BGIOSGA027902

From RiceWiki
Revision as of 17:09, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027902

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027902, complete gene.

LocusTag

B1203H11.6

Ensembl Transcript ID

BGIOSGA027902-TA

Ensembl Protein ID

BGIOSGA027902-PA

Length

3571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:1261894..1265464

Sequence Coding Region

1261894..1261905,1262111..1263286,1263402..1263618,1263861..1264046,1264202..1264411
,1264830..1265464

Genome Context

<gbrowseImage1> name=IndicaChromosome08:1261894..1265464 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:1261894..1265464 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAATGCTGCATAGTTCATTGGGGCCTTGCAAGATGATTGAGGGGAGGAGGCACTCCGTTGACATCCCGATTTCGAGGGCTCTACTGGCCGTCATGAGGTCCAGATCTCTGAGGGACCCTGAGACCAACTCGCTGGCCAAGTTCTCGGCGAAGAAGACCATCTGGGAGGGTTGTTCTCTCGAGGAAGATGACCTGGAGGGGAGCAATTATGGTAGGCACAGCTTTAGTTACAACATGTATGATCATCTCCAGAGGAGGAGGGAGGAGTTTGGGGACAGCGCGAGGTCTGGTCGGCTGGTGAACTCGCCGATCAACATCATCAAGGCCAATGCGAGGGTCAAGGCGGCGCTTCATAACCAGACCTGCTCCTCGGTGATCTCGGGGATGTCAAGGGCAACAAAGGACAGGGCATCCTCTTTGATGATTGAAGGAGAGCAATTGGGTCGGAGGGAGGGAGCTACATTTCAAGAAAGCGCGAGAAGTTTGCTTCAAAAGTACCGGCCCAAGGCTTTCTCTGAGCTGGCTGGACAAAATGTTGTTGCTCAGTCTCTTTCAAGTGCTGTTTTGAAAGGAAAACTTGCTCCAATCTATCTCTTCCATGGTCCACATGGCATAGGAAAGACATCTGCAGCTAGAATATTTGCCGCATCACTGAATTGCCACTCTTCAGGTGGGAACCAGCCTTGTGGGCACTGTGAGGAATGCATGGCCATATTCTCAGGAAACAGTAGCAGTGTGATAGAGATTGATGCTTCTAAACTGGATTGCAAATCTAGAGTTGCTGCCTTGCTGAGGAATGCCTGTGAAGTTCCTGCTTCTTCGCACTTCAAGGTTCTTATTGTGGATGATTGCCAACACATGGATAAGGAGGGATGGTACTCTGTCTACAGTAGCCTTGAAGGCATCCCTGACAGCTCAATCTTTGTGATGATCACATCTGACATTGATAAACTGCCAAGTAATTCAGTTGGATGGTGCCAGAGCTACAGGTTTTGCAAGGTAGACGAAGCAGAGATCGCCCTCCGATTGAGTAGGATTTGCATAAATGAAGGTATGGAGTTCGAGGCCGAAGCACTGGAGCTTATTGCTCGCAAGGCCAACGGTTCCATTCGAGATGCAGTTCAAATGCTTGACCAGCTTACTCTGCTAGGAAAAAGGATCAGCAAATCAGTAACATATGACCTAATAGGCGATGTCTCAGATGAGGAGTTGCTTGATCTTCTTAATCTGGCTTTTTCATCGGATGCTGCTACCATTGTCAGGAGGGCTAGGGAGCTTTTGAGCTCAAAGGTTGACCCCCTGCAGTTATTAGCTCAGCTTGCAAATCTTATCATGGATATTTTAGCTGGGAGGCACCAGTCAGATTCCCAAGAAGTTAGAAAGGTTACTGGTAAACATACATCGGCTGAAATTGATGTGCACAAACTTAGAAATGCACTGGAAATACTTTCTGAAACTGAAAAGCAGCTGAAAACCACAAAGAACCAGTCTACATGGCTTACAGCAGCGCTGTTACAGTTTAATATGAGAGAGCCGTACTGCCTAGATGATGCTGCAGTTTCAAGCATGTTCACAGAGAGTCAGACAGATGATGGGGCTGCTATCTTGAAAGACGAAAGCTTAGATACCAGTTCTCATCTTTGCTATCAGAACAAAATCGGTTGTTTAGATATGAACTTAGGAGATCCAGATGTGCTCGAGACCATATGGATTAAGGCTCTTGAGAACTGCACGTCTAAACCACTTCATAGTCTGTTGAGAAAAGATGGGAAGTTGTCATCCCTGTACACCACTCAAGGTGTAGCAGTTGCTGAGCTGCAGTTCTGCCACCCCGAGGATGTACCTACAACAGAGAGCTTTTGGAATCCATTTGTGGTTTCTCTGCAGAATTTGCTAAAGTGCAATGTGGATATCAGGATCAATCTTTCCCCAATCTCCACCAGCAACAGAGTTGTATCCAAGAATTCATCAGTAAGCCTGGTCATGCAATCCAGAGAAGATCAGGAGACAGAAGATCCAGTTGCCGCAGGTTGCAGAACAGTAGCTTCATCAAGAAAAGAGTGCCCTTCTCCACTCGCGGTGCAACCAAAGGAGAAGCCGTCGCACATTCTGGGGTGCCTCCATGCTACAGATGGCGACGCGGTGGATACCGAGTCGAGGATCTTGAGCTATCAGAAGATTTCAGTCATACCTGAAGCATCCACTCCAGGAAATGGTTCCTTCAAAGCTGGAGGGCACACACCAAAGGTTGACGAAGCCAGAGCTCGCCGAGGCTGTTTCTCGAAGCTTCTACAGCGCCGTGCTGGTGCTCCTTATCAAAATGGAGCTTTGCCTCGCAGGGGACTGTTCAAATGCTGTTTCTGCAAGATCAGACCAGACTGCAAGACGAAAGTGGAAGAAACTGATGGGTTCCAAGGGCACAGTAAAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAMLHSSLGPCKMIEGRRHSVDIPISRALLAVMRSRSLRDPETNSLAKFSAKKTIWEGCSLEEDDLEGSNYGRHSFSYNMYDHLQRRREEFGDSARSGRLVNSPINIIKANARVKAALHNQTCSSVISGMSRATKDRASSLMIEGEQLGRREGATFQESARSLLQKYRPKAFSELAGQNVVAQSLSSAVLKGKLAPIYLFHGPHGIGKTSAARIFAASLNCHSSGGNQPCGHCEECMAIFSGNSSSVIEIDASKLDCKSRVAALLRNACEVPASSHFKVLIVDDCQHMDKEGWYSVYSSLEGIPDSSIFVMITSDIDKLPSNSVGWCQSYRFCKVDEAEIALRLSRICINEGMEFEAEALELIARKANGSIRDAVQMLDQLTLLGKRISKSVTYDLIGDVSDEELLDLLNLAFSSDAATIVRRARELLSSKVDPLQLLAQLANLIMDILAGRHQSDSQEVRKVTGKHTSAEIDVHKLRNALEILSETEKQLKTTKNQSTWLTAALLQFNMREPYCLDDAAVSSMFTESQTDDGAAILKDESLDTSSHLCYQNKIGCLDMNLGDPDVLETIWIKALENCTSKPLHSLLRKDGKLSSLYTTQGVAVAELQFCHPEDVPTTESFWNPFVVSLQNLLKCNVDIRINLSPISTSNRVVSKNSSVSLVMQSREDQETEDPVAAGCRTVASSRKECPSPLAVQPKEKPSHILGCLHATDGDAVDTESRILSYQKISVIPEASTPGNGSFKAGGHTPKVDEARARRGCFSKLLQRRAGAPYQNGALPRRGLFKCCFCKIRPDCKTKVEETDGFQGHSKN</aaseq>

Gene Sequence

<dnaseqindica>1..12#218..1393#1509..1725#1968..2153#2309..2518#2937..3571#ATGGCAATGCTGGTTAGGTAAAACCGCAGGTAGCGATTGTTTCTGCAGATTTTGCGTTGATGGTTTCTCTGCTCCTTGCATACAAGATCGAAAAAAGATTAGTTTTTTTGTGGAGTGTGCACCATGTTTGAAGATTGTGTTGACTGTGCAATGCCTAATTGCACATCCTTTCTCTACTGAAGACTGAATTGTTCCTCGTTATTTATCTGCATTGCAGCATAGTTCATTGGGGCCTTGCAAGATGATTGAGGGGAGGAGGCACTCCGTTGACATCCCGATTTCGAGGGCTCTACTGGCCGTCATGAGGTCCAGATCTCTGAGGGACCCTGAGACCAACTCGCTGGCCAAGTTCTCGGCGAAGAAGACCATCTGGGAGGGTTGTTCTCTCGAGGAAGATGACCTGGAGGGGAGCAATTATGGTAGGCACAGCTTTAGTTACAACATGTATGATCATCTCCAGAGGAGGAGGGAGGAGTTTGGGGACAGCGCGAGGTCTGGTCGGCTGGTGAACTCGCCGATCAACATCATCAAGGCCAATGCGAGGGTCAAGGCGGCGCTTCATAACCAGACCTGCTCCTCGGTGATCTCGGGGATGTCAAGGGCAACAAAGGACAGGGCATCCTCTTTGATGATTGAAGGAGAGCAATTGGGTCGGAGGGAGGGAGCTACATTTCAAGAAAGCGCGAGAAGTTTGCTTCAAAAGTACCGGCCCAAGGCTTTCTCTGAGCTGGCTGGACAAAATGTTGTTGCTCAGTCTCTTTCAAGTGCTGTTTTGAAAGGAAAACTTGCTCCAATCTATCTCTTCCATGGTCCACATGGCATAGGAAAGACATCTGCAGCTAGAATATTTGCCGCATCACTGAATTGCCACTCTTCAGGTGGGAACCAGCCTTGTGGGCACTGTGAGGAATGCATGGCCATATTCTCAGGAAACAGTAGCAGTGTGATAGAGATTGATGCTTCTAAACTGGATTGCAAATCTAGAGTTGCTGCCTTGCTGAGGAATGCCTGTGAAGTTCCTGCTTCTTCGCACTTCAAGGTTCTTATTGTGGATGATTGCCAACACATGGATAAGGAGGGATGGTACTCTGTCTACAGTAGCCTTGAAGGCATCCCTGACAGCTCAATCTTTGTGATGATCACATCTGACATTGATAAACTGCCAAGTAATTCAGTTGGATGGTGCCAGAGCTACAGGTTTTGCAAGGTAGACGAAGCAGAGATCGCCCTCCGATTGAGTAGGATTTGCATAAATGAAGGTATGGAGTTCGAGGCCGAAGCACTGGAGCTTATTGCTCGCAAGGCCAACGGTTCCATTCGAGATGCAGTTCAAATGCTTGACCAGCTTACTCTGCTAGGAAAAAGGATCAGCAAATCAGTAACATATGACCTAGTAAGTTAATCAATCAGCTTTTCTAGCCTTGAAATATTTACCACCATAAAATAAATTGCCTTGTTTCATATTCAGTGAACATACATCAACTTGCTATGCTGTTTTTTTTTTTCAGATAGGCGATGTCTCAGATGAGGAGTTGCTTGATCTTCTTAATCTGGCTTTTTCATCGGATGCTGCTACCATTGTCAGGAGGGCTAGGGAGCTTTTGAGCTCAAAGGTTGACCCCCTGCAGTTATTAGCTCAGCTTGCAAATCTTATCATGGATATTTTAGCTGGGAGGCACCAGTCAGATTCCCAAGAAGTTAGAAAGGTTACTGGTAAACATACATGTATGCTCCTTCCCTCCCAAACAAACTTTAAAATTGTACAATCTACACACGGATTACCTGCAGATCTGTTATTGTTAATGCCGAACATAACACTGCAATATGGAGTCCTTATCTTGAAGATAATTCCAACCTTTAAACATGACATATTAGCTTAGCATTATTATATATGATAATTATTATGCTCACAGTTCACATTAATGTGTCATACACATATCATCTAATCCTGTATCTTAACTTTACAGCGGCTGAAATTGATGTGCACAAACTTAGAAATGCACTGGAAATACTTTCTGAAACTGAAAAGCAGCTGAAAACCACAAAGAACCAGTCTACATGGCTTACAGCAGCGCTGTTACAGTTTAATATGAGAGAGCCGTACTGCCTAGATGATGCTGCAGTTTCAAGCATGTTCACAGAGAGTCAGACAGGTAAATGGCATTCTCTACTTCATATGGTATTACATTAGTGTCAGTTATTTTGTACCCATGGGGGTTAATCTGTTTCCTGTATAATATCGTTATGGAACGAAACTCTGATGACTGAGTCACTTTCTCATGCTCACTGAAAGCTATTTATTATGCAGATGATGGGGCTGCTATCTTGAAAGACGAAAGCTTAGATACCAGTTCTCATCTTTGCTATCAGAACAAAATCGGTTGTTTAGATATGAACTTAGGAGATCCAGATGTGCTCGAGACCATATGGATTAAGGCTCTTGAGAACTGCACGTCTAAACCACTTCATAGTCTGTTGAGAAAAGATGGGAAGTTGTCATCCCTGTACACCACTCAAGGTAATCCATGTAACTGTGTGTTGGATCCTTTTTCTTCTGTTTTGTTTGGGAGGCAGATTCATTTGTCATCTTATCTATAACAAGAACATTTCCATACTTCCTACTATGTTTCCTGCTGATCCATCATACGTCTTATTCAGCCAGTTGATCAATGTTGCTTTCCAGAAAGCACATGTTTGTCTGAACTGATGTATGATGTGTCATGTATAGTAAACAGGTATATCTGTGGATAAGCTAGTGTTCTTGATAAGGTGGCAGATAATTGTCAGTATGCTTTTAACACATATCTTCCCATAGTTCTGTAGTAATTGCCGTTCAGCACTGGCCATGAATCCAAACTGCATGTTAGTAGCATCATTGCATGCCGGCACTGCAGAATTTTCAAGTCGAACTCATTCTGTTTAATTTTGGATTGCAGGTGTAGCAGTTGCTGAGCTGCAGTTCTGCCACCCCGAGGATGTACCTACAACAGAGAGCTTTTGGAATCCATTTGTGGTTTCTCTGCAGAATTTGCTAAAGTGCAATGTGGATATCAGGATCAATCTTTCCCCAATCTCCACCAGCAACAGAGTTGTATCCAAGAATTCATCAGTAAGCCTGGTCATGCAATCCAGAGAAGATCAGGAGACAGAAGATCCAGTTGCCGCAGGTTGCAGAACAGTAGCTTCATCAAGAAAAGAGTGCCCTTCTCCACTCGCGGTGCAACCAAAGGAGAAGCCGTCGCACATTCTGGGGTGCCTCCATGCTACAGATGGCGACGCGGTGGATACCGAGTCGAGGATCTTGAGCTATCAGAAGATTTCAGTCATACCTGAAGCATCCACTCCAGGAAATGGTTCCTTCAAAGCTGGAGGGCACACACCAAAGGTTGACGAAGCCAGAGCTCGCCGAGGCTGTTTCTCGAAGCTTCTACAGCGCCGTGCTGGTGCTCCTTATCAAAATGGAGCTTTGCCTCGCAGGGGACTGTTCAAATGCTGTTTCTGCAAGATCAGACCAGACTGCAAGACGAAAGTGGAAGAAACTGATGGGTTCCAAGGGCACAGTAAAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027902