BGIOSGA028346

From RiceWiki
Revision as of 17:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA028346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA028346, complete gene.

LocusTag

OSJNBA0091D16.5

Ensembl Transcript ID

BGIOSGA028346-TA

Ensembl Protein ID

BGIOSGA028346-PA

Length

3239

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:11512521..11515759

Sequence Coding Region

11512521..11512756,11512849..11512894,11515246..11515300,11515386..11515466,11515548..11515759

Genome Context

<gbrowseImage1> name=IndicaChromosome08:11512521..11515759 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:11512521..11515759 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGCCGCCGCCGCCGATTCCACTTCGGCGGTGCCACCCGCCGTGGTGTCCGCCGCCGAGGACACCCTCGCGGCCGCCGAGTCCGTCGGGGACCACCTCGCCGAGATGGTCGCGGCGGCGGGCGAGGACCCCGACGCCATCGCCGAGCTCCCGCCGCTGCGCCGCGCGCGCGCGTTTCTCGCCATGGCGAAGGCCGCCGCCTCCCTCTTCGCAGGCAGGCAGCTCTCGCGGTGTTCGGGAGTTGATCCGGATGAACACCCTATCAAGAAGGAGTTTGAGAGGTTAAGCTTGTGGGAGGAAAAGTTAAATCGATTTGAGGACTGGGACAAGGCACCATTGCGCCCAACCACTACAGTGAATACACAGGCAGCAGCAAGGTTCATTGGTCACTCATTGCCCCATTTGACAACTGATCAGAAGAGGAGCATGCAGGCAATCAGTAGAGGAGAAGGAGGGAGTTACTCTGGGAACAAGAGAAAACCACAACCACCGCGGCCAAATAAGAAGTCTGTTCGTGCTGCCACGGAAGAATTCCTTGCAAAAGCAGCTCTGGAGCTTAGTGGGCATAATGATAGCAAGGTGAAGGGCCCTATTAGGCTCCTCTCTGATGAAGATGAGGACTAA</cdnaseq>

Protein Sequence

<aaseq>MATAAAADSTSAVPPAVVSAAEDTLAAAESVGDHLAEMVAAAGEDPDAIAELPPLRRARAFLAMAKAAASLFAGRQLSRCSGVDPDEHPIKKEFERLSLWEEKLNRFEDWDKAPLRPTTTVNTQAAARFIGHSLPHLTTDQKRSMQAISRGEGGSYSGNKRKPQPPRPNKKSVRAATEEFLAKAALELSGHNDSKVKGPIRLLSDEDED</aaseq>

Gene Sequence

<dnaseqindica>1..236#329..374#2726..2780#2866..2946#3028..3239#ATGGCCACCGCCGCCGCCGCCGATTCCACTTCGGCGGTGCCACCCGCCGTGGTGTCCGCCGCCGAGGACACCCTCGCGGCCGCCGAGTCCGTCGGGGACCACCTCGCCGAGATGGTCGCGGCGGCGGGCGAGGACCCCGACGCCATCGCCGAGCTCCCGCCGCTGCGCCGCGCGCGCGCGTTTCTCGCCATGGCGAAGGCCGCCGCCTCCCTCTTCGCAGGCAGGCAGCTCTCGCGGTGACCCCCTTCCCGTTATGACTGCGTGACCCGCATCGCTTCTGACCAAATGTTTTTATTACTATTATTATTATTGTTGCAGTGCGGCTTAGGTGTTCGGGAGTTGATCCGGATGAACACCCTATCAAGAAGGAGTTTGTAAGCTCTCTCTCTCTATATATATATACTCCTGCCTAGAATCCTATCTACTTCTATATTGTTCTCACATTCTATAGTAGTAGAAATTCGGTTTCAGATTTGCCAATAAGAACAAAAGTTTGGGTGTATCCTTATATAGGTTTCTAATTTATGTTAACAATTTCTAATCGGGAATCTTTGTACCATGCCATATTATTGTAAAGACGAGTCATGGACTTATTTTATACCCTGTTTTTAGACAAAGGCAAACCACCCTGCTTTCATCCCAAGCAAATAACGAGGTTCGGCACAGTAGCATCAGAGAAAAGGAAAAGGAAATAGCTGGTTTTACCAGTGCCCTATAAATCATAGTAATAACTAGTAAGTTCAATCTTACAACTACCATTATCAAAGCATATCACACAGTTAAGTCACCCCTACAGCTGTCTTTAAAGTGGTGGACTGAAAGCTCATTTAGCCAGCTCGTTTGCTCGGCTCACAGCAGCCCTGATTATACTCGTTTATATTCCACAATAAATCAGTCGATGTTAATTTTTGAAAGTAGACTCTCAAGGAGGGATTGATTGGACTAGGATGGCGCAATCTTTATTCTTTAAAGGTGATATCTCCTGATTATGCTCTGGAGGCCGCGAAACCAACCAGCCATAAATATATCTCACTCGAAAGAAACCATGTAGTTTTGCATGCCTTTTCGATCTTGTTTGTACTGCATGTATGCTCGCTCCCCTTGCATCCTTCCGGTTCCCACATGCAAAATCACATACAAAAACTGTTTGCACCATAGCTCAGTGGAAAGATGTCGTGACGGTGGATACCCTCCTGTGGCATGTGCACAAGAATTGAAAGAAATACTCAAATAATCAGTAGGATAATTTGGGATGTATCAGTCTGATCGTTATCTCATTTCTAAATTTGCTACAATGATAATAAATCAAAATAAGTAAAACACAGTGCAAAACTAAGAAAAGTAAAGTTGATCCAATATACTCCCTGATCTTTGAACTCTTGTAGCCATTATTGCCCTTTGCCCTTTGATTACTTCCATATTATTTTGCCTTTCTTGATGTAGCAATTACCTCCAGTTTTGTGTATTGGAATTTAGAAAGAATGTGTACGATAAGTTCCTGCCTGAGGAAAAGGCTGCTTTCAATTTCCATGATCCCTTGCCTTATAGATTGTAAAAGAAACAGCTGCAAAAGAAAATAGTGTAAGATGATAAACAGATTCACCCCCATTTTTCATTCACATATATAAGGTGCTAGAGGTTTGGCATGGCCGTGAATCCCAAGCAACTAGTGAGCATATTACATAAAACTTACACAATAGAACACTAAAATAGCAGGCACAAGAGCCCCCAAGTACAGTTAACCACCCAATGCAGCATTTAATGCATAATCGGGGTGGCTACCTGGCGCCTAGCACCTAGGGCCAAGTTTTGAACACTTCATTCACTTATACAAAAGATGTCAAATAGAAGTTGACATCCTGTCCCACTCGAGAGCCTCTATAGTAATCCAGACAAAGGTAGCTAAGAGACAGGATGACAAAATATTAATACCATCCTCCATACCTGAATACAGCATGCACTTTCCTGGCCACAAAAGGAACAAACTTACTTCCATGGGATATTGCTTTAACAAATCCCTTCATTCTTGTGTTTCTCACACACCAAACCAATTTTTTTTTCAGTATAGCCATCTAGGAATTAATTTTACTGATCTGTCCAGGGTGTAGTGAGCCACATCCTGTTCCTGATCAAGCTGATCAGGGGATAACAAGATGCAAAAGCTAACACTATAATATACTGGATTTTCACTTTGTGCACTTCTTCCCAAACTTGTGTGCCTCCCATAGGATCAGTGCTGAATAAGTTTTTCCCTTGCTGGTATTGTGTACTTCCTTTTATCCTATCTAATATCTGAAGCAACTTAACTGAGCTACCTTCTATAATCCCATATCCTGATATTCATACTTAGTAGGCACAAATTGATGATCCTGATATTTAAGACTACCACTCTACAATCCTTTGGCAGCTTGAACATTAAATCATCCATGCTCTATGCTCATTTCACGAATTGTTATCCAGTTTTTCACCTGATTTTGGCTAGAGCTTGTAGGTTTGTAATTCCACTCGTTTATATTAACTTCTAATATGGTTTTATAACTTTGGTGTTCCTGGGGCAGTAATGCAGTTAAAGATTGAAGTCTTGGATAGGGAAGATTTGATTTTATTCTTAGTTAGAAATTTTGCATGGAACAATCTAAAATGGAAAATCCAATCAATATGTTTTTTCAATTCCAATGCTGATACTGTCAGATGTTTAGTTCCACTTCTGCTTCATTTATTTCAGGAGAGGTTAAGCTTGTGGGAGGAAAAGTTAAATCGATTTGAGGACTGGGACAAGGGTACTTGACAACTCATTAACTATTGGTGGAAATATCATATCTATGCACACGTATACCAAATTACTGCTTGTGTTCTGAATTGCAGCACCATTGCGCCCAACCACTACAGTGAATACACAGGCAGCAGCAAGGTTCATTGGTCACTCATTGCCCCATTTGACAACTGGTACATAATTGTTTATTGAAAAGTTTTACGAACGGTTTGGTTTTTTATGGTGTAGTGTTGAGGTTTCATTTGCTATTTCAGATCAGAAGAGGAGCATGCAGGCAATCAGTAGAGGAGAAGGAGGGAGTTACTCTGGGAACAAGAGAAAACCACAACCACCGCGGCCAAATAAGAAGTCTGTTCGTGCTGCCACGGAAGAATTCCTTGCAAAAGCAGCTCTGGAGCTTAGTGGGCATAATGATAGCAAGGTGAAGGGCCCTATTAGGCTCCTCTCTGATGAAGATGAGGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA028346