccctggtgttctgtttattgatgaagtccacatgctagatatcgaatgcttctccttcctaaaccgtgcattggaaaatgacatggctccaattctagtcattgcaactaaccgagggatcacatccatacgtgggacaaactaccgatcaccacatgggataccacctgatttccttgatcgtctgttaatcatcacgacacagccttacaccgaggatgatatccggaagatcctagacatcaggtgcgatgaagaagatgtggaaatgtctgcagatgctaaggttttgctcacaaagataggagtggagacgtccctgaggtatgctatccacctgatcacttcggctgcattagcttgccagaaacgcaagggtaaggttgtggagatggaggatataagcagggtctaccagctgttcctggacgtcaagagatcgacgcagtacttgatggagtatcagagccagtacatgttcaatgaagtgccgggtgaagcaggagatgatgccatgcagtcttag</cdnaseq>

Protein Sequence

<aaseq>MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSLEARGSSEGMV GQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASVAA SELFSLDLSKTEALTQAFRRSIGVRIKEEAEIIEGEVVEISIDRPVSAAAAAGSSAPS GVAAAGKTGRLTLKTTDMETVYELGGKMIEALGKEKVQSGDVVALDKASGKVTKLGRS IGRSRDYDAVGPHTKFVKCPEGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTG EIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHMLDIECFSFLNRALENDMAPIL VIATNRGITSIRGTNYRSPHGIPPDFLDRLLIITTQPYTEDDIRKILDIRCDEEDVEM SADAKVLLTKIGVETSLRYAIHLITSAALACQKRKGKVVEMEDISRVYQLFLDVKRST QYLMEYQSQYMFNEVPGEAGDDAMQS</aaseq>

Gene Sequence

<dnaseqindica>2675..3317#142..929#atatccatccactcaacccaacccaagctggctggcaaaaccctagaactcgttccccccctttcgccttaaaccttcttctcttttagtaccctcgggaagccaaaagcacctcgtcggcggcggcggcgggtggtggccatggcggagctgaagcggctgtcggagagccgcgacctgacgcggatcgagcgcatcggggcgcactcccacatccgggggctggggctggactcctcgctggaggcccgcggctcgtcggaggggatggtcgggcagctccccgcgcggcgcgccgcggggctcatcctgcagctcatccgccaggggaagatcgccggccgcgccgtgctcctcgccggccagcccgggaccgggaagaccgccctcgccatgggcatcgccaagtccctcggcgccgagacgcccttcgcctccgtcgccgcgtccgagctcttctccctcgacctctccaagaccgaggcgctcacccaggccttccgccgctccatcggcgtccgcatcaaggaggaggcggagatcatcgagggcgaggtcgttgagatctcgatcgaccgccccgtctccgccgcagccgccgccggcagctccgcgccttccggtgtcgccgcggctggcaagaccgggcgcctcacgctcaagaccacggacatggagaccgtgtacgagctcggcggcaagatgattgaggccctggggaaggagaaggtgcagagcggggatgtggttgcgctcgacaaggcctccgggaaggtgaccaagcttggccgctcaatcgggaggtcgcgggattacgatgctgttggtcctcacaccaagttcgtcaagtgccccgagggcgagctccagaagcgcaaggaggtcgtgcattgtgtcaccttacatgaaattgatgtcatcaatagccggtaatttcacattcccttcccaaaaattcgtccattactggagtagatatttcatactacctgacaagaaatctacattgaagtatttaatcattttggcatagtagagaactacatattaaagggcgtttgttatcacatcttactgcaacgagtaagcggacaaaagtgaagtctctgtcagctttggtatcactcaactgaaaaatagatacaagtgaaataaccaactgaagtatttcaaattctatcagctctggtatttcacattgactttcagttaccctggacatatgtgctgtgtgcttgcttgtatgttaattatccaggtgatagcttagccaccaaagtttctttttcagtcttgaaaaatctgttccagcgtttgcacacaaaggatcacttgtcagcttgtcgctccaaattccaaattaaggactgccttacaatcttgtattttgcttctgagcctgaatggaaaataatttctgtgtcgtgtatctgcagtgatcagaatcacataataaatttgaaatcggttaatcttgcttagctgccttacactgtgaccatgctctttgcacggaagtccctgcattatactgtacaacccctgtcccattctcagcaccacccaaatcctattgaatgacgctggaactagatcaaagggttgagcattcctgcattagcaaaattggccaaaccatagctaaccatagtgttccagtgactacgtcgcacctagtcatctcattcattcacctgcagacatgtaaaatgcgggttgacagaactcggttaaactggatttggacagccctagttggatcagtttctccctactaagtgccgcatccacacagttagccaatactaagaaaatatggtctactgactactggatggcatatatgatcttgttgggcttggagctgaaatacaattcagctgcccaaatcagatctaatttttcttttggcccgtagagaaataacaatagagagcagcctcctgttgtaactcttgtgaaagaaaggacctgcacgatgttgctagaggacataatgtgatgaaaattagtcaagcctaatggtactttggatagcttagcaattactccctccgggttgataatacttgtcattttggacaagggcacagtgtacaaaaaacaactttgaccattatttttcattataatatgtataaaagtgttaacaaatatatgattttattaaagtgctttttaagactaatctatccatgtggtggtcaccatatttgaaagaaaaatattttaaaaatgattcataatcaaagattctaaagtttgacatcacccttgtctaaaacgacaagtattatcagcccagagggagtatcatgtgcacataaatgaaccatgttccaagacaaggtacatgaatatgcttcaactagtttgaaatcatgaactgatcgtgattgtgatgtgttctgtctccctctcctctctctctctctctctaagtatgttatcagccaaacaactatctgatgtgttctaaatagtattctttggtgaatctttttgaacattccattttttaatcaccaaaaatctaacttataactggcttggtagttttttggtcattagaccaagattattggctttcagatgtggttttctacctaccataaaaattaagtgagactatctttgcacaaactcatttttgttttttgttattgctgtccaggacacaaggttttcttgcacttttcactggtgacactggtgaaattcgtgcagaggttcgagagcagattgatacaaaagttgctgagtggagggaggaagggaaggctgagattgtccctggtgttctgtttattgatgaagtccacatgctagatatcgaatgcttctccttcctaaaccgtgcattggaaaatgacatggctccaattctagtcattgcaactaaccgagggatcacatccatacgtgggacaaactaccgatcaccacatgggataccacctgatttccttgatcgtctgttaatcatcacgacacagccttacaccgaggatgatatccggaagatcctagacatcaggtgcgatgaagaagatgtggaaatgtctgcagatgctaaggttttgctcacaaagataggagtggagacgtccctgaggtatgctatccacctgatcacttcggctgcattagcttgccagaaacgcaagggtaaggttgtggagatggaggatataagcagggtctaccagctgttcctggacgtcaagagatcgacgcagtacttgatggagtatcagagccagtacatgttcaatgaagtgccgggtgaagcaggagatgatgccatgcagtcttagtgggatattggttacagactttacggttgggttggttttacggttcattatggatacccattggtcttctagatgaataggggtaagcgtaagatgacttaccctgacaaacattgctctgtgggtgcagtaaattgtgttagtgctgtagctagatttaagaattgaatgtatcttgtcttcatcccggtttggagcagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186900, RefSeq:Os06g0186900