Os09g0493800

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Revision as of 07:30, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0493800| Description = Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)| Version = NM_001070083.1 GI:115479908 GeneID:4347450| Length...")
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Gene Name

Os09g0493800

Description

Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10)

Version

NM_001070083.1 GI:115479908 GeneID:4347450

Length

4415 bp

Definition

Oryza sativa Japonica Group Os09g0493800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19779137..19783551

Sequence Coding Region

19779480..19779581,19780190..19780336,19780427..19780507,19780622..19780800,19780931..19781089
,19781265..19781394,19781931..19782090,19782333..19782414,19783087..19783147
,19783269..19783355

Expression

GEO Profiles:Os09g0493800

Genome Context

<gbrowseImage1> name=NC_008402:19779137..19783551 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:19779137..19783551 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtaagggagacggggtactacgacgtgctgggagtgagcccgacggccaccgaggtggagatcaagaaggcgtactacatgaaggcgaggaaagtgcatccggacaagaacccaaatgatccgctcgcggcggcgaagttccaggaattgggagaggcataccaagtactcagtgaccccacacaacgtcaagcgtatgactcatatgggaaatctggtatttcaacggaagcaataattgatccagcagcaatttttgcaatgctgtttggtagtgagctttttgaggattacattggtcaattggcgatggcatccatggcttcacttgatatatttggtgacgaagaagagattgatgcaaggatgttgcaagagaaaatgcgagttgtacaaaaggaaagggaggagaaacttgcagagacactgaaaaacaaattgcacctttatgttcaaggaaacaaagaggaatttgtgcagtttgcagaagctgaggtgtccagactttctaatgcagcgtatggggttgatatgctgagtactattggttatgtatattcaagacaagctgcgaaggagcttggaaagaaagctatatacctgggggttccatttatagctgaatggttcagaaacaaaggccattatattaaatcccaagtaacagctgcaacaggtgcaatagctctcatgcaactgcaggaagacttaaagaagcatcttagtgctgagtgccactacaccgaagaggaacttgaagcttacatggagacccacaaaagtgttatggttgattccttatggaagcttaatgttgctgatatagagggaaccctatcacatgtctgtcagatggtgcttcaagatagcactatcaggagagaggaactaagagctcgagctaaaggattgaaaactctaggcaaaattttccagcgtgttaagcttggttctagtgagggggaggtcacaacaatcaacaatacaataaataattctgatgacaatgatggtagttctcctgattcatcaccaatgtccccaagggagcatccatatgatccaaacccaccgtattaccagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctccccccggtgcacagagggatccaatcccatga</cdnaseq>

Protein Sequence

<aaseq>MVRETGYYDVLGVSPTATEVEIKKAYYMKARKVHPDKNPNDPLA AAKFQELGEAYQVLSDPTQRQAYDSYGKSGISTEAIIDPAAIFAMLFGSELFEDYIGQ LAMASMASLDIFGDEEEIDARMLQEKMRVVQKEREEKLAETLKNKLHLYVQGNKEEFV QFAEAEVSRLSNAAYGVDMLSTIGYVYSRQAAKELGKKAIYLGVPFIAEWFRNKGHYI KSQVTAATGAIALMQLQEDLKKHLSAECHYTEEELEAYMETHKSVMVDSLWKLNVADI EGTLSHVCQMVLQDSTIRREELRARAKGLKTLGKIFQRVKLGSSEGEVTTINNTINNS DDNDGSSPDSSPMSPREHPYDPNPPYYQSPYVEAPQFVGGYPSLNFPMPTAPPGAQRD PIP</aaseq>

Gene Sequence

<dnaseqindica>3971..4072#3216..3362#3045..3125#2752..2930#2463..2621#2158..2287#1462..1621#1138..1219#405..465#197..283#gccagagcagcggttgttgctgtgcttctcctccgcgctccacatcacatcgcatcaccaccgccgcgacgagcagcgtgagatctcggtgccaccgatcgagtcgacgcagaggagagagagatcggggtttggttttttggaggggagagcggagtgtaggaggaggaagaagcgggtgatcgattttgcttcgatggtaagggagacggggtactacgacgtgctgggagtgagcccgacggccaccgaggtggagatcaagaaggcgtactacatgaaggtgatccctcctctctccggcagcttgttcatctttcgtttttggttttggtttgatctcattgtgtttttgctgttgctgatgctggtggtgattggtggttgtttgctggtgttggcaggcgaggaaagtgcatccggacaagaacccaaatgatccgctcgcggcggcgaagttccaggcaagtattggctgcatcatactaatgtgtttccccccttctatgctccagtggattgtgagattaaaccatagccgcagcaacgtgttgcaactcctctgtggctacggtgtctacgctgatcaggaaatagcgtgcagcagtgttgatttagtgctaattttttttggatatagggtgatcatgcattcgtgcttccccatgtggcactcagatgcttcaaaaatgtaggtcttaactttcaggacgtagcggagcctttacatcgttaaatgccctgtgctagcaacgtcgtgcgatgtcctgtgatgatttttgtttctcgtcggaaataaagtatgctagggtggattactgtgaaatttgttcatcctccctagttgtaccaaaggacaaaccatttatgcgatgagtggttcaggaaggggtatgtgtcctgcatgagcatattgctgcgctcatgtaatcgtgcacagtgcatttttgagtaatttttgcaatttattcagcatggcctcagaatagctattctacatgtgtgtagctcattatgtccatattgtcattttgaaaaccaatcaatggtactactaaaactttacacgaaaataaggatgcatgattttttgctcatgtttgttaattgttaatatttggtgaaactgacatcaggaattgggagaggcataccaagtactcagtgaccccacacaacgtcaagcgtatgactcatatgggaaatctggtatttcaacgtaagtctaatcgacaaatacgtccaacggtgttacttatggaaacaattcactaagaaactgaagtcttttgttgttgaagtagtaccgtagttgaccatttacagaaggaaggaatagttccctctctttatcagatgtacttttaacaatggaattggtggtctcatcttgatattgtaggatcttgtaagatgtcgtgatgactaccttctaacctgtttgtcatcaacgttctgtagggaagcaataattgatccagcagcaatttttgcaatgctgtttggtagtgagctttttgaggattacattggtcaattggcgatggcatccatggcttcacttgatatatttggtgacgaagaagagattgatgcaaggatgttgcaagagaaaatgcgagtatggctctttaacaccaagttttatggacatatgcttgacatgctcatcgttgattggaagtttagcaatatttcttctgcctacaagactatgatccccttgtagcttccctgttgtccacctcgcaacctataattttgatgcaacatagttcatttgaataagttcattttacttctctcagtagtctttaattgttaaggtttcatactaaaaaaaggaaagttgaaagttggaatgctataattctttagagttcatctttttttttatgcatttagccttttcaatgccttgataactttcttgcacttccgccccttttccatatttgttgtagagggaatggcccgttataaacttgtcatagccatgaattgaaactacaagttgatctgctggtgattgttagaacttagaatgcaatcgatggtgctgatgtagttgtattctagctatattaaggaaaaatgagtcattcatttagtgctgtagtttgaaatactcatttatggacttaacaataaccacaggttgtacaaaaggaaagggaggagaaacttgcagagacactgaaaaacaaattgcacctttatgttcaaggaaacaaagaggaatttgtgcagtttgcagaagctgaggtgtccagactttctaatgcaggttcttgttcaacccttgaacccccctcccccctcttttttccaccaaaaggaaaaccatgtttgtatctgtgcaacaatgtaataggaaaacctctgatattttatctgcttttaggccaccagctcatttatgaatcacagtcttttcttgtcccattttgctcaccctgcagcgtatggggttgatatgctgagtactattggttatgtatattcaagacaagctgcgaaggagcttggaaagaaagctatatacctgggggttccatttatagctgaatggttcagaaacaaaggccattatattaaatcccaagtaacagctgcaacaggtaaacattgttttatttcattagtttttggttgaattaccacaaatacagatttgaatatatgctacgttgatactagaatatatttgtaatttagtcatgaaatttgatttttctgatatttctgcaggtgcaatagctctcatgcaactgcaggaagacttaaagaagcatcttagtgctgagtgccactacaccgaagaggaacttgaagcttacatggagacccacaaaagtgttatggttgattccttatggaagcttaatgttgctgatatagagggaaccctatcacatgtctgtcagatggtctgtcctcaagtcctggctactttcactattgttacataactgtttttgtattcgtcttacatttcattagcataagttttagcatggttttaaatatttgatcaatatcaggtgcttcaagatagcactatcaggagagaggaactaagagctcgagctaaaggattgaaaactctaggcaaaattttccaggtaccattcttgacatatttatccatgtacctttgattttgaagttgtctagtgtacttccatgaactaagttgggtttttatatcacagcgtgttaagcttggttctagtgagggggaggtcacaacaatcaacaatacaataaataattctgatgacaatgatggtagttctcctgattcatcaccaatgtccccaagggagcatccatatgatccaaacccaccgtattaccaggtgaaaatccctcatctaagtagtaagatcattgatgccacatgcccacagatgtctggtttacaagtcttgcatgacttttataagtggaactatctcggttcatctaaggtttcgttatatgctgctcttaagaaatttttatctagtaatatttttaaatcaatttcataagtgtaccttgtggtgactgaatgaggtcaagttgcattgagctgcacctatagatctccaggcaattaacatgcaaaaccactatgaacacaactatgtctgtggtgccatactgccatgtacagcaatacatttaaccagcagactaatggtaaaattacagtagcagaaaaacagtcattgagagctctgatattaagtagaagtatccatctacaacctgcagtttcagcccacaaattgttttgactgcctgccaatgctaacaaacctgaatgtgccactcatgttgacactgtatactatgaaaaatgattttcaaaccatatgcttcatttctttctgttctttaaattaaggtgtttatttgacatcaaagtttactccatcaaacggaagactgaaacatctgttcctctcgctgtcaatgatagagcccgtatgtggaggcccctcaattcgtcggaggttacccttcactcaactttccaatgccaaccgctccccccggtgcacagagggatccaatcccatgatctatatgggacggacgcggtagtagctttggttccagaaagggtcatcattttgtacaatatttttcttcctcctggtagatggttggtcacattggtcaagatgatttgtgcttattagtcgtagtagagtgctggttgtcctactcctctgcatgctttttttttcccttcagtttcagttgtgtttgtgtcgtgtacaggcaggtgcgcgtgttgtgcaaatagcgctgctgttaaatctgtaatgctgttgctgaggcggcaacagatcggcatttgttgtacatgaacaacaatctccatatgtctatgggtgcataactgtttttgcctatggccc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0493800, RefSeq:Os09g0493800