Os06g0203600

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0203600| Description = Conserved hypothetical protein| Version = NM_001063621.1 GI:115466973 GeneID:4340426| Length = 4195 bp| Definition ...")
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Gene Name

Os06g0203600

Description

Conserved hypothetical protein

Version

NM_001063621.1 GI:115466973 GeneID:4340426

Length

4195 bp

Definition

Oryza sativa Japonica Group Os06g0203600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5226417..5230611

Sequence Coding Region

5227299..5227819,5227919..5228129,5228563..5228638,5228757..5228859,5229273..5229341
,5229502..5229538,5229629..5229703,5229782..5229833,5229936..5229980
,5230178..5230275

Expression

GEO Profiles:Os06g0203600

Genome Context

<gbrowseImage1> name=NC_008399:5226417..5230611 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5226417..5230611 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggccgatcggttaatgttgtccaatctcgaccatgatttgggatacctacacaagtttccctcagattttccaatgtctcatgatcttgggttgagcttgtttacgcatgccggtacaatggtgggaagttctttgcgacagcacaggcagatctgttcttcaggaaatttgattgttcaggaagcatttgatcgcctcaacaagtttgccagagctttctgctactggctttctagagtgtctaatcccaagaatttacgtaggctaatgagtatggaaggccctagctctggagcttgccagtcacatatcaatcatttgagctcccgtatgcaaaatttggctgtattgcagtttggttatctagtaagagaagagcatgctgtacaactgcttttagctaacttcgcaagcacaacacttgggcgactctggaatgattttcagcagcaacatgcctgcaatgttcttactctggctggtgccatggctattgtaccccctcttgaaaatatatcactgaagacgctcgcagagtcaatggcactgggaaatatcaaggactatgtcagcagacctatggataagccttatctggaggacaaatgcataaaaagtagatctgttgcagtgccaagcacaatatttcagggagatgcaattgaaccaaaaactggaatcaagtttcctgcatttctcgaagatgactccagtccatctacaacggtccttgttgggatgggtttcaaaggtgtgaaagtaatgagggtcaaaaatttggatctgtacgcttttggtttatatctgcaaccgaatactatttctgagaagctgggacctaagtatgcttctgttccaaccatcaacttgaaggacaacccagatttctatgatgatcttttgagggaaaaccttcctatgagagttagattggtacttcactacaacggccttagcattggtgcagtgcgagatgtatttgagaagtcacttggcctgcgcctccagaagatgaatcccaacactgattatcattgcttgaaaacttttggttcttacttcaatgaagacattcctattcctgcgggtacaaagatcgacttctgccaaacttctgatggccagctaataacagaaattgatggcagacaaattggtgctgttaagagcaaagacctctgcagggctctgttcggtatgtacattggcgattcaccggtctcattgcaggccaaaaaagatattgcccaaaacgtagccgggctcataggtaaatgctga</cdnaseq>

Protein Sequence

<aaseq>MKADRLMLSNLDHDLGYLHKFPSDFPMSHDLGLSLFTHAGTMVG SSLRQHRQICSSGNLIVQEAFDRLNKFARAFCYWLSRVSNPKNLRRLMSMEGPSSGAC QSHINHLSSRMQNLAVLQFGYLVREEHAVQLLLANFASTTLGRLWNDFQQQHACNVLT LAGAMAIVPPLENISLKTLAESMALGNIKDYVSRPMDKPYLEDKCIKSRSVAVPSTIF QGDAIEPKTGIKFPAFLEDDSSPSTTVLVGMGFKGVKVMRVKNLDLYAFGLYLQPNTI SEKLGPKYASVPTINLKDNPDFYDDLLRENLPMRVRLVLHYNGLSIGAVRDVFEKSLG LRLQKMNPNTDYHCLKTFGSYFNEDIPIPAGTKIDFCQTSDGQLITEIDGRQIGAVKS KDLCRALFGMYIGDSPVSLQAKKDIAQNVAGLIGKC</aaseq>

Gene Sequence

<dnaseqindica>883..1403#1503..1713#2147..2222#2341..2443#2857..2925#3086..3122#3213..3287#3366..3417#3520..3564#3762..3859#aggaagagcaaaacagagagaggagaggagaggagaggagaggagaggagagaggaggaggaggagcacgcgttcttcgcctcgcctctctcgcctcacgggaggagaggaggagggcgattcggaggagggcggttgcctttgatcccattcccctcccccatcttctcccccgggttcggattcggtcggtcggttggttgatccgcaaccgatcgatcgagggggggtggcactcgcggatcctctcgtgttcttcctccagtgcgctgatctggacacggcgcgatttatagtctatcggccaggtttggatcgttgcgaatgcatccagttcaggagaaattggattttcttttttcctcttttctttttttacgggaatgcttattattgttctccggggcttgtagggcgtaaatttgtgcatttgctggcgtagttacagggtccgattagattgattgaattgatactgtttgtcaatatttgcaaatggtatttgcatttcatataatgggggcattcttagtattcccaaagtaaagttctatttgctgatatgagaacaaagaaagctagtgttattttttatcatttaatcctggcaattgtaagggtaaatttgaaggacaactcattttcaggtccattttcaatagatgatgtgaaatttgttttttttttaaatttcacaaaatatgtatcacctccttattagatgctgtttgtgcaattcacggtgtaaaagaggttttatagctgacttccatagttttgttaaaattttcagatcacaaagtttttcctcgccgtacattcaaaagctttctctgaagactttctacattctgaagattatattgggaataacattttaacatgaaggccgatcggttaatgttgtccaatctcgaccatgatttgggatacctacacaagtttccctcagattttccaatgtctcatgatcttgggttgagcttgtttacgcatgccggtacaatggtgggaagttctttgcgacagcacaggcagatctgttcttcaggaaatttgattgttcaggaagcatttgatcgcctcaacaagtttgccagagctttctgctactggctttctagagtgtctaatcccaagaatttacgtaggctaatgagtatggaaggccctagctctggagcttgccagtcacatatcaatcatttgagctcccgtatgcaaaatttggctgtattgcagtttggttatctagtaagagaagagcatgctgtacaactgcttttagctaacttcgcaagcacaacacttgggcgactctggaatgattttcagcagcaacatgcctgcaatgttcttactctggctggtgccatggctattgtaccccctcttgaaaatatgtaaggcacacagtacgacactttatttgtgccctgctcttgcttgggctctatgcttatatctcactgactgttcatttcactgtatgaattaaaaagatcactgaagacgctcgcagagtcaatggcactgggaaatatcaaggactatgtcagcagacctatggataagccttatctggaggacaaatgcataaaaagtagatctgttgcagtgccaagcacaatatttcagggagatgcaattgaaccaaaaactggaatcaagtttcctgcatttctcgaagatgactccagtccatctacaacggtaatttaccttattttgctgggatactttaccttattttttcaggtactgccttttggtacacttttcttatttgttatgtcgtaaaattattatcatgaatgtcttctctgtgtacctcctctttaataggcgtgcaggctagtcatgtaaaatccaatatacttgtattatgaactggaaatgaaatcctctggattaattcatttctgacaattttgaatcacatagttttattttatgtgttgatttaatatgtatacagaaaattgtacactactacaaatgatctgtggacaattgaattgagttagttcagtttagtcttcattttacatataatgtgatacttctgaactatcagcatatcatttttctctgaattcttagtgtgacgtctccatgtaacattattattgataattaattgcaggtccttgttgggatgggtttcaaaggtgtgaaagtaatgagggtcaaaaatttggatctgtacgcttttggtttatgtgagtaaatattttttgtgcttctattatgttgtttacctgtacattctacaaaaaaatgtttctctgatgttccatcatttctttttaacggtgcaccatgcatttttcttgatagatctgcaaccgaatactatttctgagaagctgggacctaagtatgcttctgttccaaccatcaacttgaaggacaacccagatttctatgatgatcttttgaggtaggacctcgatatatatctccagtcttgtcctgttgttacaattctgcctattcatatgcttagcacacataaatgtggtagtgcttgcaccttttttttggcaactgtttgcacaagtttagtttccctcacaagatccacaggatgtattaaaaattgaactgtttgtgttattgtgctagttgatctacgtacatttcaaaacatgtgtacacacttgtccattcatgtgccatacatatatccatgacattattgatattttgatcttatgaaagtctatatgaatctacttgttatgaaaagtgattcttaacttgatacttcttgtgcatgtgacacttctttccaaaaaaggatgattacatgtgcaccggggactaatgaagttttgtatcttcaatttccagggaaaaccttcctatgagagttagattggtacttcactacaacggccttagcattggtgcagtgcgagagtaagtagtactctcattttatgtttacagagatctgcttgaatgtttctttgatttgtcatgtttgtaaagatctgtttgattgttactttctcataaaaaaaaatgactttagtctattcaagacgtttcattttacctttttgtgtttttctcgcagtgtatttgagaagtcacttggcctgcgcctccagaaggtacttgttggttgctgcttcagctgatacttttaattcttttacgagttcttcatactgatgtgacttctgtatttgtattttcaacagatgaatcccaacactgattatcattgcttgaaaacttttggttcttacttcaatgaagacattcctattcctgcggtaaggttgaacacaggatttggctaccgtatgtttataacttttagatacaagtaaacactgttaatataactgcagggtacaaagatcgacttctgccaaacttctgatggccagctaataacagaaagtaagtaccgtagaccgtaactgaatcttctgtatgtcttgaggagtgagttttctactgccacatccacatattttgacaaaaaaaaacattttcatgcagttgatggcagacaaattggtgctgttaagagcaaagacctctgcagtaagtgtatacttgtcacaccaaaacttatacaaatttacttcattacttcacactttctcaatattttccacccgcttcacttggatcactgtccatgacttgcatctggataagtactttcttgcctagtgcatctttatggtacgataaagttcattgtttttaactgtacttaactcttgcttggtgaacaggggctctgttcggtatgtacattggcgattcaccggtctcattgcaggccaaaaaagatattgcccaaaacgtagccgggctcataggtaaatgctgaagaaactggaaaccaaacgcagctagtcggccaattatttcattcttctatacagtaagaagaggaagcacacattgaagagattaggcgaggatcatagtatgtatatacatcgagagatctgtaacttgtaaagtgaaaaaagaaaaagcaaaatcgtaatgtacatatggaagattagcatctgtttacggcgcaagggcacccattcctttttctatgtggatggatggaccctctgccatttcatacacaggagtgacaggttgtatagtacatgagaaattcagatgcctcttccatgagtataatacaagttctcaaatctttttgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0203600, RefSeq:Os06g0203600