Os06g0197500

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Revision as of 09:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0197500| Description = Chaperonin Cpn10 family protein| Version = NM_001187723.1 GI:297724576 GeneID:9268607| Length = 8131 bp| Definition...")
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Gene Name

Os06g0197500

Description

Chaperonin Cpn10 family protein

Version

NM_001187723.1 GI:297724576 GeneID:9268607

Length

8131 bp

Definition

Oryza sativa Japonica Group Os06g0197500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4945659..4953789

Sequence Coding Region

4945659..4945677,4948374..4948454,4948952..4949115,4950449..4950604,4950764..4950841
,4952225..4952324,4953773..4953789

Expression

GEO Profiles:Os06g0197500

Genome Context

<gbrowseImage1> name=NC_008399:4945659..4953789 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4945659..4953789 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtctcctacctccatcttcaatggcctcttggactgagagtcccattcttcttgtggggaaaattttgttccagcatagtgtgcaaaaggacaattgagcgggacagagtgcttgtgaagcttggtgctgcagaggagaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggtgaggttgttgctgttggagagggaagaactattggggataagaaagttgaggtcagcttgcagattggggctgaagttgtatattcaaaatatgctgggactgaggtgcaatttaacgacaccaaacatcttattctaaaagaggatgatatcattggtgttcttgagactgatgatgtcaaagatatgaagccccttaatgaccgggttctcatcaaggttgctgaggctgaagacaaaactgctggtggccttattctcactgaaaccactaaggagaagccatcaatcggaacagttgtagccgttggtccaggccctcttgatgatgaaggcaagaggcagccattgtcagtttcagcgggcagcactgtgatgtactccaagtacgcaggcagttgcggtagcggctaa</cdnaseq>

Protein Sequence

<aaseq>MAVSYLHLQWPLGLRVPFFLWGKFCSSIVCKRTIERDRVLVKLG AAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIGDKKVEVSLQIGAEVVYSKYAGTE VQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLIKVAEAEDKTAGGLILTETTKE KPSIGTVVAVGPGPLDDEGKRQPLSVSAGSTVMYSKYAGSCGSG</aaseq>

Gene Sequence

<dnaseqindica>1..19#2716..2796#3294..3457#4791..4946#5106..5183#6567..6666#8115..8131#atggccgtctcctacctccgtatgtattgccgcatctgcccgacgacgcctgaatctgactcctccgtaaaatccggccacatccttggagataatccgaaattaactgatgggttttaatccttatcttctcctctttctgttttcccaagaatcaaagcaaaaccacgtcgtatagatatcggaagtgaaaccatagttttttttagtctaagtcagtttctcttaaaaactgcgcacgcacgcgcgagaggcgagggaaccagaccatatggacgaaaaaagaagtgtgacgaaaggaaaaatacgaatattttaattaagttaagattaagataagatatattattattaggtaggtatagatgtactatggggtgttcttgtggtgtacgtattagggcgtgatctaagcgtagtggacctgaacatgacatgggctattttctaggggaaacgtgacatgggcctaaaaagatctataagggaataggaaatcatggagctatcaaggaggaatcggacagaaaaaatcgcacactacatgtggagggaatcggattaaaaaatcgcaacaatcgcgctatatacggtagggaatcggactcaaaaatcactcgggacgacgtatggaaattcatgggcaaaaacatcttaaacttttataataggaaaagattatatttacaccggttttaaaagataaatgatgctttgtaactaattttgagatttaggaatgcgattcaaactccgacatcaagagaccttaagtgaatttattccattgatgtacttacaagagatggaccaaattaggcattaatttttggaaaataagtttactttagatcccttaagttgtcaccgaattctaaattcatcaatggattgcaaaaccggatactacgcatcccctaacttacaaccaatgcaaatgaggttccttggcagtattgcactcggttttagctgacgtggctcctttgactaggtattcgtcgcacatggcattaacgcgacgcttatgtaacaattcgatccaaataataataataataataaaactcatatggtccacatatcacttacacaaaaaaaaaataaaaaaattgtggtgcccatgtgattccacgtatcatcctcactactacctcttctctctatcctctctctctcccctgcatgttgctgtacacgttggtctggatgatgtaggagtaggactcacccgtccggttgcccaggaactcgaagtccagctcgtcgcgctgcggcgccgtgtccacgtaggagcacatctgcaaccaccgaacatgtacctgtccttcgtctggaacccgacgccgcctgaacaaaaaaccaagaaacaggggagcatcagcactaggcattgccggagctagcttgttcgaatcagagcagctgcatgcgagatcactctcactcaccggtcttttgttgtcgaggtagaggtaccacgtctagccatcggcggaggtcttgacgtaatcctcgatcggctccgccgcagacgccccactaaagcagcagaagcagcagcagcagcacacatcaacaacgatcgtcgccaccatcaacgtacccaccaacccacggccgcatcccccgtgaccccggggttcacgaagcggagcgggcggcggtggacgccgtcgtagttggtgacgacgtagagcgcgggtcgtcgccgtcgcgctccacccgcttcttgacgccgcgcaccccgccgccgagcaccggtagtaattcctcgcgttcggttgaactccgacctcgtcctgactcctgagcccaatcctgctcgtcgtcgctgaggacataccatgccggtcgttattcccgctggccatcaccaccggcggcggctgctgccccgccgctccgccatcacaactgatcattcgtcttattcaagatttttcgtgtaaatataaaaatatttaaatcatgaagttttgatgataaattaaatcacaataaaataagtaataattacattttcttaataagaacgtatctaaaaagtcaataattatcgtcatacagagtatatatatcagatccaccaaatatgccacaaccatttatccctgtttaattgaagaacttgtcaatatgcttttatcaaccatgcatatatattaacaattactccgtaacttcaaagttcgaactaataactaaataacgaaccactttcttgatgtcctccaaatatgtcacactatcatctgctggcaattacttgatcagtcatcacgttccaaatgttttttttcgccggtcaagttctgaatgctacgtacggaaaagaacacgtactaatagaaagcgcgcttccaaagttgcacacaagaaaattttgttttgttgttatttttatggaaggaaaaaactgtaggtgagtatatcctacagcgtaaaaccaaaaatatattaaaagaaacaaaatttacactgtacaataaaaataagtaacaaattctgcagtcgttgttgcatttggggcattgtattatcttttgctctatggataaccatggcaaattcctttttgaaaaggtccaagcaaacttggacgaagtaaggtgagatgtttttgaagatcttatcatttcgtgtgatccaaatgctccaagccataatgattattatctccatgtgaaaggacacttggagtttttcttgcagatcttcaatggcctcttggactgagagtcccattcttcttgtggggaaaattttgttccagcatagtgtgcaaaaggacaagtgagaaagagatgttgctgagtttcttccattcccaagttgcagatgtgaaatgagatgcgtgggaagcgttgaacgtctctcgaggccacacctttgttaatatagatgggaacagcccccattgtggcgtttacaatagatcgatctcaatctcagttgttgctaatcaaccggagagaaaccgtgtacaggagaaaggataggaacaaactctaatgacttatctcctatacatcgggaactactttatctaacaccctctctcaatcacaaccttcctaggttgagattgtatttgaagttttctggaagtcgttctgacaatggtttagtaaaaccatttgcaacttgatctttagtacataaccaacttgcaataatttttgtgctactctctctcgaacaaaatggtaatcagttgctatatgtttagttcttgcatgaaagacatgattgaaggataagtaccttgcacccatgttgtcacaccatagttgagcgggacagagtgcttgtgaagcttggtgctgcagaggagaagactgttggtgggattctgcttccgtcaaccgcacagtctaagcctcagggaggtgaggttgttgctgttggagagggaagaactattggggataagaaagttgaggtcagcttgcaggtaaagttcttctcacaatgagattgcaagtgtacctgtatgatgtctagtactacatttcttaccccatagctcggttgtgagttgcaagtagcagtgacacggcaatttacttgttggttgttgccaactaaatttaaaagcatattgtgtgtgatgccttatcaagaatgcgatgttaatggtgtacggggtctgtgaggctgaagtttctatggcacaaaactcatgtgaaaccaacagaggtttctcatgattgctttatgactgttgttcagagtatgcaacactgatatattttgattgttagtttctggtttggttaaacatatgaatccacgtaaggagtatcctttggcaatgggcaaatatgtatgagcatttgcttaattttgtcatccatacaaatagatgttgttagtctttcatagcactaggagagtaggaggtggtgcatatgacccgggtttgagaaacaacagaaaaccgggaaaaaagaatcgctcaaccctttttttttaaaggactggttcactccctcatgttggtattactagcaacttccatggagaacatttatttagttagtgcctggtttacaagtccaaacccatgatgttttggcatctccatccctcaactagattcactaatgtacatatgaatttggacacatatatgaagcacatacatgaatctattcaaaactcaaaacgtcttataatgtgaaacaaagaaagtaactaggtaaagcggcttctgaggtaatgctgtgtgacttgtttgtttatagttatcttgttgaacagggtacaatttgttctgactgatgggcgaaaaaggctttcaatctctgtttttttttcttagatgcaccttgcaactttatcttggttcctgcatgacaataattgtttgggttcatcatcttgtctactggaaatgtctctaagataaggtttagattggtgaaaaatttactgatagtgatgcttgttacaggaccttagattggtgaaaaatttactgatagtgactcttgttacaggaccttggttattttcatttgttgtgtaactagttttcacttaacttgaatttctgcaaggagatactacattagtaaacttaatttagacaatcatagcgattggcactacagagagcctactgttgaatttcagtgcagcaattgtgctatatattacctgatgaacttggtgcaataagatgttaaagtgccaatctgccaatttgttctgttgcttttatgttgtggtttactgcttatgccttctaatggcagtattaagtgatttatattgttctgtagattggggctgaagttgtatattcaaaatatgctgggactgaggtgcaatttaacgacaccaaacatcttattctaaaagaggatgatatcattggtgttcttgagactgatgatgtcaaagatatgaagccccttaatgaccgggttctcatcaaggtatccatatgttattgttattgcttcttaagatagttgccagtagggttatggtttataggtaatgaaattggagaatgttgaataaattgtacatcttgccgttgtacttcctagacaacctttggtaatgattccctgcttttgtaaatttgacaggttgctgaggctgaagacaaaactgctggtggccttattctcactgaaaccactaaggagaagccatcaatcggaacagtaagttcttaccattgtctctttaagccttgttattgttattctattgctgtgaacctagattgttgggctatatgcaaagatttgtgcatgtactgagccaagcgagaaaatggacatttagccactttcaagaagtggtttcgctgaaatgccattccgaaaacgcgtttcgctaaaatgccaatatgtagcgtgcactcaccgccacttgccattttggccattttgtgcattttcaattgcattttcgctggaatgtggcttgatgggaccaaattgcccttgctcgccggttgaaaggggatcgatccagttcatgggaggaaagaggacgagtgcggcgaggtagtctgcgtggccaaaatggaggaggcggtgagcgaacgcatggcggcggcggtgatgacggcgacacgggcatggcgacgccgcagcgaagggagacgcacggcctccacgccgtcgcggacgacgccctgtccgctgacgaagaagctgacgacagacggccatgaccatctccaggatgccgaacccccaccctcaccagcgcgccgatgtcgatggccaggatgcttgacgaggtggaggtgaggtcgtcgaggtggaggacccgacgacgcttgtagacgaagcggcggcggcggcggcggcgtcctcgaggtcgagcgagtggaggacctggcagcgcttgtagacgaagcggcggcagcagcgtcctcgaggtcgggcgggtggaggacccggcggcgcttgtagacgaagccgttgcagttgcagatctcccagtcctcgttgccgtcgccgccggcggtggaggcgtactaaaatccatgcgctctctctcctctctactctctctttttcgctgagattgatttcgcttgctgtggcggctgggctctgatccgtcgatccgtgcgctcgccggaggaggaggaggatttggggtgtgtgtgtgtgcacggcggtggcgcgcggcgggatgatgctggcggggcacaagttcaggaaggggaagaaggcggtggaggaggaggtgaacgggttcttcatggaggaggaggaggaggtagcggtgtcggacgcgtcgtcgatcgggatggcatcgtcggacagctcgacgggagaaatcgtcgtcggagaaggaggggcattctcgtctcttcaagccgcttcccagagaaaatgatatccaaaatggtgaaaatggcaaagtagctgtgatggcgcactccatattagcattttagcgaaacacgttttcgggatggtattccagtgaaaccatgttttcaaagtggcaaaatgtccattttctccagccaagctgaactgaatttgcatgagttttacctgtttattaccttctgaatgcaggttgtagccgttggtccaggccctcttgatgatgaaggcaagaggcagccattgtcagtttcagcgggcagcactgtgatgtactccaagtacgcaggcagtgagttcaagggagctgatggcaccaactacattgtcttgagagtatcagatgtgatggctgtcctatcttgagctgtgatttgtttcaattttgagttcagaatagacggtagcaggtggtaatggttgccatgtggtgatcttcactctgcggagatgctgtctttgataatcctagaattcgaacgcaacaatttgcagatctcctacgggatcaacattccactgtgactgatttttatttataaaagtttgttttgtttcaaggccttccttcattgcctctttagcccaattttgtctttccactcatcagtgttttcatcggctggtttggcaaaacggtgattgctatttttatcgcttcctctgtgtgcaaatatacgggcatttgaaaattttaaaatttgtttataatttaaattttagactactttgttccattagtctcaatatttttccatcttatttcccaccatctttccattccatttttcttatttaagattaaatttgcagaaatactacagggctgtattcggtttaaatggaacagctgtatgttacgatgatatcactatagtacttaggtatcaaggtatcagatttgatacctacgagatattatatataaatctgatatctacggggtatgtttggtatcaaatctgatacctacgagatattatatataaatctgatatctacggggtatgtttggtatctatctggtacctattcttatatttagggcaagtactatggacatccaagtataagctctaagatgccgcataggactaaatagtgaggtggagaagagaagaaggatgagagagaaataatcacctctcatgcaagaggcagtccctacacaaacttcaataaacatgtgagagtgttagagatactggggattgtgtggtagatgtaacctattatacatatcatctcttaatttaattatctatgtcatgcatgaaattggatgtggtagtcacctctactataaaacttgccctaagaggtgtaaatttaatggttaagctgctactcttatatttaagagaagtgtaaataaaatatatagaactataactctgatggaacccaaacatttttgacacactgcgtccacatgtcaacagcttggttgagatgaaacggtgagctacatttcttagctacgagcctatgacgaaacgatgagccatgccagcaagccatgttatcaccaacactcgaaggtaatgttcgggagcataacgcctcccccatctttaaaatccagtatactcgactcgtttcaaaagcggtttcgtcctacgtggtactcataggatccacatatcagtgaaaaaaaaaaattaacagccccacattccaatcatctcctaatatctttttcctttttttttccctctctctttcttgttctctctccaggttgcggtagcggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0197500, RefSeq:Os06g0197500