BGIOSGA027973

From RiceWiki
Revision as of 17:10, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA027973

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA027973, complete gene.

LocusTag

P0025F03.25

Ensembl Transcript ID

BGIOSGA027973-TA

Ensembl Protein ID

BGIOSGA027973-PA

Length

2628

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:2534073..2536700

Sequence Coding Region

2534073..2534376,2535616..2535824,2536062..2536700

Genome Context

<gbrowseImage1> name=IndicaChromosome08:2534073..2536700 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:2534073..2536700 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCGTGACGGCGCGCCGCCGGCGAGCGGCGGCGGCGGGGCGGCGGAGGGGCCGAGGCGGTGCTCGCAGTGCGGGCACCACGGGCACAACGCGCGGACGTGCACGGCGAGGGGCCCCGTGAAGCTGTTCGGCGTGCGGATCGGCGACAAGCCGCCGACCGCGGCCGCGGGCGGAGGAGGAGGGATGAGGAAGAGCGCCAGTATGGGGAGCCTCGCGCAGCTGGCGGAGGGGGGCGGCGGCGGCGGCGGGAGGGAGGAGGGGTACGGCTCCGATGGGAACGACGACAAACGGCGGAAGCGAGGTGAGGCATGGTCAGAAGAGGAGCACAAAAAGTTTCTACTTGGGCTTAGTAAGTTAGGAAAAGGTGATTGGCGTGGCATATCACGCAATTATGTTGGTTCAAGGACGCCTACTCAAGTTGCTAGCCATGCTCAAAAGTACTTCATTCGCCAAACAAATGTGCACAGGAGAAAAAGAAGATCAAGCCTTTTCGATATGGTTATAGATGATTCTGATGACCAACCACTCTCCCGTACATCTTCACAAGAAGTAGAAGTAGAAGAGAATCTAGAAGATGGACATCCTGTTACTGCACCAGTGATCCCACCTGCTCCTGTGCCTATGCTATCATCCTCTTTGGTTCCGCCACCAGTACCAGCAATGGCACCAGTTGCTCCAGGTCCTGTGTTAACATCTGCTTCGGCCACACTACCAGTGTCAGCAGTGGCACCCCAAACCGATGAAAAGGAACAAGTTGCCTCAGGTTCAAATACAACAGAGACAGGGGCTGCAATTCCAGAAGTCATGCCCCCGTATGGTTATCCAATGATGCTTCCTCCATACTACCCACCGGCATTTGTTCCAATGCCCTACTATGGTTATGTGCCTGTTTTCTATGCACCACCAGGAGCAGTGCAAGCACAACATGAGGTTGTCAAGCCTGTGGCCGTGCACTCAAAACCTCCAGTGCACATCGATGAACTCTACAGCATGTCTGAACTCAGCCTGAAGGGCGAGGCTGGTGTGAAAAACGGCACTCCTAATTCTCCGTTGCCTCCAAGACCAATTGGTAGACCAGACAGGCAATCTGCTTTTCATGGAAAAGGACCTTCTGATGGCTCTTCAAATGGACTGATTCCTGCGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTRDGAPPASGGGGAAEGPRRCSQCGHHGHNARTCTARGPVKLFGVRIGDKPPTAAAGGGGGMRKSASMGSLAQLAEGGGGGGGREEGYGSDGNDDKRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNVHRRKRRSSLFDMVIDDSDDQPLSRTSSQEVEVEENLEDGHPVTAPVIPPAPVPMLSSSLVPPPVPAMAPVAPGPVLTSASATLPVSAVAPQTDEKEQVASGSNTTETGAAIPEVMPPYGYPMMLPPYYPPAFVPMPYYGYVPVFYAPPGAVQAQHEVVKPVAVHSKPPVHIDELYSMSELSLKGEAGVKNGTPNSPLPPRPIGRPDRQSAFHGKGPSDGSSNGLIPAK</aaseq>

Gene Sequence

<dnaseqindica>1..304#1544..1752#1990..2628#ATGACGCGTGACGGCGCGCCGCCGGCGAGCGGCGGCGGCGGGGCGGCGGAGGGGCCGAGGCGGTGCTCGCAGTGCGGGCACCACGGGCACAACGCGCGGACGTGCACGGCGAGGGGCCCCGTGAAGCTGTTCGGCGTGCGGATCGGCGACAAGCCGCCGACCGCGGCCGCGGGCGGAGGAGGAGGGATGAGGAAGAGCGCCAGTATGGGGAGCCTCGCGCAGCTGGCGGAGGGGGGCGGCGGCGGCGGCGGGAGGGAGGAGGGGTACGGCTCCGATGGGAACGACGACAAACGGCGGAAGCGAGGTGAGGAATTCTTTCTCTTTTTTTCTTCCCTCCTTTGAATCCTGATTTTCTGTCTTGTTGATTCTTGGCTTGGTGTGGTTCCTGCGTGTCATGGTATTCATTGCAATGTAACAGAGAAGATACCTTGATGAGAAAGATGCTACTAGATTAGATTGTGATTAAATTGCCTGTTGATACGGCAAGTTTTACCTGTGTGCGGATGAACTGTTTTGATGTGGAGGTGTAATTTCGGTGTTTACTGCAAGATGGTTGAATTCAATTGCAGAAATAGCTGATTAGATGTGTGACAACTAAGGGAATTTTATGAGAATTAGCTGGAATAGTGTGACTACGTTTTAGATTGTTGTTGGATTTATGAACTGGGAAGTCTGGCGTGGTTTACTGTTGGGTGTTTAGTGGGTCGTTCCATAATACAGACATGGTCTGGTGTGGTGGTTCTGCAGTTTTTTTTTTTGACACCAGTCTGCAGAAATTTCAGTGATAAACAGCAAGGATTTATTAGCGTGAGATGTAATGATTTTTCAGAGTGCTTCGTCGGTTATAGGATTTTTGATGTAATAAAACAATGGATTATATTATCAATAAGTAAATGTAGTCTTATGAGCACAATTAAGAGATGTCATCATTGTAGCTTGGATGTTTAAGATGGTTGTGTCTCCACGGCGCTGTTTGGCTGCCCTTGCTGCAGCTGCAAGCCGGGCAACAGTGTTTCCTTGCCTGCACTGGCTGCAGCGCAGGCGCAGCAACGCCAACCGAACAGGCCCATGTCTTGTTTAATGATCCATTGTTATAGACTTGTAGATATACCTTTAGAGTGTAGACTGGTGAATCATTTCTTGTATTACTATATGTTCTGATTAAGTATCTAGGGTGCTAATTGGAGATTCTTAAACATTTCTATTTTCCTTCATCTCTCATTGCTATTGAGGCTTGTCATCTGTCACTCTATTTGCACTTAATTGCTCAAATTGTTGTATTACATCCCACAATTAAATTTTTTATTATTGTCCTCTGTTTTGTCTAGTTGGACCATCATGTGCATCCATGTTTTATATGTCCATGAATTCAAAGTGCCTTTTCATAATTTTGTGGTATTGTCATCTTTGGTATCTTTCTTTGTTCAACTGTGTGATTGGTATAGCACATGTTTCTGTTGTCTTTATGAAATTATGCTTGATTTAGCATTTGTTCGAGTATTTACATTTTGCATCAAACAATTTCATTTTGTTCTGCTGATAGGTGAGGCATGGTCAGAAGAGGAGCACAAAAAGTTTCTACTTGGGCTTAGTAAGTTAGGAAAAGGTGATTGGCGTGGCATATCACGCAATTATGTTGGTTCAAGGACGCCTACTCAAGTTGCTAGCCATGCTCAAAAGTACTTCATTCGCCAAACAAATGTGCACAGGAGAAAAAGAAGATCAAGCCTTTTCGATATGGTTATAGATGATGTGAGTATCTCTCCGTCTACTTCCTAGTGTGTTGCCTGCATGCACCATCTTGCAACTCCACTCACGTCAATATAACATGTTTGCTTACTCTTTCATATTTTTTTTCTTAATATTAAGCTGTGGTGTATCTGTAAATGTCACCAAATCATGACATGGCAATTTTTTTTCGAATAAAACCTTGGCAACATTTTTTGACTGAAGTATTTGCTTGTGTTCGTTTTTGTGCTTTTCAACCAGTCTGATGACCAACCACTCTCCCGTACATCTTCACAAGAAGTAGAAGTAGAAGAGAATCTAGAAGATGGACATCCTGTTACTGCACCAGTGATCCCACCTGCTCCTGTGCCTATGCTATCATCCTCTTTGGTTCCGCCACCAGTACCAGCAATGGCACCAGTTGCTCCAGGTCCTGTGTTAACATCTGCTTCGGCCACACTACCAGTGTCAGCAGTGGCACCCCAAACCGATGAAAAGGAACAAGTTGCCTCAGGTTCAAATACAACAGAGACAGGGGCTGCAATTCCAGAAGTCATGCCCCCGTATGGTTATCCAATGATGCTTCCTCCATACTACCCACCGGCATTTGTTCCAATGCCCTACTATGGTTATGTGCCTGTTTTCTATGCACCACCAGGAGCAGTGCAAGCACAACATGAGGTTGTCAAGCCTGTGGCCGTGCACTCAAAACCTCCAGTGCACATCGATGAACTCTACAGCATGTCTGAACTCAGCCTGAAGGGCGAGGCTGGTGTGAAAAACGGCACTCCTAATTCTCCGTTGCCTCCAAGACCAATTGGTAGACCAGACAGGCAATCTGCTTTTCATGGAAAAGGACCTTCTGATGGCTCTTCAAATGGACTGATTCCTGCGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA027973