BGIOSGA028277
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA028277 |
|---|---|
| Description |
Probable 4-coumarate--CoA ligase 1 |
| Definition |
Oryza sativa Indica Group BGIOSGA028277, complete gene. |
| LocusTag |
4CL1 |
| Ensembl Transcript ID |
BGIOSGA028277-TA |
| Ensembl Protein ID |
BGIOSGA028277-PA |
| Length |
4279 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:9618961..9623239 |
| Sequence Coding Region |
9618961..9620004,9620927..9621125,9622539..9622752,9622893..9622998,9623117..9623239 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome08:9618961..9623239 source=RiceIndica08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome08:9618961..9623239 source=RiceIndica08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAGCAGCAGCAGCCGGAGTCGGCGGCGCCGGTGACGGAGGCGTCGCCGGAGATCATCTTCCGGTCGAAGCTGCCGGACATCGCCATCACCAACACCCTCCCGCTCCACCGCTACTGCTTCGAGCGGCTCCCGGAGGTGGCGGCGCGCCCGTGCCTCATCGACGGAGCCACCGGCGGCGTGCTCACCTACGCCGACGTCGACCGCCTGTCCCGCCGCCTCGCCGCTGCGCTCCGCCGCGCGCCGCTGGGGCTCCGGCGGGGCGGCGTCGTGATGAGCCTGCTGCGTAACTCGCCGGAGTTCGTGCTGTCCTTCTTCGCCGCGTCGCGCGTCGGCGCCGCGGTGACCACGGCGAACCCGATGTCCACCCCGCACGAGATCGAGAGCCAGCTCGCCGCCGCCGGCGCCACCGTCGTCATCACCGAGTCCATGGCCGCCGACAAGCTCCCCTCCCACTCCCACGGCGCCCTCACCGTCGTCCTCATCGACGAGCGCCGCGACGGCTGCCTCCACTTCTGGGACGACCTCATGTCGGAGGACGAAGCGTCGCCGCTCGCCGGCGACGAGGACGACGAGAAGGTGTTCGACCCGGACGACGTGGTGGCGCTGCCGTACTCGTCGGGGACGACGGGTCTCCCCAAGGGGGTGATGCTAACGCACCGGAGCCTGAGCACGAGCGTGGCGCAGCAGGTCGACGGCGAGAACCCAAACATCGGGCTCCACGCCGGCGACGTGATCCTGTGCGCGCTGCCCATGTTCCACATCTACTCGCTCAACACCATCATGATGTGCGGCCTCCGCGTCGGCGCCGCCATCGTCGTCATGCGCCGCTTCGACCTCGCCGCCATGATGGACCTTGTCGAACGCCACCGCGTCACCATCGCGCCGCTCGTGCCGCCCATCGTCGTGGCCGTGGCCAAGAGCGAGGCGGCGGCGGCGCGAGACCTCTCGTCGGTGCGGATGGTGCTCTCCGGCGCGGCGCCCATGGGCAAGGACATCGAGGACGCGTTCATGGCCAAGCTCCCCGGCGCCGTGCTCGGACAGGGGTATGGAATGACTGAGGCAGGGCCAGTGCTGTCAATGTGCCTAGCATTCGCCAAGGAGCCCTTCAAGGTGAAGTCCGGTGCGTGCGGGACGGTGGTGCGCAACGCCGAGCTGAAGATCATCGACCCCGACACCGGGAAGTCGCTTGGCCGGAACCTGCCCGGCGAGATCTGCATCAGGAGGCAACAGATCATGAAAGGTTACCTGAACAACCCAGAGGCCACGAAGAACACCATTGATGCAGAAGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGATCTTCATCGTGGATAGGCTCAAGGAGATCATCAAATACAGGGGCTTCCAGGTAGCCCCTGCAGAGCTGGAGGCCCTTCTCATCACCCATCCAAGCATTGCTGATGCTGCTGTTGTTGGGAAACAAATTGAGCCTGAAATCGGAGAAATACCAGTCGCCTTCGTGGCGAAAACCGAAGGGAGTGAGCTGAGTGAAGATGATGTCAAACAATTCGTAGCAAAGGAGGTGATCTACTACAAGAAGATCCGGGAGGTCTTCTTCGTTGACAAAATCCCCAAGGCGCCGTCAGGGAAGATCCTGAGAAAGGAACTGAGGAAGCAGCTGCAACATCTTCAACAAGAAGCTTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MEQQQPESAAPVTEASPEIIFRSKLPDIAITNTLPLHRYCFERLPEVAARPCLIDGATGGVLTYADVDRLSRRLAAALRRAPLGLRRGGVVMSLLRNSPEFVLSFFAASRVGAAVTTANPMSTPHEIESQLAAAGATVVITESMAADKLPSHSHGALTVVLIDERRDGCLHFWDDLMSEDEASPLAGDEDDEKVFDPDDVVALPYSSGTTGLPKGVMLTHRSLSTSVAQQVDGENPNIGLHAGDVILCALPMFHIYSLNTIMMCGLRVGAAIVVMRRFDLAAMMDLVERHRVTIAPLVPPIVVAVAKSEAAAARDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIIDPDTGKSLGRNLPGEICIRRQQIMKGYLNNPEATKNTIDAEGWLHTGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIEPEIGEIPVAFVAKTEGSELSEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKILRKELRKQLQHLQQEA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1044#1967..2165#3579..3792#3933..4038#4157..4279#ATGGAGCAGCAGCAGCCGGAGTCGGCGGCGCCGGTGACGGAGGCGTCGCCGGAGATCATCTTCCGGTCGAAGCTGCCGGACATCGCCATCACCAACACCCTCCCGCTCCACCGCTACTGCTTCGAGCGGCTCCCGGAGGTGGCGGCGCGCCCGTGCCTCATCGACGGAGCCACCGGCGGCGTGCTCACCTACGCCGACGTCGACCGCCTGTCCCGCCGCCTCGCCGCTGCGCTCCGCCGCGCGCCGCTGGGGCTCCGGCGGGGCGGCGTCGTGATGAGCCTGCTGCGTAACTCGCCGGAGTTCGTGCTGTCCTTCTTCGCCGCGTCGCGCGTCGGCGCCGCGGTGACCACGGCGAACCCGATGTCCACCCCGCACGAGATCGAGAGCCAGCTCGCCGCCGCCGGCGCCACCGTCGTCATCACCGAGTCCATGGCCGCCGACAAGCTCCCCTCCCACTCCCACGGCGCCCTCACCGTCGTCCTCATCGACGAGCGCCGCGACGGCTGCCTCCACTTCTGGGACGACCTCATGTCGGAGGACGAAGCGTCGCCGCTCGCCGGCGACGAGGACGACGAGAAGGTGTTCGACCCGGACGACGTGGTGGCGCTGCCGTACTCGTCGGGGACGACGGGTCTCCCCAAGGGGGTGATGCTAACGCACCGGAGCCTGAGCACGAGCGTGGCGCAGCAGGTCGACGGCGAGAACCCAAACATCGGGCTCCACGCCGGCGACGTGATCCTGTGCGCGCTGCCCATGTTCCACATCTACTCGCTCAACACCATCATGATGTGCGGCCTCCGCGTCGGCGCCGCCATCGTCGTCATGCGCCGCTTCGACCTCGCCGCCATGATGGACCTTGTCGAACGCCACCGCGTCACCATCGCGCCGCTCGTGCCGCCCATCGTCGTGGCCGTGGCCAAGAGCGAGGCGGCGGCGGCGCGAGACCTCTCGTCGGTGCGGATGGTGCTCTCCGGCGCGGCGCCCATGGGCAAGGACATCGAGGACGCGTTCATGGCCAAGCTCCCCGGCGCCGTGCTCGGACAGGTACAATACAAGAAAAATATTTTCCTTTTTTTGGTTGAATTGGTTGTCATTTTTTGTGCGCCGTTGGATCATCCGATGGGCGGCTCGGATTCCATGTTGACTTTGGCGTCTGACGGTCAACGTGTAATCTGAGCCCTCCATTTGGCTGGTGTACAGATCCAATGGCGGGAAATCTTAACGTGTGAAGGACTCAAGAAGCCCTTCTTTTCACGTTTTTATTTAGGTTTTGATACAATATATACACAATAGGCGTTGTTTTTTTTAAAAAATAAACAAAATGGACATTACATTATTGGCTGTGTTTAGATCCAAACTTCAGTCCTTTTCCATCACATCAATCTGTCATACACATACAACTTTTCAGTCACATCATCTCCAATTTCAACCAAAATTCAAACTTTGGATCCAACTAAACACAACCATTGTTATTATTATTATAAACTTATAAAAAGGACATGAAAACAATTAATGAAACTAAGGACAGATTTCATTTCACTGACATGCTTAGAAAGTATAGTTGCCATATCTTTTTAATGTGTGTGTGTGTGTATAGAGTGGAGCTCCACTCCCACACACAAACATGATGGCATGACTATTTAATAAGCTAAGTTGGCTCAAGTCAACATCTGAGGCCAATAATATCTTTCTAGCTAGTTTATCTTTAAAAAAAAATCCTAGCTAACTGATATGATATAAAATTAGCTTGCCATTTACTCAAAAGAAAAGAAGTATTCTTATTCCCCAATGCAATAACATGGTAGTATTATTTTAAATCCCACATACATAGCACTAAATTTACCTTTGGTTTGTTCTATATGACATATATATCAAATTAGTCCTACAAAAATGTTATATTCTAAGCATGTCCAGCTAATTATGCAAATGTGGTGATGATCTTTGCTGCCCACTATGTGGCATTCAGGGGTATGGAATGACTGAGGCAGGGCCAGTGCTGTCAATGTGCCTAGCATTCGCCAAGGAGCCCTTCAAGGTGAAGTCCGGTGCGTGCGGGACGGTGGTGCGCAACGCCGAGCTGAAGATCATCGACCCCGACACCGGGAAGTCGCTTGGCCGGAACCTGCCCGGCGAGATCTGCATCAGGAGGCAACAGATCATGAAAGGTACAGAAGATCCCTGAACATCTTGGCATGTTCAACTGTTGACTTCTCAGTTATGTTTTGCCCCTGCAATAGAGAATGTACTACACTACCACTGGCCCAGATCTCTAGATCAAATCTGACTTGGAAAACATATGATAATCACCAGTGGATAACCAGCTACACAAAAAATTATACTACAAGCCATTGATCTGGATTTCTTTTTGACTATTATTAAACCTGAATTATGACAAGTAGTTGTCTGGAGATGATGTGCAATAAAACAAGGTCAAAAATATGGATGGCCCTCTCTTTCTAATGGAAGTAAAAGAAAGTGTTGCTTTGGAGAAATGATAATACATGTTGTAGTGTTGCTTTTTTATAGGGTCATTGTGCAAGAAGTCCACAGTAGGTAGGATATTGTAATCCTAATTGAGTAGATGCTCCAGCTAGCGAATTATGTTGATGCAACTTTGATGTCAAGATCTCAACTAGCGTGCACTGGCATGTCACATATCCGATGCCGTTGGTTCAAATCATTCCTAGCAATTCCATCGCGCTATTAATGTTCGCCTCCCATCTTTCGCCCTATAACTTTATAAGCCATAGCTGAAATTAAAATTTTGAAAATTAATTTTGGAGTTAATTTTGTTTTTTATGTAGTTTCTTTCCTAGTATTGGTTTTTCAATTGCTAATGGCATAAATATAAAAGTTTCACTCATAAATTAAAACGGGTTATCAGCTCTAGGCCAAACGGTAGCGCTGTTGCCAAACGATATCAATGGAATTATGCGAGTTCTTAAGGCCGTATTCACAATTATAGGTCTTTTTTTTTTTTACACAATTATAGGTCTAACAGAGTAAGGATGTTGCTGTTCGTCATTGTATTAGAGCGGAAGGTCTGAAAGGCTGAAACAATCAAACAATTGTTGTTTAATTTCCACACTACTAATATATGGCGTCCAAGACCTGGGTAAAGTTTAGAAAATGAGAGATGTCAAATTTGTCACTTTCAGTTGCATCACTGCAAATGTACTATTAAATATATATCAGTAGCTAATAGTAATTTTTCAAGTTGCAGTTTAAATGCAAATATTCCCAGCCCAAGTGACTCGCATTCAAAAAAGAAACAGTGACAGTGACAACGAAAGGTCCTTGGAATAATATCAGAACTGAAATTTTATAGCCTCATCGTCTCGCTTATACTCATAAGGGACATGGCTCATTAGTGATTTAAAACTAGTTTGTGGGTATATGTGTTCTTAGTGACTAAAAACAAATGCTAAAAAATAAATTACGATGAAAAAACCATAAAATTAAATTTTAAATTTTAAATTTTTCGCTTATGCTTATGAGTGATCACCTGTATCTAACCACCTATTCGTTGTACTAATTTCCATGAAAATTAACATGCTAAAAAAACCGTTATTTTTCAGGTTACCTGAACAACCCAGAGGCCACGAAGAACACCATTGATGCAGAAGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGATCTTCATCGTGGATAGGCTCAAGGAGATCATCAAATACAGGGGCTTCCAGGTAGCCCCTGCAGAGCTGGAGGCCCTTCTCATCACCCATCCAAGCATTGCTGATGCTGCTGTTGTTGGGTATGTCTTTAACTAGCTCCTGTTCTGAAAATGTAGTAAGGTTTAATTTGCTTGATAGATAATGTTGCAGAGTTTTGACATGGATTTGAATGAATCAGTTCTTGAAATGGCGTTTTCATGATATGATTGGCCACTTGCAGGAAACAAATTGAGCCTGAAATCGGAGAAATACCAGTCGCCTTCGTGGCGAAAACCGAAGGGAGTGAGCTGAGTGAAGATGATGTCAAACAATTCGTAGCAAAGGAGGTAAATTCCTTTACCATGGTTATTCATAGGACAAAAAGAGAACACTTTACCATGGCTGAGTATTGTTTTTTTTTTTTACTTTTCCTTCATTAAATTATTCATTTATATGTGGTTTTAGGTGATCTACTACAAGAAGATCCGGGAGGTCTTCTTCGTTGACAAAATCCCCAAGGCGCCGTCAGGGAAGATCCTGAGAAAGGAACTGAGGAAGCAGCTGCAACATCTTCAACAAGAAGCTTAA</dnaseqindica> |
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