Os06g0208700

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Revision as of 09:09, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0208700| Description = Putative tyrosine phosphatase family protein| Version = NM_001063639.1 GI:115467009 GeneID:4340447| Length = 4042 bp...")
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Gene Name

Os06g0208700

Description

Putative tyrosine phosphatase family protein

Version

NM_001063639.1 GI:115467009 GeneID:4340447

Length

4042 bp

Definition

Oryza sativa Japonica Group Os06g0208700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5554008..5558049

Sequence Coding Region

5554123..5554433,5554567..5554660,5557251..5557308,5557398..5557441,5557550..5557723

Expression

GEO Profiles:Os06g0208700

Genome Context

<gbrowseImage1> name=NC_008399:5554008..5558049 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:5554008..5558049 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagctggaggtgatgccgaagcagagggccatggaggccgagcagagggaggaggccatggagatgagcgggctcgagctgtggaagcacgagaagcccgcgtccatggtggtgttcctcccgccgccgccgccgccgccgccgcttgtgccggcggcggcggccgcggccgcggcggcgtgtggtgaggaggcgacgctggtgccaccgctcaacttcgcgatggtcgacgacggcatcttccgctccggcttccccgcggccgccaacttccggttcctcaagtcgctcaacctccgctccatcgtgtacctgtgcccggagccgtacccggagacgaacgcggagttcctcgccaagaacgggatcaagctccaccagttcggaatcgaggggcgcaaggaaccattcgtcaacatccctgacgacaaaattcgagaggcgctcaaagttgtcctagacgtaaaaaaccaacctctgcttattcactgcaagagaggcaagcaccgcaccggctgcgtcgtggggtgcttgaggaagcttcagaaatggtgcttgtcttcagtgttcgacgagtaccagcgcttcgccgctgcgaaggcgaggagcaccgatcagagattcatggagctgttcgacatctcaagcttgaagcacctgacagcttcacattgttaa</cdnaseq>

Protein Sequence

<aaseq>MKLEVMPKQRAMEAEQREEAMEMSGLELWKHEKPASMVVFLPPP PPPPPLVPAAAAAAAAACGEEATLVPPLNFAMVDDGIFRSGFPAAANFRFLKSLNLRS IVYLCPEPYPETNAEFLAKNGIKLHQFGIEGRKEPFVNIPDDKIREALKVVLDVKNQP LLIHCKRGKHRTGCVVGCLRKLQKWCLSSVFDEYQRFAAAKARSTDQRFMELFDISSL KHLTASHC</aaseq>

Gene Sequence

<dnaseqindica>116..426#560..653#3244..3301#3391..3434#3543..3716#acgcacaacaccacagcgctcatacccgctgcgcacacaaatccgcctcctcttccgctcgaatttacgattctgcccccctccgctccaccgcgcgaaggcgaagccggtagccatgaagctggaggtgatgccgaagcagagggccatggaggccgagcagagggaggaggccatggagatgagcgggctcgagctgtggaagcacgagaagcccgcgtccatggtggtgttcctcccgccgccgccgccgccgccgccgcttgtgccggcggcggcggccgcggccgcggcggcgtgtggtgaggaggcgacgctggtgccaccgctcaacttcgcgatggtcgacgacggcatcttccgctccggcttccccgcggccgccaacttccggttcctcaagtcgctcaacctccgctccatcgtgtgaggaatttttctctctctctctctctagctagctacctcgtctgttgcatctaggggttgggttgggttgggttgcttcgcgggtgtgtggcgcgtgttcgtgtggttctgacgagggtgacgtcatcaggtacctgtgcccggagccgtacccggagacgaacgcggagttcctcgccaagaacgggatcaagctccaccagttcggaatcgaggggcgcaaggtaaacgaaacatggaaaaaatttgagttatctttcgttgtcaattccgattcttactagaatcatataaaaccggttcatgttttccaataacgtatcgtcgtacggtttgatcatcgcgttgttcactcctgattggtagtgctgccactggcggtgattttgggggaagaattcgattcgtttgtgaatttattaatcatcaactgaatttccaaaaagggccccttcggctactcgcctaggctcctagttgttcgttgtaacgctggggaattttcattatctaaaaaagacctgctgaattttcaaatttcacggcgaatcggcagtggtccctgtcagcattgttaatcaagccagctgtgcggtggattttaaacaattctttttccagtattccgatttttttttatttgcgtgatcctgcaattacaaggctatcagtgagtgtgcatcatatcatcccttttggcagacagcatcttctctgtacaggaggtgcctgttcgtttctcttctttgttctgtttcttgtttgaatgatttcttcactgttctgataggtaggtaaattgtggaattactctgacacatgaattttcttgttgtggattcagggtgagcagcttaagttcctgttcatgtcctacttatctgctcaccgtcctgttcataccctatgttcttcagaacttgttggttttcgttggcagctttaatgatcccaacagtatatacaattttagccaatgttatgattcttttgattatgttaaatatgcattattgcaaaaaaaaagacagtttgtgaaagttttacgaatttaaaatcttgtcaaagttgtttgagtaaacttcttggtcaatgcagaattttgagtaatccgcattgggcttactaagctgtcaaagctatctgcagatagtgtccatttagcttcttgaggcaagttgcatgaaatggagttgtagttttccgctacacggatggcacctaagaatagatataatagattgcatgcccatatccacacattgtgctgtccaatatcttgtttggttgtttgccggacctatcttgttttgttgttgatgggagcactaacggtctggatctgtctccgttttttgagaactgtaattttgtgctagatacaaaaatggggagatgaacttgataattcttactggagagatactgattttcttttatgtactatatgtttgccgttaatttatcagttggatcacctcacatgcctgtggtcgtcaagcagcaatgggtctaagcactgggaataactttagctttatttcttgctgtactgtcaacacatggcttccatatattccccaatttcccactgaagtagctgtggatcttgtctatgtgtcttggttgccctggatgtaagatgtcatggtatgagtaaaatgtacatgattttgtaccttaattggaaatatgtttccgccacatgtagaaggctttgataaaaaaaaaacaaacatgtagaggcccaataaattatcaatatgtaaaacttcataattttgtcaacatttttaatgagaagattttggaaggcatcttagctgacaagttttcgtacagctttacctgtggatgattttgagttgttattttcggagtttactaatttacaacttggttatgcactactcatgaaattaatatacccaaattaggcaaatatgtatacagttacgcctcagattttctgagtgccattgttgagtttgtggtttattggttttctgtactggtcaagatcagttatctagtagtgtttgattttttctttcacccttcttgctttagctttatgctataaatactcaaaagcaaatgtcccattcattctttttttttttcaaattttgacatcatcgatgacctaactgaagttgagtagattgtcatttatatgaaccggcaaccttgtggtgtatgagtcatagttgctgtccataatccacagtttgctctgtgttggcactgtctgaccattttttgcagaagccatgagcaggaattcccaatgaactcgataggaattcttgatgcagggccactaggattttttttttactaacagggccactaggatggttgacctaattccaaatcctactttattttcgttagaaaaacaatgaaatctcttagatttagcaaagttgctttttttctctccattaaaaaaataggccctgttgctgaaattcactcaaggaaggaaactaggggactcataaaatagttcactgtcagagttttataggaattgaccatcttgtatttcttctgatctgcgttgaccttggtgcattttctccagtgacatggccaaccttactgaaaatgataaccttgttcctgacactttgtataaaatgttttaaatgtaaaatatttaggattatgcaactatgtgcaccacatatcacttataaatatgattcttgtcacaacaattcattatgcactctgttttttcttagtctgaaaacctgatatctccacagctgatgactgacaacatctgaactactgttgctacaggaaccattcgtcaacatccctgacgacaaaattcgagaggcgctcaaagttgtcctaggtactgcaattatctaactctcctcacatcgcacgcttgcatcacaacatttcagacctctttaactcctgttgcttttcttgatacagacgtaaaaaaccaacctctgcttattcactgcaagagaggcaaggtaagcttaatcagttcccacactaaactctgcaattgctgccattatcttccaaagcaagaactctgagatcctaaactgactgctccaatgtttccctatcttcagcaccgcaccggctgcgtcgtggggtgcttgaggaagcttcagaaatggtgcttgtcttcagtgttcgacgagtaccagcgcttcgccgctgcgaaggcgaggagcaccgatcagagattcatggagctgttcgacatctcaagcttgaagcacctgacagcttcacattgttaaccaagagcgtgcgattcgcgctgtctcctcctctttaagtcctagcaaatctcccaaacctatgatcttctccctgcagctactgaatttgattcagcagtgaataattttggaacccgtagaatgaaccccgtaaaaaaagaaaatgtttgtaattgagttgagagttctagttttctcctgcttagctccctgcagatcctatgaaccagacagttgtgggtaggattgcaagaggttttttccccatttttttttctggtaactcttgcgaggaattcaccaattgttttcgggtactgaaagctgtactcgagcagcattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0208700, RefSeq:Os06g0208700