Os06g0206100

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0206100| Description = Similar to Gb protein| Version = NM_001063629.1 GI:115466989 GeneID:4340435| Length = 7434 bp| Definition = Oryza s...")
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Gene Name

Os06g0206100

Description

Similar to Gb protein

Version

NM_001063629.1 GI:115466989 GeneID:4340435

Length

7434 bp

Definition

Oryza sativa Japonica Group Os06g0206100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5358595..5366028

Sequence Coding Region

5358759..5358945,5359579..5359622,5360241..5360367,5360473..5360581,5361533..5362047
,5362755..5363073,5363480..5363744,5363924..5364028,5364134..5364232
,5364746..5365204,5365451..5365786

Expression

GEO Profiles:Os06g0206100

Genome Context

<gbrowseImage1> name=NC_008399:5358595..5366028 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5358595..5366028 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcgggggcagggctggcaccgagaagggggcggcggcggggcgcgggcagacggcgatccagtccaccatccagtctatcaaggaggtcgtcggcggccactccgacgccgacatctacgccgccctccgcgagtgcaacatggaccccaacgagaccacgcagaagctcctcaaccaagatccatttcatgaagtgaaaagaaaaagggacaagaaaagagagagtgctggacagaaaactgttcctgatgcttctgcacaagctgagcacaactcacagtggacgaagccacgcacacaaagggttgagaatgaccaaagaagagcttacagccatggtcaggcatctggtcctaatcgggaatttcgggttgtgagagacagcaggcatggtgtggttgaaaacagaccagagctaggacacaaaggttcaccaaatgtaaaagtgtctgataggagtgtgcctgtagttcaaaccggtcggaaccatcctcctgctacaacttcagaaggccagataacacaaggtgcgaagcacagctacaactctgacgtgcatcaagtgaagagacaggctcagggcactgctcagaaatatgtgaagccacatttgaagaactcccaggatgagcaacaccctcctacttctgatccagctcacacccgaccaaatttgaaagctgctgaaggtgctgttggatccgttcgacgccatgttggagtagttaatgtgcaaaggcaaccatctggccgctcaagttctcacttgcatgtacaaagtggtggttctcacgtaaataatcagcggggaaactttgtcccaggtggaccatctggacgccattttatgtctaaaaacatgcagtccgttcatagaactgctttagattcagtacatcgtggcagatctggtggcagatcttttgttgcctctagtagtaaatatcagcagggtcctgccagcaaccagaaagtcacacagccggcaaaggagtggaagccaaaatcaacaaagaagtcttccaacattgatactgataataacaatggaacagatgtaataacaacttcagctagcaacactgaaaattctaatgtgttggatgagaatgctttgtgtgaaaaaacctctcaagcttgcatacatgaggtggagcatgttattatcccagaacatctccgtgtaccagagtatgagcagacaggattaaggtttggcagtttttcccctggatctggtgcagaccaagtatcaagctcagaaagtccatcggaatctgaagaacaagaacatgtacaagaaccagttcaacttgttgttgaagatgactcattgcgtgctggacatgatgaggtagatgtggaagcaagatcttcacaactcaatctttccacattgacagccgagatatccttgccaccatctgaggatagcgtagaaatgaatggcgaagaggttgagaacgatgatggtcttgggttggttcagagtgatactccacttgcacctgttgatggccaaaatatgcagagtgcctcaaatctgactgcgttttcaacatatggtcatgaagaccctaatatgcatccaagtaatgaggcacagttatacagactagtggaacctaatgtacatccacaagtaatggcatccccttctcaggggtacccttcggaaaatcctgaagcagataatgccgtgcaagtgttcagaataccagaatctaatgtacattcacaagtactcccttccacatctgaggccattagttcacagatcgtgagcagcagccctgttgcaatctctcaacaactgcaacatatgtcccagccacaacaagcagcacagctctaccctcctgttcatatgcaacattatccaaatttcatgccataccgtcatcatatctattctccagtttatgtcccacccatggctatgccaaactttccaacaaatatcccctatccatcaaatggaaacaattatcttcagatgccaggaggaggttcacatttagcagcaggtggcatgaagtatggagtttcacaatataaacctgttccagctggtagcccttctggttatggaaattatactcatccagctggttttacatttagctctcctggtgttggtgttattggaggggctgttggtgtcgatgatgtcaataggatcaaatacaaggataacaacctttatgcaccatccccacaggtggagacatctgatatctggattcagacacctagagagatgccgactttgcagtgtcccccatatttcaatttatcaggtcaagcaacatctggtgcttttgtgccgaatcctgggaatgcatcattcaatgctacagctcaatcctcccatgcgcaattcccaggcttgtaccatgcacagcagccttcgtcaattgtaagtccacatcccatggtgcatcaacaagtccaatcggcaattggtcccaacggtggagttggtgtggctacaccagcccctcaggtaggggcttatcagcaaccccagcttggtcattggagacctggcttttaa</cdnaseq>

Protein Sequence

<aaseq>MAGGGRAGTEKGAAAGRGQTAIQSTIQSIKEVVGGHSDADIYAA LRECNMDPNETTQKLLNQDPFHEVKRKRDKKRESAGQKTVPDASAQAEHNSQWTKPRT QRVENDQRRAYSHGQASGPNREFRVVRDSRHGVVENRPELGHKGSPNVKVSDRSVPVV QTGRNHPPATTSEGQITQGAKHSYNSDVHQVKRQAQGTAQKYVKPHLKNSQDEQHPPT SDPAHTRPNLKAAEGAVGSVRRHVGVVNVQRQPSGRSSSHLHVQSGGSHVNNQRGNFV PGGPSGRHFMSKNMQSVHRTALDSVHRGRSGGRSFVASSSKYQQGPASNQKVTQPAKE WKPKSTKKSSNIDTDNNNGTDVITTSASNTENSNVLDENALCEKTSQACIHEVEHVII PEHLRVPEYEQTGLRFGSFSPGSGADQVSSSESPSESEEQEHVQEPVQLVVEDDSLRA GHDEVDVEARSSQLNLSTLTAEISLPPSEDSVEMNGEEVENDDGLGLVQSDTPLAPVD GQNMQSASNLTAFSTYGHEDPNMHPSNEAQLYRLVEPNVHPQVMASPSQGYPSENPEA DNAVQVFRIPESNVHSQVLPSTSEAISSQIVSSSPVAISQQLQHMSQPQQAAQLYPPV HMQHYPNFMPYRHHIYSPVYVPPMAMPNFPTNIPYPSNGNNYLQMPGGGSHLAAGGMK YGVSQYKPVPAGSPSGYGNYTHPAGFTFSSPGVGVIGGAVGVDDVNRIKYKDNNLYAP SPQVETSDIWIQTPREMPTLQCPPYFNLSGQATSGAFVPNPGNASFNATAQSSHAQFP GLYHAQQPSSIVSPHPMVHQQVQSAIGPNGGVGVATPAPQVGAYQQPQLGHWRPGF</aaseq>

Gene Sequence

<dnaseqindica>165..351#985..1028#1647..1773#1879..1987#2939..3453#4161..4479#4886..5150#5330..5434#5540..5638#6152..6610#6857..7192#aaccactcacccactcctccccctcccgaccaaaacccacgccctagctcgcctcgggcgccgcgcgtcgtttgatgcgatttcggcggcgatcaccaccaccaccaccaccaccacgcgctcctccggcgtagcgttcgggcgatctcgcggcggcggcggcgatggctggcgggggcagggctggcaccgagaagggggcggcggcggggcgcgggcagacggcgatccagtccaccatccagtctatcaaggaggtcgtcggcggccactccgacgccgacatctacgccgccctccgcgagtgcaacatggaccccaacgagaccacgcagaagctcctcaaccaaggtcatccgccttacccccgcccacctcctgatctgggcgtgcttcgatctcgtgaggccgacctagggttttggtcgtgtgatttctccctgcattgggtcgatgtcacggcgcgggtctttgcgtggctcgcggaattgggattggggggctagcgtgctagggttttgtacgatctggggcacctggcgtagttgttgattttgcggttgatttgggatatttggttttatatttctagggcttttatctgctcacatataggtgggttggtttgggccttttagtgtgatagattagtgcttagaaccctgggtttactaatggttttgattaatcaagcggtcaatcacacggatttatctgatacaagggtgttatgtcattttgagtagatgggcgtggtggtactgatactttagtggttttaccaaaagaactgaattgctagtacaaccacttgatgttcttatccccaaaacttagtcagtggggatattgcagcctacaggcatgtcgcattcagcttatttaatatttgtgaagtttccttattattatagatgatgatattatttctgtattaggtatttatcttcatagtctaattcctttcatggtttacatttgcagatccatttcatgaagtgaaaagaaaaagggacaagaaaagagaggtatacatttttgcagttttggactcatgttaatgaggattgagaaatgtctttttactattttcttttggcagtagcccattaactcatagccaactacacaaatagttatgcttcgtatacctttcttatagtcgtaggacaatcattgttgtgacagcaaactacaatgtaaaatttgatcatatacccactgtttttaagattgaaattgaggaattaccctcccgacccacatgcaattaccttagatgaatccatacgtcattggcacaggagagtaaatcctcaatttctaaagggatggtatatgatcaaacctccatttacataccaagatgtagtacgcctgaatatgtgaattcaattgttaatgttaggtttgccataattttacagtgtgtaatttgaaactgagatggattcaaagtctacatcttccatctaattacaatcttattagtttttgaggctcttcatgttacagtttggttgtgttgaatttctttatgcccacatgtgagattttgctccgaatgtgatgtttaatccattgcttaaagtcacacattgctatggatcaccctttttgatcatgcatatctgttgctgttttagagtgctggacagaaaactgttcctgatgcttctgcacaagctgagcacaactcacagtggacgaagccacgcacacaaagggttgagaatgaccaaagaagagcttacagccatggtcaggcatctggtaacacagctgaatctcatggtttgtataatatcgccataagttgggcaatattgagaaaaaaaagtggttacatttctaattgtttgacatggcttaatgtaggtcctaatcgggaatttcgggttgtgagagacagcaggcatggtgtggttgaaaacagaccagagctaggacacaaaggttcaccaaatgtaaaagtgtctgataggaggtatgattgtcgtattgtctggttattttttctcttttgcccatactacgtttggtaccctatgttggctagttttgagacctaatctatatctgggtcaaatcatatgtgagtcatatcatctgtatatttatttgttcattgtaatgtttgtagttgatgtataattgcagagtagtaatattttttatttaaaaaatggcaacattgaagtaaataaagtaccttgtggttagacaatgttggtttgggtaacacctatatacttcctccgtttcataatgtaagtcattctagcattgcccacactcatatagatgttaatgaatctagacatatatatgaatctagattcattaaaatctatatgaatgtggacaatgctagaatgacttacattacgaaacggagggagtatcaagcaacattaaacctttttacttttaccatttccatgtctaacctgatatgctgttttcttttcttgcttggaagattatatactgctgcttcattggttctgcggtgcctttttcaagatctttacttttgctattcttggatgctgtaactactgccttctcttttcttgcatcctaaaatccatgtctcaaccttttcaaaactcgattgccaatattttctggacctatttcgatttgttatatgaaaattgtatatatataaatatcttgatgtaaagttataaaaagtattgccagagtcacatctcaaggaccatatgagtctatgacaagtaaaaaaacatacacacacaaaagaatggatgtactagttagcaaaaattgttttacagccagaactaaaatacttctactggaattggtaaatctttgctgacctaactaaaagaatggatgaccaattgtcttgcatttgtgtgccttgatactaaactaacattttgcttaatgaattgttgttctgtagtgtgcctgtagttcaaaccggtcggaaccatcctcctgctacaacttcagaaggccagataacacaaggtgcgaagcacagctacaactctgacgtgcatcaagtgaagagacaggctcagggcactgctcagaaatatgtgaagccacatttgaagaactcccaggatgagcaacaccctcctacttctgatccagctcacacccgaccaaatttgaaagctgctgaaggtgctgttggatccgttcgacgccatgttggagtagttaatgtgcaaaggcaaccatctggccgctcaagttctcacttgcatgtacaaagtggtggttctcacgtaaataatcagcggggaaactttgtcccaggtggaccatctggacgccattttatgtctaaaaacatgcagtccgttcatagaactgctttagattcagtacatcgtggcagatctggtggcagatcttttgttgcctctagtagtaaatatcagcagggtcctgccagcaaccagaaaggtaacattttcaaagttatttgtgtcattcagttctggttagcaaatcatcaaagttatttgtgctattcagttggttagcaacagtgtatcaaaagtgaccatatttgttttcttgcaatagagacactcaagatttgaagatgaaaagttaacatattcccatatcactccatagattgctcgttcttgttgtttgttggttgctaggactaaattttggctgcttagtagtcagtacttagaagatgagcaattcaaatcatgatgtaggaaaagacagacctgacatcattttgttctgacgtgattctttaatatggtagctcaacgatgaaatttcctttatgaagtgcatatagaaaaataataggacggcctggacgggtatgcatttctctttatgccaataagaaattttggcatgaatcgagaatgaagtaagtgatgtgcatttgttctgaatcactgaaggatattcatatatatttcaattgactgtcttccttgtctacctgtcgcttgttccaatcacctttttacacatttttatcagaaattccgtttggatggctaagtagttcatgtgtagcttacttttcatgttttatattctctgataacatcaattatgaggtctgacatggggtgtttgggccacatcagtgaaattcacattgttatacatgttctctctctcctctgcagtcacacagccggcaaaggagtggaagccaaaatcaacaaagaagtcttccaacattgatactgataataacaatggaacagatgtaataacaacttcagctagcaacactgaaaattctaatgtgttggatgagaatgctttgtgtgaaaaaacctctcaagcttgcatacatgaggtggagcatgttattatcccagaacatctccgtgtaccagagtatgagcagacaggattaaggtttggcagtttttcccctggatctggtgcagaccaagtatcaagctcagaaagtccatcggaatctgaagaacaagaacagttgggtgatcctatgccaatagcgtgaatacagattatctagcaatatatacaactacttaaaaataagtacaagcaaatttgtccattgaaattgcttcattactgcatagaattgacatatgcattctatagctaaaaaaatgttctgtatgctccatttacttttctacctacttatgagttataacatcttattttcttgatattgtcttttggaaatgtaatcatggtgaaatagtgagtattttgaaacctacagtaacttaatgcaatactgcttgttagttgctaaagaaaggctctaatttagcatgccatacctaaatgtggtgtggattttcatatcagagctttcagcattcctgcaaatatggcattgtcttattttctttgttacatgtagtgtacaagaaccagttcaacttgttgttgaagatgactcattgcgtgctggacatgatgaggtagatgtggaagcaagatcttcacaactcaatctttccacattgacagccgagatatccttgccaccatctgaggatagcgtagaaatgaatggcgaagaggttgagaacgatgatggtcttgggttggttcagagtgatactccacttgcacctgttgatggccaaaatatgcagagtgcctcaaatctgactgcgttttcagtaagtcaatgaagaattgttagctatacgggaacacctctactttttagtttgctgattaagatttttgaagaattacttctgttggcatttatttttagattagtatttattttgtaggctgttctttttctgacattctcagatctttgtatgagtaaaactattacttttttcagacatatggtcatgaagaccctaatatgcatccaagtaatgaggcacagttatacagactagtggaacctaatgtacatccacaagtaatggcatccccttctcaggtaaatttaccggtgagttcagttgtacttggttgtcattgaatgcatattctcttgatggaatgctatagcttcctcaccatctgtttccctatctgtaagcaggggtacccttcggaaaatcctgaagcagataatgccgtgcaagtgttcagaataccagaatctaatgtacattcacaagtactcccttccacatctgaggtggcactacttatcatcttgcaaccaacccaatgcttactttcttctgtgctttctttctcattaccttttgcccacccatctgttatttatccttccaggcttctatttctttactcggtatcatgttgcgtagggctgcaaatgaatcaagtttggtcatatttcattggtttaacctgcattgatttataaactggcctgattggactgttttagtttggccagaaggctagttaccatgctcaacatttaatatttcagctggatatggttggacctaaccaaagcataacttatgtccccccttaaaattggtgtatgtcaggttaaccaacaaggtcatgagccttgagcttacctttgttcttttatttaaaaaataataatgttttgttgactgagatcaaatccctggcaacactttatttaacacaatgtcttgagggcaagtactatttgtctcaatgttattgtgacacctgatctcatccatttattcttcttttgcaggccattagttcacagatcgtgagcagcagccctgttgcaatctctcaacaactgcaacatatgtcccagccacaacaagcagcacagctctaccctcctgttcatatgcaacattatccaaatttcatgccataccgtcatcatatctattctccagtttatgtcccacccatggctatgccaaactttccaacaaatatcccctatccatcaaatggaaacaattatcttcagatgccaggaggaggttcacatttagcagcaggtggcatgaagtatggagtttcacaatataaacctgttccagctggtagcccttctggttatggaaattatactcatccagctggttttacatttagctctcctggtgttggtgttattggaggggctgttggtgtcgatgatgtcaataggatcaaatacaaggataacaacctttatgcaccatccccacaggtacaatttatagatgactgaagatcctgctttgtttcaaattgaactatgcacttctgtttaaaataccacaacctactctatttacttaggccactgtggtagtctaattagaacagcaataacttatgaattctgttctacctcttccttacagttcaatagtagttctattttatgctagcgtgccttgatggtatttcctgtacgcattactctattcactaattgggatgctttttacaggtggagacatctgatatctggattcagacacctagagagatgccgactttgcagtgtcccccatatttcaatttatcaggtcaagcaacatctggtgcttttgtgccgaatcctgggaatgcatcattcaatgctacagctcaatcctcccatgcgcaattcccaggcttgtaccatgcacagcagccttcgtcaattgtaagtccacatcccatggtgcatcaacaagtccaatcggcaattggtcccaacggtggagttggtgtggctacaccagcccctcaggtaggggcttatcagcaaccccagcttggtcattggagacctggcttttaaaggtttattaattatctgtaattagggggtcacaagagcctttatgtaacaaaagaggctacttttaacaggaagcacatttgtttttagtgcagctctttctgatctatttaaggtataacagggttttgttagctttcccccaaggtgaattcagtatcccatctgaactggtttgatgtagattgtgagctaaacattggcttagttctttcaagagcacagaagttgaatgccgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0206100, RefSeq:Os06g0206100