BGIOSGA028007
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA028007 |
|---|---|
| Description |
Snrnp core sm protein sm-x5-like protein |
| Definition |
Oryza sativa Indica Group BGIOSGA028007, complete gene. |
| LocusTag |
OS08G0154700 |
| Ensembl Transcript ID |
BGIOSGA028007-TA |
| Ensembl Protein ID |
BGIOSGA028007-PA |
| Length |
4117 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:3279991..3284107 |
| Sequence Coding Region |
3279991..3280074,3281409..3281567,3283988..3284107 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome08:3279991..3284107 source=RiceIndica08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome08:3279991..3284107 source=RiceIndica08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGATTTAAGCGTCTTTCATAGAAGAAACAAGTCTCAGGTTAACGAGAAAGACATCATTGTAACCTCCAACTTTGCAACACAGTTGTTCTTCTCCTACTTCAAGGAGCTCGTGGGGAAGGAGGTGACGGTGGAGCTCAAGAACGACCTGGCCATCCGCGGCACGCTCCACTCCGTCGACCAATACCTCAACATCAAGCTCGAGAACACTCGGGTTGTCGACCAGGACAAGTACCCGCACATGCTATCCGTGCGAAACTGCTTCATCAGGGGATCGGTGGTGCGGTACGTGTTGCTTCCCCAGGATGGCGTCGACATTGACATCCTCCATGATGCCACCAGGAGGGAGGCTCGCGGAGGCTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MDLSVFHRRNKSQVNEKDIIVTSNFATQLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREARGG</aaseq> |
| Gene Sequence |
<dnaseqindica>1..84#1419..1577#3998..4117#ATGGATTTAAGCGTCTTTCATAGAAGAAACAAGTCTCAGGTTAACGAGAAAGACATCATTGTAACCTCCAACTTTGCAACACAGGTATTTACATGCCGGGATGCAAGTCTACATAAAATAGTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCCCTCTCATACCCCTTCCTCCCTCCTAGTGGCCGCGGGCCATAGTCGCGTTCTCCACCGCCACCGTCGCCGCTCCCCACCACCTCGTCCTCACCGTCACCGCTGGCGCTGCCTGCCACCACCGCCACCAACGCTCCCCTCCGCCTCGTCCCCATCGGCCACTGCCACCGCCGCCGCTCCTGAGTCCCGAGAGAGAGAGAGATAGGAGGAAGAAGGGAAGGAGAGGGAGGATGACATGTGGTCCCTCATGTCAGTGAGTCCCACTTTTTTTGTGTGAATGACATATGGGTCCCACATATTTTTTTTGTTTTTATTCTAATGCCACGTAAGCGCTACATTTTTTAATTTTGTTTTTGTTCTAATGCCACGTAAGCGCCACGTTGGATAAAGACTTGGTCAAGACCTCCACGTCAGCCAAAACCACTTCCAAAACCACCGAGGGATATTTTTTATTTGTTTGCACCGGTTTTGATAGTTGGAAGTTGGAGGACATGAATCATACTCGGGTGATAGTTGAGGGAGTCAGAGTATACTTTTTTCCTAATAAATAAAGCTATATGGGCCTTTCACCCTAACCCGGCCCATAATAATATGGTTTGGTCCTATCTCATACCCAACACCCAACCCAACCCAACCCAACTCCTCCTCCTCCTCCGCCTTCTCGCGCTCTTCTAGGGTTTTGCCTCCTCCCGATCCGGCTGCCGCGCTTCCATCTCCGGCGGTCCGGTCTATCCTCTCCGCTCCTTGCGCCTGCGCCGATCTCCATCTCGCTACCAGGGGAGGGGGAGAGGCGCTCGCCGCCGTCGTCCTGCTGCTTCTTGGTGAGCATCCGCATCCTCTTTTCTCATTCATCTCCCTCTCTCTCTCCAACCCACCCGCTTTTGTGTCCAATTTGCTTGCCTGCGTTAACCGTAGCTTCTCTTCTAGATCTGGGAGAAGCTGATTTTCTCTTAATTTGATAGCCTTAAACCTTAATAATAGGACTAGAAGTTTTGTTTTTATTTGCCCCTCAAAAATGTTTGGGGATCCCGTCCACTGGGTGCTAATCCTGCCTCTTGCGTCTGCAGATTCTTCGGAGCTAAGGCGGGGAGGGTTCTGCGGCCAGTATGGTAGAATAATTTTTTTAGTTTTTTTTGTTCAACTGCTCGTTGATTTCTTCTCTTCCCACTTCATTTTTTTTTTGTTCTGTTAGTTTGTGTTGATTTTTATTTTTTGTTCTGTTGATTTGGTTGCTGTGCAGTTGTTCTTCTCCTACTTCAAGGAGCTCGTGGGGAAGGAGGTGACGGTGGAGCTCAAGAACGACCTGGCCATCCGCGGCACGCTCCACTCCGTCGACCAATACCTCAACATCAAGCTCGAGAACACTCGGGTTGTCGACCAGGACAAGTACCCGCACATGGTATGCGATGCGATGCGATGCTGCTCTGGTTATCTATCTATCTGTCTGTCTCTGTCCTGGTGAAATATGGATAGCAATTAGCCGCTTGTTTGCATGGGTACTTCTGTAGATATATTGACTCTGCAGCAAACACAGTGTTTCTTGGTTCTTTACGGTGGTCTTCTGTAGATATATTGACTCTGTATGCTTTGTTCTCTGTTCAAGATAGATTTAGGAAGTTTTCATGGTTTTGTACTTCAATATGCATGTGCGTTTGTGCATTTGCTATGGTTTTTCAGTTGATTAATTATTCACTTCTTTTTACCGTGTTTACACATTTTTCTATTCCAAATTAGCTTGAACAACACACATGTACATGTGGCAACTCAGTCAATTTGATAAGGTCAAAATGGTCAAATAGGACTATAACATTTTTTGTAATTACTATTATGTACTACCTCCGTCTTGAAATGTAACTACTTTTGGCTGTGAATGTGGACAAGTACTTGTCCAGAGTCATAACCAAAAGTAGCTATATTTTGACTTAGTAGTATTGAAGAACTTCAAGGGGCTATTCATTAAAATGTAGTTCATGGAGGTGGGGTCGCACTGCCTTCTTTCAAAAGGATTTATACATAGATATTGCTTCATGCACGGTGCTAACCCCGGGCTTGTCAGAATACTATCCTCTGAAGGAGCCCCAATGCCTGTGCTACATCTTCCATGCCATTCAGTGTTGCAGATCATGATGCTTCTTGTGATTGGTCTGTGTCAGATTAATGGATACATTCAAAATCACCTCATTCTACATGATTTCAGATTTCTTCTCTTCTGTTTGCATAGCATGTACTTGTCATCTGTTGATTTATTAATCTGTTAAAGGAGTACCTTTAGCATGATCCTTACATGTTTAGTTAGTGCTGAATGCTGTATCACAATTCAGAATGGTTGCACGTCTGACATGTAGTTGCATAAGTAAAAGAAGTACGATATGGATATGGATCAGGTAACACTCTCCGTTAGTAACTAGGAGCTCCGTCAGTTGGCCAAGAGCTGACTATATCCAAAAATTGATTTGTGGGTAAACTTTTATATGTCTTCTTAGCAACTTAAAAGCCAATGTTGAAAAAGAAACTAAGTTGAAAATACCCTAAAATCAACTCCAAAAAAAAAGTTCTAAAATTCAAATTATGGCAGCAGCTGATTCTTCTTTGGGCATACAGTGAGGCCCAAAATGTCAGTTATAGGATCCCAGTATCCCACAACCAAGAGTATGCATAAGGAAGATAATAATAACCATCTTTATAAACCATAGTAGATATTACTCTTCATTAGATCACTTGTTACTCTCTGTTGTTTTGGGCATGGGCCAGGCCCATGCAGCAGTTTAGGCATGATAATTTAGGAATAGTCAAATAAAGATAGGAGAGTATCTAGTTAGGAAAGAGATGATGTTTATTAGAAAGTTATAGATAGATATTGGATTGGTTTCTGTAGTACTAGAGATTAGTTCCTTGGATGTCAAGTCTATCCTCCTATATATAAAGGGACCCCATATACCCTATAATCAATTAATATCTGAAGTTAGCCCTAAGCCTTAGAGTTCTAATCAATGAGTCTTTCAGCTCAGCAGGGAGAAGTCCTGCCGCTGCTATTAGAGGGCGAGTGCCCTATCCCCTGGTCTTCAGACCCTTACCTTAGCCAATCCATAACACAGTGGTGTGTTGACTCCAATCAATGGTTCTGTAGTAAATGTCCTGAAGTAGTCACCAGCTAATGATAAAAGGCGGTATGTCTAAATGTTTGTAGAACAAACTTTGGGCTACATTGACATGAATTTAGGAATTAACGGGGAGTAGATCATATAGTGGTATACCTAGTTCGTGACATGCCTTACTGGTGCAGAATTAGGAGCTTAAGATGCACTGGTAATTCCAGTGCAAATACTGTTGTAACCATATATCATTGTACTGCTTTTTCCTTTGCCTGTGACATATAATTTTGGGCAAGCACATTACTTGACAGGGACAACCAGTATCCGTACCTAGATATTTATTTGGCCTTCAGTTCCATCCAATGATATTGTATGAAGGGTGTACTTTTGTACTGCATAGGTTACTAAAGATTGCTTGTTAGTTGTTACAAGTACATGATGCCTGAAGTAATCCCAAAGGAAAGCAAAGCTATAGATCAATGTTATATACTGTGTTTTGTAGGTCATGATAGTGATGGAAAGATTCATATCCTTTTGTTATCTTTGCTTGCTGAAACAATCTTCATACTCTCATTGCTTTACCACTTGCACCTGTTAATTTCTATTGTTAAAAATACAACAACGCACCTGTGTTCACTGTTCTATATGGAAGAACTACATTAATCAAGCACTAACACTTTACAAAGAATTCATTTGAGCATGCTGACTCAAGCTTTCGCTCTGGCAGCTATCCGTGCGAAACTGCTTCATCAGGGGATCGGTGGTGCGGTACGTGTTGCTTCCCCAGGATGGCGTCGACATTGACATCCTCCATGATGCCACCAGGAGGGAGGCTCGCGGAGGCTGA</dnaseqindica> |
| External Link(s) |
